Documentation/4.8/ModuleExtensionListing/Modules by contributing individual

• Modules by contributing individual

Modules by contributing individual

247 contributing individuals:

• '
• )
• A
• a
• Adam Rankin (Robarts Research Center, Western Universit)
• Akila Viswanathan
• Alan Morris (Utah)
• Alec Robinson (PerkLab, Queen's University)
• Alex Yarmakovich (Isomics)
• Alex Yarmarkovich (Brigham & Women's Hospital)
• Alexis Girault (NIRAL, UNC)
• Ali Ghayoor
• Alireza Mehrtash (UBC/BWH/SPL)
• Allen Tannenbaum (Stony Brook University)
• Alvaro Gomez (Facultad de Ingenieria, Uruguay)
• Amani Ibrahim (PerkLab, Queen's)
• Amelie Meyer (PerkLab, Queen's University)
• Analysis Laboratory
• Andras Lasso (PerkLab, Queen's Universit)
• Andre Mastmeyer
• Andreas Freudling (SPL, BWH)
• Andrey Fedorov (SPL/BWH)
• Andriy Fedorov (BWH)
• Andriy Kot (CRTC)
• Aniqah Mair (Queen's University)
• Anonymous
• Antonio Carlos da S. Senra Filho (University of Sao Paulo)
• Antonio Damato
• Applied Chest Imaging Laboratory (UCC))
• Arie Nakhmani (UAB)
• Atsushi Yamada (Shiga University of Medical Science)
• b
• Beatriz Paniagua from Department of Orthodontics (UNC)
• Benjamin Long (Kitware)
• Bill Lorensen (Noware)
• Brad Davis
• Bradley Lowekamp (MSC/NLM)
• Brian Zenger (CARMA)
• Brigham (UCC))
• BWH
• C
• Carl-Fredrik Westin
• Casey B Goodlett (Kitware)
• Charles Marion (Kitware)
• Christian Bauer (Univ. of Iowa)
• Christian Baumgartner
• Christian Herz (BWH)
• Clement Mirabel (University of Michigan)
• Csaba Pinter (PerkLab, Queen's University)
• d
• Dan Marcus (Washington University in St. Louis)
• Danfeng Chen (Western University)
• Daniel Blezek (GE)
• Daniel Haehn (SPL, BWH, UPenn)
• Danny Perry (Utah)
• Davide Punzo (Kapteyn Astronomical Institute)
• Demian Wassermann (Brigham and Women's Hospital)
• Dirk Padfield (GE)
• Dominik Meier (SPL, BWH)
• e
• er (KGH, Queen's University)
• Erich Bremer (Stony Brook University)
• Ethan Ulrich (Univ. of Iowa)
• Eugene Kholmovski (CARMA)
• Fan Zhang (Brigham & Women's Hospital)
• Fotis Drakopoulos (CRTC)
• Francois Budin (NIRAL, UNC)
• Franklin King (PerkLab, Queen's University)
• g
• Gabor Fichtinger (Queen's)
• Gopalkrishna Veni
• Gr (The University of Western Australia)
• Greg Gardner (Utah)
• Greg Harris
• Greg Sharp (MGH)
• Gregory Sharp (MGH)
• Guido Gerig (UNC)
• Guillaume Pernelle
• Guillermo Carbajal (Facultad de Ingenieria, Uruguay)
• H
• Hans J. Johnson (hans-johnson -at- uiowa.edu, http://www.psychiatry.uiowa.edu)
• Hans Johnson (SINAPSE)
• hans-johnson -at- uiowa.edu
• http://www.psychiatry.uiowa.edu
• i
• Ipek Oguz (University of Iowa)
• Isaiah Norton (Brigham & Women's Hospital)
• Isomics Inc
• Ivan Kolesov (Stony Brook University)
• Jaime Garcia Guevara (Queen's University)
• Jaime Garcia-Guevara (Queen's University)
• Jan Egger
• Jayashree Kalpathy-Cramer (MGH)
• Jayender Jagadeesan (BWH)
• Jean-Baptiste Berger (Kitware)
• Jean-Baptiste VIMORT (University of Michigan)
• Jean-Baptiste Vimort (University of Michigan)
• Jean-Christophe Fillion-Robin (Kitware))
• Jennifer Andrea (PerkLab, Queen's University)
• Jessica Forbes (SINAPSE)
• Jessica Lee
• Jim Miller (GE)
• Joel Saltz (Stony Brook University)
• Johan Andruejol (Kitware Inc)
• John Buatti (Univ. of Iowa)
• John Doe (AnyWare Corp.)
• John Evans (MGH)
• Jonathan Bronson (SCI Institute)
• Jorge Onieva (jonieva@bwh.harvard.edu)
• Jos Roerdink (Johann Bernoulli Institute)
• Josh Cates (Utah)
• Juan Carlos Prieto (UNC)
• Julia Lopinto (University of Michigan)
• Julien Finet (Kitware)
• Julien Jomier (Kitware)
• Juliette Pera (UNC)
• Junichi Tokuda (BWH)
• K
• Kent Williams (UIowa)
• Kent WIlliams
• Kevin Alex (KGH, Queen's University)
• Kevin Wang (Princess Margaret Cancer Centre)
• Kilian M Pohl (SRI/Stanford)
• Kilian Pohl (UPenn)
• Koichiro Murakami (SUMS)
• Kyle Sunderl (Queen's University)
• L
• Lauren Barber
• Lauren J. O'Donnell (SPL, BWH)
• Lauren O'Donnell (Brigham & Women's Hospital)
• Laurent Chauvin (BWH)
• Liangjia Zhu (Stony Brook University)
• Luca Antiga (Orobix)
• Lucie Macron (University of Michigan)
• Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• Marcel Prastawa marcel.prastawa@gmail.com
• Mark Scully (Uiowa)
• Markus Van Tol (University of Iowa)
• Markus van Tol (Univ. of Iowa)
• Martin Bertran (Facultad de Ingenieria, Uruguay)
• Martin Styner (UNC)
• Mason Winsauer
• Matt Lougheed (PerkLab, Queen's University)
• Mattea Welch (PerkLab, Queen's University)
• Matthew Holden (Queen's University)
• Matthew McCormick (Kitware, Inc)
• Matthew S. Holden (Queen's University)
• Matthew Woehlke (Kitware)
• Maxime Desplanques (CNAO, Italy)
• Mehran Pesteie (UBC)
• Michael Jeulin-Lagarrigue (Kitware)
• Mikael Brudfors (UCL)
• N
• n
• Nabgha Fahrat
• Natalia Martinez
• Neuro Image Resarch
• Nicholas Herlambang (AZE R&D)
• Nick Tustison (UPenn)
• Nicole Aucoin (BWH)
• Nikos Chrisochoides (CRTC)
• o
• Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
• P
• Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
• Pat Marion (Kitware)
• Patricio Vela (Georgia Institute of Technology)
• Pengdong Xiao (Department of Orthodontics, UNC)
• Peter Behringer (SPL)
• Peter Black (BWH)
• Peter Karasev (Georgia Tech)
• Peter Savadjiev
• Pierre Seroul (UNC)
• Pietro Nardelli (University College Cork)
• Please direct questions or suggestions to http://groups.google.com/group/plastimatch
• Polina Goll
• Q
• Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• r
• Raul San Jose (SPL, LMI, BWH, SlicerDMRI)
• Reinhard Beichel (University of Iowa)
• Reinhard R. Beichel (Univ. of Iowa)
• Rob MacLeod (Utah)
• Robin Weiss (U. of Chicago)
• Roman Joldes (The University of Western Australia)
• Ron Kikinis (BWH)
• Ross Whitaker (Utah)
• Ruibin Ma
• Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• S
• s
• Salma Bengali (CARMA)
• Sam Song
• Sebastien Barré (Kitware)
• Sebastien Barre
• Shigeyuki Naka (SUMS)
• Soichiro Tani (BWH, SUMS)
• Sonia Pujol (BWH)
• Stefan Lienhard
• Stephen Aylward (Kitware)
• Stephen R Aylward (Kitware)
• Steve Pieper (Isomics Inc.)
• Steve Piepper (Isomics, Inc.)
• Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
• T
• t
• Tamas Ungi (Queen's Universit)
• Tammy DiPrima (Stony Brook University)
• the University of North Carolina at Chapel Hill (UNC)
• Thijs van der Hulst (Kapteyn Astronomical institute)
• Thomas Lawson (MRC Harwell, Oxfordshire)
• Thomas Vaughan (Queen's)
• Tina Kapur
• Tobias Penzkofer
• Tohru Tani (SUMS)
• u
• U
• UNC Medical School
• UofM School Of Dentistry
• UofM School of Dentistry
• v
• Vince Magnotta (UIowa) Joy Matsui (UIowa)
• Vincent A. Magnotta
• Vincent Magnotta
• Vinicius Boen (Univ of Michigan)
• Vivek Narayan (BWH)
• W
• Wendy Plesniak (SPL, BWH)
• Women's Hospital
• women's hospital
• Women's hospital
• Women's Hospital. University College of Cork (UCC))
• Xiao Da (MGH)
• Xiaodong Tao (GE)
• Xiaojun Chen
• y Wells
• Yangming Ou (MGH)
• Yanling Liu (SAIC-Frederick, NCI-Frederick)
• Yi Gao (Stony Brook University)
• Yinglin Lee (SPL, BWH)
• Yingxuan Zhu (GE)
• Yinpeng Li
• Yixun Liu (CRTC)
• Yogesh Rathi (yogesh@bwh.harvard.edu)
• Yong Zhang (IBM)
• Yumin Yuan
• Yundi Shi

'

• DicomRtImportExportPlugin

)

• DicomRtImportExportPlugin

A

• DicomRtImportExportPlugin

a

• DicomRtImportExportPlugin

Adam Rankin

• MarkupsToModel (loadable, bundled in SlicerIGT extension)
• Segmentations (loadable, built-in)

Akila Viswanathan

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Alan Morris

• CMRToolkitAutomaticLeftAtrialScar (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitAxialDilate (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitBooleanREMOVEFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitConnectedThresholdFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitInhomogeneityCorrection (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitIsolatedConnectedFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitPVAntrumCut (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistration (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistrationBRAINSFit (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitWizard (scripted, bundled in Cardiac_MRI_Toolkit extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• LASegmentationWorkflow (scripted, bundled in Cardiac_MRI_Toolkit extension)
• ScarVisualization (scripted, bundled in Cardiac_MRI_Toolkit extension)

Alec Robinson

• FilmDosimetryAnalysis (scripted, bundled in FilmDosimetryAnalysis extension)

Alex Yarmakovich

• Models (loadable, built-in)
• TractographyInteractiveSeeding (loadable, bundled in SlicerDMRI extension)

Alex Yarmarkovich

• AirwayInspector (loadable, bundled in Chest_Imaging_Platform extension)
• CIP_CalciumScoring (scripted, bundled in Chest_Imaging_Platform extension)
• Data (loadable, built-in)
• DiffusionTensorScalarMeasurements (cli, bundled in SlicerDMRI extension)
• DWIToDTIEstimation (cli, bundled in SlicerDMRI extension)
• FiberTractMeasurements (cli, bundled in SlicerDMRI extension)
• ImageLabelCombine (cli, built-in)
• Transforms (loadable, built-in)
• VolumeRendering (loadable, built-in)
• Volumes (loadable, built-in)

Alexis Girault

• Models (loadable, built-in)
• TwoCLIsInARowTest

Ali Ghayoor

• BRAINSFit (cli, built-in)
• BRAINSTransformConvert (cli, built-in)
• PerformMetricTest (cli, built-in)

Alireza Mehrtash

• DeepInfer (scripted, bundled in DeepInfer extension)
• iGyne (scripted, bundled in iGyne extension)
• mpReview (scripted, bundled in mpReview extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)

Allen Tannenbaum

• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)
• FastGrowCutEffect (scripted, bundled in FastGrowCutEffect extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• RobustStatisticsSegmenter (cli, built-in)
• ShortCutEffect (scripted, bundled in SlicerPathology extension)
• SobolevSegmenter (cli, bundled in SobolevSegmenter extension)

Alvaro Gomez

• dPetBrainQuantification (scripted, bundled in PetSpectAnalysis extension)

Amani Ibrahim

• TextureModel (scripted, bundled in SlicerIGT extension)

Amelie Meyer

• PlusRemote (scripted, bundled in SlicerIGT extension)

Analysis Laboratory

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)

Andras Lasso

• BreachWarning (loadable, bundled in SlicerIGT extension)
• BreachWarningSelfTest
• DICOMPatcher (scripted, built-in)
• DicomRtImportExport (loadable, bundled in SlicerRT extension)
• DistanceMapBasedRegistration (scripted, bundled in SlicerProstate extension)
• DoseAccumulation (loadable, bundled in SlicerRT extension)
• DoseComparison (loadable, bundled in SlicerRT extension)
• DoseVolumeHistogram (loadable, bundled in SlicerRT extension)
• ExtensionStats (scripted, bundled in DeveloperToolsForExtensions extension)
• Isodose (loadable, bundled in SlicerRT extension)
• LabelStatistics (scripted, built-in)
• MarkupsToModel (loadable, bundled in SlicerIGT extension)
• MarkupsWidgetsSelfTest
• MatlabCommander (cli, bundled in MatlabBridge extension)
• MatlabModuleGenerator (loadable, bundled in MatlabBridge extension)
• MetafileImporter (loadable, bundled in Sequences extension)
• ModelRegistration (scripted, bundled in SlicerIGT extension)
• NodeInfo (scripted, bundled in DebuggingTools extension)
• NodeModifiedStatistics (scripted, bundled in DebuggingTools extension)
• Philips4dUsDicomPatcher (scripted, bundled in SlicerHeart extension)
• PlusModelCatalogBrowser (scripted, bundled in SlicerIGT extension)
• PlusRemote (scripted, bundled in SlicerIGT extension)
• PyDevRemoteDebug (scripted, bundled in DebuggingTools extension)
• QuantitativeReporting (scripted, bundled in QuantitativeReporting extension)
• ScreenCapture (scripted, built-in)
• Segmentations (loadable, built-in)
• SegmentComparison (loadable, bundled in SlicerRT extension)
• SegmentEditor (scripted, built-in)
• SegmentEditorFastMarching (scripted, bundled in SegmentEditorExtraEffects extension)
• SegmentEditorFloodFilling (scripted, bundled in SegmentEditorExtraEffects extension)
• SegmentEditorWatershed (scripted, bundled in SegmentEditorExtraEffects extension)
• SegmentMorphology (loadable, bundled in SlicerRT extension)
• SegmentStatistics (scripted, built-in)
• SequenceBrowser (loadable, bundled in Sequences extension)
• Sequences (loadable, bundled in Sequences extension)
• Tables (loadable, built-in)
• TablesSelfTest
• TextureModel (scripted, bundled in SlicerIGT extension)
• TrackerStabilizer (loadable, bundled in TrackerStabilizer extension)
• Transforms (loadable, built-in)
• ValveView (scripted, bundled in SlicerHeart extension)
• Viewpoint (scripted, bundled in SlicerIGT extension)
• VolumeClipWithModel (scripted, bundled in VolumeClip extension)
• VolumeClipWithRoi (scripted, bundled in VolumeClip extension)
• Watchdog (loadable, bundled in SlicerIGT extension)
• WatchdogSelfTest

Andre Mastmeyer

• NeedleFinder (scripted, bundled in NeedleFinder extension)

Andreas Freudling

• VolumeRendering (loadable, built-in)

Andrey Fedorov

• BodyCentricCubicMesh (cli, bundled in CBC_3D_I2MConversion extension)
• BSplineToDeformationField (cli, built-in)
• ChangeTracker (scripted, bundled in ChangeTracker extension)
• ChangeTrackerSelfTest
• CropVolume (loadable, built-in)
• CropVolumeSelfTest
• DICOMParametricMapPlugin
• DICOMRWVMPlugin
• DICOMSegmentationPlugin
• DICOMTID1500Plugin
• DistanceMapBasedRegistration (scripted, bundled in SlicerProstate extension)
• DumpSEGFrame (cli)
• EncodeSEG (cli)
• IntensityDifferenceMetric (cli, bundled in ChangeTracker extension)
• itkimage2paramap (cli, bundled in DCMQI extension)
• itkimage2segimage (cli, bundled in DCMQI extension)
• mpReview (scripted, bundled in mpReview extension)
• mpReviewPreprocessor (scripted, bundled in mpReview extension)
• MultiVolumeExplorer (loadable, built-in)
• MultiVolumeImporter (scripted, built-in)
• MultiVolumeImporterPlugin
• N4ITKBiasFieldCorrection (cli, built-in)
• OpenCV (loadable, bundled in SlicerOpenCV extension)
• paramap2itkimage (cli, bundled in DCMQI extension)
• PBNRR (cli, bundled in PBNRR extension)
• PkModeling (cli, bundled in PkModeling extension)
• QuadEdgeSurfaceMesher (cli, bundled in SlicerProstate extension)
• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• QuantitativeReporting (scripted, bundled in QuantitativeReporting extension)
• SEG2NRRD (cli)
• segimage2itkimage (cli, bundled in DCMQI extension)
• SegmentationSmoothing (cli, bundled in SlicerProstate extension)
• SlicerProstate (scripted, bundled in SlicerProstate extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)
• tid1500reader (cli, bundled in DCMQI extension)
• tid1500writer (cli, bundled in DCMQI extension)
• WindowLevelEffect (scripted, bundled in WindowLevelEffect extension)

Andriy Fedorov

• DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
• DWModeling (cli, bundled in SlicerProstate extension)
• SliceTracker (scripted, bundled in SliceTracker extension)
• SliceTrackerRegistration (scripted, bundled in SliceTracker extension)
• SliceTrackerZFrameRegistration (scripted, bundled in SliceTracker extension)
• T1Mapping (cli, bundled in T1Mapping extension)
• ZFrameCalibration (cli, bundled in SliceTracker extension)

Andriy Kot

• PBNRR (cli, bundled in PBNRR extension)

Aniqah Mair

• MarkupsToModel (loadable, bundled in SlicerIGT extension)

Anonymous

• CLIROITest (cli, built-in)
• EMSegmentTransformToNewFormat (cli, built-in)

Antonio Carlos da S. Senra Filho

• ROBEXBrainExtraction (cli, bundled in ROBEXBrainExtraction extension)

Antonio Damato

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Applied Chest Imaging Laboratory

• CIP_ (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_BodyComposition (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_CalciumScoring (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_Common (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_LesionModel (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_MIPViewer (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PAARatio (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_ParenchymaAnalysis (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_ParenchymaSubtypeTraining (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PointsLabelling (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_TracheaStentPlanning (scripted, bundled in Chest_Imaging_Platform extension)
• ClassifyFissureParticles (cli, bundled in Chest_Imaging_Platform extension)
• ComputeCrossSectionalArea (cli, bundled in Chest_Imaging_Platform extension)
• ComputeDistanceMap (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFeatureStrength (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFissureFeatureVectors (cli, bundled in Chest_Imaging_Platform extension)
• ComputeIntensityStatistics (cli, bundled in Chest_Imaging_Platform extension)
• ConvertChestRegionChestTypeToLabelMapValue (cli, bundled in Chest_Imaging_Platform extension)
• ConvertDicom (cli, bundled in Chest_Imaging_Platform extension)
• ConvertLabelMapValueToChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• CropLung (cli, bundled in Chest_Imaging_Platform extension)
• EnhanceFissuresInImage (cli, bundled in Chest_Imaging_Platform extension)
• EvaluateLungLobeSegmentationResults (cli, bundled in Chest_Imaging_Platform extension)
• ExecuteSystemCommand (cli, bundled in Chest_Imaging_Platform extension)
• ExtractChestLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• ExtractFissureBoundaryFromLobeMap (cli, bundled in Chest_Imaging_Platform extension)
• ExtractParticlesFromChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• FilterAirwayParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterConnectedComponents (cli, bundled in Chest_Imaging_Platform extension)
• FilterFissureParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterVesselParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FindPatchMatch (cli, bundled in Chest_Imaging_Platform extension)
• FitLobeSurfaceModelsToParticleData (cli, bundled in Chest_Imaging_Platform extension)
• GenerateAtlasConvexHull (cli, bundled in Chest_Imaging_Platform extension)
• GenerateBinaryThinning3D (cli, bundled in Chest_Imaging_Platform extension)
• GenerateDistanceMapFromLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateImageSubVolumes (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLesionSegmentation (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLobeSurfaceModels (cli, bundled in Chest_Imaging_Platform extension)
• GenerateMedianFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateModel (cli, bundled in Chest_Imaging_Platform extension)
• GenerateNLMFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOtsuLungCast (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOverlayImages (cli, bundled in Chest_Imaging_Platform extension)
• GenerateParenchymaPhenotypes (cli, bundled in Chest_Imaging_Platform extension)
• GeneratePartialLungLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateSimpleLungMask (cli, bundled in Chest_Imaging_Platform extension)
• GenerateStenciledLabelMapFromParticles (cli, bundled in Chest_Imaging_Platform extension)
• GetStructuresInLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa2D (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationSimilarityMetric (cli, bundled in Chest_Imaging_Platform extension)
• GraphCutsOptimization (cli, bundled in Chest_Imaging_Platform extension)
• LabelMapFromRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• LabelParticlesByChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• MaskOutLabelMapStructures (cli, bundled in Chest_Imaging_Platform extension)
• MergeChestLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• MergeParticleDataSets (cli, bundled in Chest_Imaging_Platform extension)
• PerformMorphological (cli, bundled in Chest_Imaging_Platform extension)
• PerturbParticles (cli, bundled in Chest_Imaging_Platform extension)
• QualityControl (cli, bundled in Chest_Imaging_Platform extension)
• ReadDicomWriteTags (cli, bundled in Chest_Imaging_Platform extension)
• ReadNRRDsWriteVTK (cli, bundled in Chest_Imaging_Platform extension)
• ReadVidaWriteCIP (cli, bundled in Chest_Imaging_Platform extension)
• ReadVTKWriteNRRDs (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteImageData (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• RegionTypeLocationsToROIVolume (cli, bundled in Chest_Imaging_Platform extension)
• RegisterCT (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLungAtlas (cli, bundled in Chest_Imaging_Platform extension)
• RemapLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• RemoveChestTypeFromLabelMapUsingParticles (cli, bundled in Chest_Imaging_Platform extension)
• RemoveParticlesFromParticlesDataSet (cli, bundled in Chest_Imaging_Platform extension)
• ResampleCT (cli, bundled in Chest_Imaging_Platform extension)
• ResampleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• RescaleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• SegmentLungAirways (cli, bundled in Chest_Imaging_Platform extension)
• SegmentLungLobes (cli, bundled in Chest_Imaging_Platform extension)
• SplitLeftLungRightLung (cli, bundled in Chest_Imaging_Platform extension)
• TransferRegionAndTypeIndicesToFromPoints (cli, bundled in Chest_Imaging_Platform extension)

Arie Nakhmani

• SobolevSegmenter (cli, bundled in SobolevSegmenter extension)

Atsushi Yamada

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)
• PathExplorer (loadable, bundled in SlicerIGT extension)
• SlicerToKiwiExporter (scripted, bundled in SlicerToKiwiExporter extension)

b

• DicomRtImportExportPlugin

Beatriz Paniagua from Department of Orthodontics

• IntensitySegmenter (cli, bundled in IntensitySegmenter extension)

Benjamin Long

• SampleData (scripted, built-in)

Bill Lorensen

• AddScalarVolumes (cli, built-in)
• CheckerBoardFilter (cli, built-in)
• CreateDICOMSeries (cli, built-in)
• CurvatureAnisotropicDiffusion (cli, built-in)
• DiffusionTensorTest (cli, built-in)
• ExecutionModelTour (cli, built-in)
• GradientAnisotropicDiffusion (cli, built-in)
• GrayscaleFillHoleImageFilter (cli, built-in)
• GrayscaleGrindPeakImageFilter (cli, built-in)
• GrayscaleModelMaker (cli, built-in)
• HistogramMatching (cli, built-in)
• MedianImageFilter (cli, built-in)
• ModelMaker (cli, built-in)
• MultiplyScalarVolumes (cli, built-in)
• OrientScalarVolume (cli, built-in)
• OtsuThresholdImageFilter (cli, built-in)
• ResampleScalarVolume (cli, built-in)
• SpacingAwareCurvatureDiffusion (cli, bundled in IASEM extension)
• SubtractScalarVolumes (cli, built-in)
• SwissSkullStripper (cli, bundled in SwissSkullStripper extension)
• VotingBinaryHoleFillingImageFilter (cli, built-in)

Brad Davis

• EMSegmentCommandLine (cli, built-in)

Bradley Lowekamp

• BinaryWatershedEffect (scripted, bundled in IASEM extension)
• BinShrink (cli, bundled in IASEM extension)
• DoubleThresholdEffect (scripted, bundled in IASEM extension)
• IASEMImport (cli, bundled in IASEM extension)
• IASEMImportSeries (cli, bundled in IASEM extension)
• LabelObjectStatistics (scripted, bundled in IASEM extension)
• SimpleFilters (scripted, built-in)
• SpacingAwareCurvatureDiffusion (cli, bundled in IASEM extension)

Brian Zenger

• CMRToolkitWizard (scripted, bundled in Cardiac_MRI_Toolkit extension)

Brigham

• CIP_ (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_BodyComposition (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_CalciumScoring (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_Common (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_LesionModel (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_MIPViewer (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PAARatio (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_ParenchymaSubtypeTraining (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PointsLabelling (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_TracheaStentPlanning (scripted, bundled in Chest_Imaging_Platform extension)
• ClassifyFissureParticles (cli, bundled in Chest_Imaging_Platform extension)
• ComputeCrossSectionalArea (cli, bundled in Chest_Imaging_Platform extension)
• ComputeDistanceMap (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFeatureStrength (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFissureFeatureVectors (cli, bundled in Chest_Imaging_Platform extension)
• ComputeIntensityStatistics (cli, bundled in Chest_Imaging_Platform extension)
• ConvertChestRegionChestTypeToLabelMapValue (cli, bundled in Chest_Imaging_Platform extension)
• ConvertDicom (cli, bundled in Chest_Imaging_Platform extension)
• ConvertLabelMapValueToChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• CropLung (cli, bundled in Chest_Imaging_Platform extension)
• EnhanceFissuresInImage (cli, bundled in Chest_Imaging_Platform extension)
• EvaluateLungLobeSegmentationResults (cli, bundled in Chest_Imaging_Platform extension)
• ExecuteSystemCommand (cli, bundled in Chest_Imaging_Platform extension)
• ExtractChestLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• ExtractFissureBoundaryFromLobeMap (cli, bundled in Chest_Imaging_Platform extension)
• ExtractParticlesFromChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• FilterAirwayParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterConnectedComponents (cli, bundled in Chest_Imaging_Platform extension)
• FilterFissureParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterVesselParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FindPatchMatch (cli, bundled in Chest_Imaging_Platform extension)
• FitLobeSurfaceModelsToParticleData (cli, bundled in Chest_Imaging_Platform extension)
• GenerateAtlasConvexHull (cli, bundled in Chest_Imaging_Platform extension)
• GenerateBinaryThinning3D (cli, bundled in Chest_Imaging_Platform extension)
• GenerateDistanceMapFromLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateImageSubVolumes (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLesionSegmentation (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLobeSurfaceModels (cli, bundled in Chest_Imaging_Platform extension)
• GenerateMedianFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateModel (cli, bundled in Chest_Imaging_Platform extension)
• GenerateNLMFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOtsuLungCast (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOverlayImages (cli, bundled in Chest_Imaging_Platform extension)
• GenerateParenchymaPhenotypes (cli, bundled in Chest_Imaging_Platform extension)
• GeneratePartialLungLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateSimpleLungMask (cli, bundled in Chest_Imaging_Platform extension)
• GenerateStenciledLabelMapFromParticles (cli, bundled in Chest_Imaging_Platform extension)
• GetStructuresInLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa2D (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationSimilarityMetric (cli, bundled in Chest_Imaging_Platform extension)
• GraphCutsOptimization (cli, bundled in Chest_Imaging_Platform extension)
• LabelMapFromRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• LabelParticlesByChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• MaskOutLabelMapStructures (cli, bundled in Chest_Imaging_Platform extension)
• MergeChestLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• MergeParticleDataSets (cli, bundled in Chest_Imaging_Platform extension)
• PerformMorphological (cli, bundled in Chest_Imaging_Platform extension)
• PerturbParticles (cli, bundled in Chest_Imaging_Platform extension)
• QualityControl (cli, bundled in Chest_Imaging_Platform extension)
• ReadDicomWriteTags (cli, bundled in Chest_Imaging_Platform extension)
• ReadNRRDsWriteVTK (cli, bundled in Chest_Imaging_Platform extension)
• ReadVidaWriteCIP (cli, bundled in Chest_Imaging_Platform extension)
• ReadVTKWriteNRRDs (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteImageData (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• RegionTypeLocationsToROIVolume (cli, bundled in Chest_Imaging_Platform extension)
• RegisterCT (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLungAtlas (cli, bundled in Chest_Imaging_Platform extension)
• RemapLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• RemoveChestTypeFromLabelMapUsingParticles (cli, bundled in Chest_Imaging_Platform extension)
• RemoveParticlesFromParticlesDataSet (cli, bundled in Chest_Imaging_Platform extension)
• ResampleCT (cli, bundled in Chest_Imaging_Platform extension)
• ResampleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• RescaleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• SegmentLungAirways (cli, bundled in Chest_Imaging_Platform extension)
• SegmentLungLobes (cli, bundled in Chest_Imaging_Platform extension)
• SplitLeftLungRightLung (cli, bundled in Chest_Imaging_Platform extension)
• TransferRegionAndTypeIndicesToFromPoints (cli, bundled in Chest_Imaging_Platform extension)

BWH

• DICOMParametricMapPlugin
• DICOMSegmentationPlugin
• DumpSEGFrame (cli)
• EncodeSEG (cli)
• MultiVolumeImporterPlugin
• SEG2NRRD (cli)

C

• DicomRtImportExportPlugin

Carl-Fredrik Westin

• UKFTractography (cli, bundled in UKFTractography extension)

Casey B Goodlett

• ExpertAutomatedRegistration (cli, built-in)
• FiducialRegistration (cli, built-in)

Charles Marion

• DataStore (loadable, built-in)

Christian Bauer

• PETIndiC (scripted, bundled in PET-IndiC extension)
• PETLiverUptakeMeasurement (cli, bundled in PETLiverUptakeMeasurement extension)
• PETTumorSegmentation (loadable, bundled in PETTumorSegmentation extension)
• PETTumorSegmentationEffect (scripted, bundled in PETTumorSegmentation extension)
• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• SegmentEditorPETTumor (scripted, bundled in PETTumorSegmentation extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)

Christian Baumgartner

• ConvertVTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Christian Herz

• DICOMTID1500Plugin
• itkimage2paramap (cli, bundled in DCMQI extension)
• itkimage2segimage (cli, bundled in DCMQI extension)
• mpReview (scripted, bundled in mpReview extension)
• mpReviewPreprocessor (scripted, bundled in mpReview extension)
• paramap2itkimage (cli, bundled in DCMQI extension)
• QuantitativeReporting (scripted, bundled in QuantitativeReporting extension)
• segimage2itkimage (cli, bundled in DCMQI extension)
• SlicerProstate (scripted, bundled in SlicerProstate extension)
• SliceTracker (scripted, bundled in SliceTracker extension)
• SliceTrackerRegistration (scripted, bundled in SliceTracker extension)
• SliceTrackerZFrameRegistration (scripted, bundled in SliceTracker extension)
• tid1500reader (cli, bundled in DCMQI extension)
• tid1500writer (cli, bundled in DCMQI extension)
• VolumeClipToLabel (scripted, bundled in SliceTracker extension)
• ZFrameCalibration (cli, bundled in SliceTracker extension)

Clement Mirabel

• DatabaseInteractor (scripted, bundled in DatabaseInteractor extension)

Csaba Pinter

• BatchStructureSetConversion (scripted, bundled in SlicerRT extension)
• Beams (loadable, bundled in SlicerRT extension)
• Data (loadable, built-in)
• DicomRtImportExport (loadable, bundled in SlicerRT extension)
• DICOMScalarVolumePlugin
• DoseAccumulation (loadable, bundled in SlicerRT extension)
• DoseComparison (loadable, bundled in SlicerRT extension)
• DoseVolumeHistogram (loadable, bundled in SlicerRT extension)
• DvhComparison (scripted, bundled in SlicerRT extension)
• ExternalBeamPlanning (loadable, bundled in SlicerRT extension)
• FilmDosimetryAnalysis (scripted, bundled in FilmDosimetryAnalysis extension)
• GelDosimetryAnalysis (scripted, bundled in GelDosimetryAnalysis extension)
• GelDosimetryAnalysisAlgo (loadable, bundled in GelDosimetryAnalysis extension)
• IGRTWorkflow_SelfTest
• Isodose (loadable, bundled in SlicerRT extension)
• PlanarImage (loadable, bundled in SlicerRT extension)
• QuantitativeReporting (scripted, bundled in QuantitativeReporting extension)
• Segmentations (loadable, built-in)
• SegmentComparison (loadable, bundled in SlicerRT extension)
• SegmentEditor (scripted, built-in)
• SegmentMorphology (loadable, bundled in SlicerRT extension)
• SubjectHierarchy (loadable, built-in)
• SubjectHierarchyCorePluginsSelfTest
• SubjectHierarchyGenericSelfTest
• Terminologies (loadable, built-in)
• VffFileReader (loadable, bundled in SlicerRT extension)

d

• DicomRtImportExportPlugin

Dan Marcus

• XnatSlicer (scripted, bundled in XNATSlicer extension)

Danfeng Chen

• GraphCutSegmentSelfTest

Daniel Blezek

• ExecutionModelTour (cli, built-in)

Daniel Haehn

• Annotations (loadable, built-in)
• CenterlineComputation (scripted, bundled in VMTK extension)
• EMSegment (loadable, built-in)
• EMSegmentCommandLine (cli, built-in)
• LevelSetSegmentation (scripted, bundled in VMTK extension)
• MergeModels (cli, built-in)
• SceneViews (loadable, built-in)
• VesselnessFiltering (scripted, bundled in VMTK extension)

Danny Perry

• CMRToolkitInhomogeneityCorrection (cli, bundled in Cardiac_MRI_Toolkit extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)

Davide Punzo

• AstroModeling (loadable, bundled in SlicerAstro extension)
• AstroSampleData (scripted, bundled in SlicerAstro extension)
• AstroSmoothing (loadable, bundled in SlicerAstro extension)
• AstroVolume (loadable, bundled in SlicerAstro extension)
• AstroWelcome (loadable, bundled in SlicerAstro extension)
• SlicerAstroDataProbe (scripted, bundled in SlicerAstro extension)
• SlicerOrientationSelectorTest

Demian Wassermann

• DICOM2FullBrainTractography (scripted, bundled in SlicerDMRI extension)
• DiffusionTensorScalarMeasurements (cli, bundled in SlicerDMRI extension)
• DiffusionWeightedVolumeMasking (cli, bundled in SlicerDMRI extension)
• DWIToDTIEstimation (cli, bundled in SlicerDMRI extension)
• FiberBundleLabelSelect (cli, bundled in SlicerDMRI extension)
• test_tractography_display
• TractographyLabelMapSeeding (cli, bundled in SlicerDMRI extension)

Dirk Padfield

• LabelMapSmoothing (cli, built-in)

Dominik Meier

• FiducialRegistration (cli, built-in)

e

• DicomRtImportExportPlugin

er

• FilmDosimetryAnalysis (scripted, bundled in FilmDosimetryAnalysis extension)
• GelDosimetryAnalysis (scripted, bundled in GelDosimetryAnalysis extension)

Erich Bremer

• ShortCutEffect (scripted, bundled in SlicerPathology extension)
• SlicerPathology (scripted, bundled in SlicerPathology extension)

Ethan Ulrich

• DICOMPETSUVPlugin
• DICOMRWVMPlugin
• PETIndiC (scripted, bundled in PET-IndiC extension)
• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)

Eugene Kholmovski

• CMRToolkitInhomogeneityCorrection (cli, bundled in Cardiac_MRI_Toolkit extension)

Fan Zhang

• FiberBundleLabelSelect (cli, bundled in SlicerDMRI extension)
• FiberTractMeasurements (cli, bundled in SlicerDMRI extension)

Fotis Drakopoulos

• BodyCentricCubicMesh (cli, bundled in CBC_3D_I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

Francois Budin

• AnglePlanes (scripted, bundled in ShapeQuantifier extension)
• DeveloperToolsForExtensions (scripted, bundled in DeveloperToolsForExtensions extension)
• IntensitySegmenter (cli, bundled in IntensitySegmenter extension)
• MeshToLabelMap (cli, bundled in MeshToLabelMap extension)
• ModelToModelDistance (cli, bundled in ModelToModelDistance extension)
• ResampleDTIlogEuclidean (cli, bundled in ResampleDTIlogEuclidean extension)
• ResampleDTIVolume (cli, built-in)
• ResampleScalarVectorDWIVolume (cli, built-in)

Franklin King

• CollectFiducials (loadable, bundled in SlicerIGT extension)
• PivotCalibration (loadable, bundled in SlicerIGT extension)
• PlusRemote (scripted, bundled in SlicerIGT extension)
• ScoliosisMonitoring (scripted, bundled in Scoliosis extension)
• SpinalCurvatureMeasurement (scripted, bundled in Scoliosis extension)
• TransformFusion (loadable, bundled in SlicerIGT extension)
• Transforms (loadable, built-in)

g

• DicomRtImportExportPlugin

Gabor Fichtinger

• Viewpoint (scripted, bundled in SlicerIGT extension)

Gopalkrishna Veni

• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)

Gr

• ScatteredTransform (cli, bundled in ScatteredTransform extension)

Greg Gardner

• CMRToolkitPVAntrumCut (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistration (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistrationBRAINSFit (scripted, bundled in Cardiac_MRI_Toolkit extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)

Greg Harris

• BRAINSDemonWarp (cli, built-in)
• BRAINSResample (cli, built-in)
• VBRAINSDemonWarp (cli, built-in)

Greg Sharp

• ExternalBeamPlanning (loadable, bundled in SlicerRT extension)

Gregory Sharp

• DicomSroExport (scripted, bundled in SlicerRT extension)
• PlmRegister (scripted, bundled in SlicerRT extension)

Guido Gerig

• ExtractSkeleton (cli, built-in)

Guillaume Pernelle

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Guillermo Carbajal

• dPetBrainQuantification (scripted, bundled in PetSpectAnalysis extension)

H

• DicomRtImportExportPlugin

Hans J. Johnson

• BRAINSDemonWarp (cli, built-in)
• BRAINSFit (cli, built-in)
• BRAINSROIAuto (cli, built-in)
• BRAINSTransformConvert (cli, built-in)
• VBRAINSDemonWarp (cli, built-in)

Hans Johnson

• BRAINSResample (cli, built-in)
• BRAINSResize (cli, built-in)
• CardiacAgatstonMeasures (scripted, bundled in CardiacAgatstonMeasures extension)
• DWIConvert (cli, built-in)
• PETSUVImageMaker (cli, bundled in LongitudinalPETCT extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)
• UKFTractography (cli, bundled in UKFTractography extension)

hans-johnson -at- uiowa.edu

• BRAINSROIAuto (cli, built-in)

http://www.psychiatry.uiowa.edu

• BRAINSROIAuto (cli, built-in)

i

• DicomRtImportExportPlugin

Ipek Oguz

• ConvertVTK (cli, bundled in UKFTractography extension)
• MeshToLabelMap (cli, bundled in MeshToLabelMap extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Isaiah Norton

• DICOMTract_to_VTK (cli, bundled in SlicerDMRI extension)
• DiffusionTensorScalarMeasurements (cli, bundled in SlicerDMRI extension)
• DiffusionWeightedVolumeMasking (cli, bundled in SlicerDMRI extension)
• DMRIInstall (scripted, built-in)
• DWIToDTIEstimation (cli, bundled in SlicerDMRI extension)
• VTK_to_DICOMTract (cli, bundled in SlicerDMRI extension)

Isomics Inc

• DicomUltrasoundPlugin

Ivan Kolesov

• CarreraSlice (loadable, bundled in CarreraSlice extension)
• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)
• FastGrowCutEffect (scripted, bundled in FastGrowCutEffect extension)

Jaime Garcia Guevara

• BreachWarning (loadable, bundled in SlicerIGT extension)
• MarkupsToModel (loadable, bundled in SlicerIGT extension)

Jaime Garcia-Guevara

• BreachWarningSelfTest
• Watchdog (loadable, bundled in SlicerIGT extension)
• WatchdogSelfTest

Jan Egger

• iGyne (scripted, bundled in iGyne extension)

Jayashree Kalpathy-Cramer

• DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
• T1Mapping (cli, bundled in T1Mapping extension)

Jayender Jagadeesan

• HeterogeneityCAD (scripted, bundled in OpenCAD extension)
• SegmentCAD (scripted, bundled in OpenCAD extension)
• TrackerStabilizer (loadable, bundled in TrackerStabilizer extension)

Jean-Baptiste Berger

• DataStore (loadable, built-in)

Jean-Baptiste VIMORT

• Q3DC (scripted, bundled in Q3DC extension)
• SurfaceRegistration (scripted, bundled in CMFreg extension)

Jean-Baptiste Vimort

• AnglePlanes (scripted, bundled in ShapeQuantifier extension)
• EasyClip (scripted, bundled in EasyClip extension)
• PickAndPaint (scripted, bundled in PickAndPaintExtension extension)
• ShapeQuantifier (scripted, bundled in ShapeQuantifier extension)

Jean-Christophe Fillion-Robin

• AstroSmoothing (loadable, bundled in SlicerAstro extension)
• AstroVolume (loadable, bundled in SlicerAstro extension)
• AstroWelcome (loadable, bundled in SlicerAstro extension)
• BRAINSFitRigidRegistrationCrashIssue4139
• CLI4Test
• DataStore (loadable, built-in)
• DTINotReproducibleIssue3977
• ExtensionStats (scripted, bundled in DeveloperToolsForExtensions extension)
• FastGrowCut (loadable, bundled in FastGrowCutEffect extension)
• FastGrowCutSegmenter (loadable, bundled in CarreraSlice extension)
• fiber_visibility_crash2438
• MatlabCommander (cli, bundled in MatlabBridge extension)
• MatlabModuleGenerator (loadable, bundled in MatlabBridge extension)
• MultiVolumeExplorer (loadable, built-in)
• MultiVolumeImporter (scripted, built-in)
• OpenCV (loadable, bundled in SlicerOpenCV extension)
• QuickTCGA (loadable, bundled in SlicerPathology extension)
• SampleData (scripted, built-in)
• ShortCutCore (loadable, bundled in SlicerPathology extension)
• SimpleFilters (scripted, built-in)
• SlicerOrientationSelectorTest
• SlicerToKiwiExporter (scripted, bundled in SlicerToKiwiExporter extension)
• Transforms (loadable, built-in)
• ViewControllers (loadable, built-in)
• Welcome (loadable, built-in)

Jennifer Andrea

• GelDosimetryAnalysis (scripted, bundled in GelDosimetryAnalysis extension)
• VffFileReader (loadable, bundled in SlicerRT extension)

Jessica Forbes

• CardiacAgatstonMeasures (scripted, bundled in CardiacAgatstonMeasures extension)

Jessica Lee

• UKFTractography (cli, bundled in UKFTractography extension)

Jim Miller

• Charting (scripted, built-in)
• PkModeling (cli, bundled in PkModeling extension)
• SimpleRegionGrowingSegmentation (cli, built-in)
• SliceLinkLogic (scripted, built-in)
• Slicer4Minute (scripted, built-in)
• ViewControllers (loadable, built-in)
• ViewControllersSliceInterpolationBug1926

Joel Saltz

• ShortCutEffect (scripted, bundled in SlicerPathology extension)
• SlicerPathology (scripted, bundled in SlicerPathology extension)

Johan Andruejol

• CLIEventTest
• SlicerBoundsTest
• SlicerTransformInteractionTest1
• TwoCLIsInARowTest
• TwoCLIsInParallelTest
• Units (loadable, built-in)
• UtilTest

John Buatti

• PETIndiC (scripted, bundled in PET-IndiC extension)
• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)

John Doe

• GraphCutInteractiveSegmenter (loadable, bundled in GraphCutSegment extension)
• SlicerPathology (scripted, bundled in SlicerPathology extension)

John Evans

• PkModeling (cli, bundled in PkModeling extension)

Jonathan Bronson

• CleaverCLI (cli, bundled in CleaverExtension extension)

Jorge Onieva

• CIP_ (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_BodyComposition (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_Common (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_LesionModel (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_MIPViewer (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PAARatio (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_ParenchymaSubtypeTraining (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PointsLabelling (scripted, bundled in Chest_Imaging_Platform extension)

Jos Roerdink

• AstroModeling (loadable, bundled in SlicerAstro extension)
• AstroSmoothing (loadable, bundled in SlicerAstro extension)
• AstroVolume (loadable, bundled in SlicerAstro extension)
• AstroWelcome (loadable, bundled in SlicerAstro extension)

Josh Cates

• CMRToolkitAutomaticLeftAtrialScar (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitAxialDilate (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitBooleanREMOVEFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitConnectedThresholdFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitInhomogeneityCorrection (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitIsolatedConnectedFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitPVAntrumCut (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistration (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistrationBRAINSFit (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitWizard (scripted, bundled in Cardiac_MRI_Toolkit extension)
• LabelMapSmoothing (cli, built-in)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• LASegmentationWorkflow (scripted, bundled in Cardiac_MRI_Toolkit extension)
• ScarVisualization (scripted, bundled in Cardiac_MRI_Toolkit extension)

Juan Carlos Prieto

• AnglePlanes (scripted, bundled in ShapeQuantifier extension)
• DatabaseInteractor (scripted, bundled in DatabaseInteractor extension)

Julia Lopinto

• AnglePlanes (scripted, bundled in ShapeQuantifier extension)
• EasyClip (scripted, bundled in EasyClip extension)

Julien Finet

• Cameras (loadable, built-in)
• Colors (loadable, built-in)
• Data (loadable, built-in)
• DoubleArrays (loadable, built-in)
• EventBroker
• ImageMaker (cli, bundled in ImageMaker extension)
• Models (loadable, built-in)
• MultiVolumeExplorer (loadable, built-in)
• MultiVolumeImporter (scripted, built-in)
• ScenePerformance (scripted, built-in)
• ThresholdScalarVolume (cli, built-in)
• TractographyDisplay (loadable, bundled in SlicerDMRI extension)
• Transforms (loadable, built-in)
• Units (loadable, built-in)
• VolumeRendering (loadable, built-in)
• Volumes (loadable, built-in)

Julien Jomier

• GaussianBlurImageFilter (cli, built-in)

Juliette Pera

• ModelToModelDistance (cli, bundled in ModelToModelDistance extension)

Junichi Tokuda

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)
• CurveMaker (scripted, bundled in CurveMaker extension)
• PathExplorer (loadable, bundled in SlicerIGT extension)
• VolumeResliceDriver (loadable, bundled in SlicerIGT extension)

K

• DicomRtImportExportPlugin

Kent Williams

• BRAINSDWICleanup (cli, built-in)
• BRAINSTransformConvert (cli, built-in)
• ConvertVTK (cli, bundled in UKFTractography extension)
• DWIConvert (cli, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)

Kent WIlliams

• BRAINSStripRotation (cli, built-in)

Kevin Alex

• FilmDosimetryAnalysis (scripted, bundled in FilmDosimetryAnalysis extension)
• GelDosimetryAnalysis (scripted, bundled in GelDosimetryAnalysis extension)

Kevin Wang

• Beams (loadable, bundled in SlicerRT extension)
• ColorsScalarBarSelfTest
• DicomRtImportExport (loadable, bundled in SlicerRT extension)
• DicomSroExport (scripted, bundled in SlicerRT extension)
• DicomSroImport (loadable, bundled in SlicerRT extension)
• DicomSroImportPlugin
• DoseAccumulation (loadable, bundled in SlicerRT extension)
• DoseComparison (loadable, bundled in SlicerRT extension)
• DoseMorphology (loadable, bundled in MarginCalculator extension)
• DoseVolumeHistogram (loadable, bundled in SlicerRT extension)
• ExternalBeamPlanning (loadable, bundled in SlicerRT extension)
• Isodose (loadable, bundled in SlicerRT extension)
• MarginCalculator (scripted, bundled in MarginCalculator extension)
• MatlabCommander (cli, bundled in MatlabBridge extension)
• MatlabModuleGenerator (loadable, bundled in MatlabBridge extension)
• SegmentComparison (loadable, bundled in SlicerRT extension)
• SegmentMorphology (loadable, bundled in SlicerRT extension)
• SequenceBrowser (loadable, bundled in Sequences extension)
• Sequences (loadable, bundled in Sequences extension)
• SyntheticRTDose (scripted, bundled in MarginCalculator extension)
• Tables (loadable, built-in)

Kilian M Pohl

• IslandRemoval (cli, built-in)

Kilian Pohl

• Annotations (loadable, built-in)
• ChangeTracker (scripted, bundled in ChangeTracker extension)
• EMSegment (loadable, built-in)
• EMSegmentCommandLine (cli, built-in)
• SceneViews (loadable, built-in)

Koichiro Murakami

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)

Kyle Sunderl

• DvhComparison (scripted, bundled in SlicerRT extension)

L

• DicomRtImportExportPlugin

Lauren Barber

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Lauren J. O'Donnell

• DTINotReproducibleIssue3977

Lauren O'Donnell

• DiffusionTensorScalarMeasurements (cli, bundled in SlicerDMRI extension)
• DiffusionWeightedVolumeMasking (cli, bundled in SlicerDMRI extension)
• DWIToDTIEstimation (cli, bundled in SlicerDMRI extension)
• FiberBundleLabelSelect (cli, bundled in SlicerDMRI extension)
• FiberTractMeasurements (cli, bundled in SlicerDMRI extension)
• ProbeVolumeWithModel (cli, built-in)
• TractographyLabelMapSeeding (cli, bundled in SlicerDMRI extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Laurent Chauvin

• CurveMaker (scripted, bundled in CurveMaker extension)
• DiceComputation (loadable, bundled in DiceComputation extension)
• PathExplorer (loadable, bundled in SlicerIGT extension)
• TrackerStabilizer (loadable, bundled in TrackerStabilizer extension)

Liangjia Zhu

• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)
• FastGrowCutEffect (scripted, bundled in FastGrowCutEffect extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• ShortCutEffect (scripted, bundled in SlicerPathology extension)

Luca Antiga

• CenterlineComputation (scripted, bundled in VMTK extension)
• LevelSetSegmentation (scripted, bundled in VMTK extension)
• SurfaceToolbox (scripted, built-in)
• VesselnessFiltering (scripted, bundled in VMTK extension)

Lucie Macron

• MeshStatistics (scripted, bundled in MeshStatisticsExtension extension)
• PickAndPaint (scripted, bundled in PickAndPaintExtension extension)
• Q3DC (scripted, bundled in Q3DC extension)

Luping Fang

• GyroGuide (scripted, bundled in GyroGuide extension)

Marcel Prastawa marcel.prastawa@gmail.com

• ABC (cli, bundled in ABC extension)

Mark Scully

• DWIConvert (cli, built-in)

Markus Van Tol

• PETSUVImageMaker (cli, bundled in LongitudinalPETCT extension)

Markus van Tol

• PETIndiC (scripted, bundled in PET-IndiC extension)
• PETLiverUptakeMeasurement (cli, bundled in PETLiverUptakeMeasurement extension)
• PETTumorSegmentation (loadable, bundled in PETTumorSegmentation extension)
• PETTumorSegmentationEffect (scripted, bundled in PETTumorSegmentation extension)
• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• SegmentEditorPETTumor (scripted, bundled in PETTumorSegmentation extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)

Martin Bertran

• dPetBrainQuantification (scripted, bundled in PetSpectAnalysis extension)

Martin Styner

• ConvertVTK (cli, bundled in UKFTractography extension)
• ExtractSkeleton (cli, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)

Mason Winsauer

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)

Matt Lougheed

• ResectionVolume (scripted, bundled in ResectionPlanner extension)
• VolumeClipWithModel (scripted, bundled in VolumeClip extension)

Mattea Welch

• GelDosimetryAnalysis (scripted, bundled in GelDosimetryAnalysis extension)

Matthew Holden

• BreachWarning (loadable, bundled in SlicerIGT extension)
• FiducialRegistrationWizard (loadable, bundled in SlicerIGT extension)
• MetafileImporter (loadable, bundled in Sequences extension)
• PythonMetricsCalculator (scripted, bundled in PerkTutor extension)
• SequenceBrowser (loadable, bundled in Sequences extension)
• Sequences (loadable, bundled in Sequences extension)

Matthew McCormick

• ScanConvertCurvilinearArray (cli, bundled in SlicerITKUltrasound extension)
• ScanConvertPhasedArray3D (cli, bundled in SlicerITKUltrasound extension)
• ScanConvertSliceSeries (cli, bundled in SlicerITKUltrasound extension)

Matthew S. Holden

• PerkEvaluator (loadable, bundled in PerkTutor extension)
• TransformRecorder (loadable, bundled in PerkTutor extension)
• WorkflowSegmentation (loadable, bundled in PerkTutor extension)

Matthew Woehlke

• ExtensionWizard (scripted, built-in)

Maxime Desplanques

• ExternalBeamPlanning (loadable, bundled in SlicerRT extension)

Mehran Pesteie

• DeepInfer (scripted, bundled in DeepInfer extension)

Michael Jeulin-Lagarrigue

• Reformat (loadable, built-in)

Mikael Brudfors

• BreachWarning (loadable, bundled in SlicerIGT extension)
• NodeModifiedStatistics (scripted, bundled in DebuggingTools extension)

N

• DicomRtImportExportPlugin

n

• DicomRtImportExportPlugin

Nabgha Fahrat

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Natalia Martinez

• dPetBrainQuantification (scripted, bundled in PetSpectAnalysis extension)

Neuro Image Resarch

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)

Nicholas Herlambang

• JRC2013Vis

Nick Tustison

• N4ITKBiasFieldCorrection (cli, built-in)

Nicole Aucoin

• ACPCTransform (cli, built-in)
• AddManyMarkupsFiducialTest
• AddStorableDataAfterSceneViewTest
• Annotations (loadable, built-in)
• BlendVectorVolumes (cli, bundled in OpenCVExample extension)
• CastScalarVolume (cli, built-in)
• Colors (loadable, built-in)
• ColorsScalarBarSelfTest
• Data (loadable, built-in)
• FiducialLayoutSwitchBug1914
• GrayscaleModelMaker (cli, built-in)
• Markups (loadable, built-in)
• MarkupsInCompareViewersSelfTest
• MarkupsInViewsSelfTest
• MaskScalarVolume (cli, built-in)
• MergeModels (cli, built-in)
• ModelMaker (cli, built-in)
• Models (loadable, built-in)
• ModelToLabelMap (cli, built-in)
• NeurosurgicalPlanningTutorialMarkupsSelfTest
• NsgPlanTracto (scripted, bundled in SlicerDMRI extension)
• OpenCV (loadable, bundled in SlicerOpenCV extension)
• PETStandardUptakeValueComputation (cli, built-in)
• PETSUVImageMaker (cli, bundled in LongitudinalPETCT extension)
• SceneViews (loadable, built-in)
• SlicerMRBMultipleSaveRestoreLoopTest
• SlicerMRBMultipleSaveRestoreTest
• SlicerMRBSaveRestoreCheckPathsTest
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)
• ThresholdScalarVolume (cli, built-in)
• VolumeRenderingSceneClose (scripted, built-in)
• Volumes (loadable, built-in)

Nikos Chrisochoides

• BodyCentricCubicMesh (cli, bundled in CBC_3D_I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

o

• DicomRtImportExportPlugin

Olivier Clatz

• PBNRR (cli, bundled in PBNRR extension)

P

• DicomRtImportExportPlugin

Paolo Zaffino

• PlastimatchPy (loadable, bundled in SlicerRT extension)

Pat Marion

• SlicerToKiwiExporter (scripted, bundled in SlicerToKiwiExporter extension)

Patricio Vela

• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)

Pengdong Xiao

• IntensitySegmenter (cli, bundled in IntensitySegmenter extension)

Peter Behringer

• SliceTracker (scripted, bundled in SliceTracker extension)
• SliceTrackerRegistration (scripted, bundled in SliceTracker extension)
• VolumeClipToLabel (scripted, bundled in SliceTracker extension)

Peter Black

• ChangeTracker (scripted, bundled in ChangeTracker extension)

Peter Karasev

• CarreraSlice (loadable, bundled in CarreraSlice extension)
• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)

Peter Savadjiev

• UKFTractography (cli, bundled in UKFTractography extension)

Pierre Seroul

• ExtractSkeleton (cli, built-in)

Pietro Nardelli

• AirwaySegmentation (scripted, bundled in AirwaySegmentation extension)
• AirwaySegmentationCLI (cli, bundled in AirwaySegmentation extension)
• CIP_InteractiveLobeSegmentation (scripted, bundled in Chest_Imaging_Platform extension)
• ParticlesDisplay (loadable, bundled in Chest_Imaging_Platform extension)
• RegionType (loadable, bundled in Chest_Imaging_Platform extension)

Please direct questions or suggestions to http://groups.google.com/group/plastimatch

• plastimatch_slicer_bspline (cli, bundled in SlicerRT extension)
• plastimatch_slicer_landwarp (cli, bundled in SlicerRT extension)

Polina Goll

• EMSegmentCommandLine (cli, built-in)

Q

• DicomRtImportExportPlugin

Qing Pan

• GyroGuide (scripted, bundled in GyroGuide extension)

r

• DicomRtImportExportPlugin

Raul San Jose

• DiffusionTensorScalarMeasurements (cli, bundled in SlicerDMRI extension)
• DWIToDTIEstimation (cli, bundled in SlicerDMRI extension)
• TractographyLabelMapSeeding (cli, bundled in SlicerDMRI extension)

Reinhard Beichel

• QuantitativeIndicesCLI (cli, bundled in PET-IndiC extension)
• QuantitativeIndicesTool (scripted, bundled in PET-IndiC extension)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)

Reinhard R. Beichel

• PETIndiC (scripted, bundled in PET-IndiC extension)

Rob MacLeod

• CMRToolkitAutomaticLeftAtrialScar (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitAxialDilate (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitBooleanREMOVEFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitConnectedThresholdFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitInhomogeneityCorrection (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitIsolatedConnectedFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitPVAntrumCut (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistration (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistrationBRAINSFit (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitWizard (scripted, bundled in Cardiac_MRI_Toolkit extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• LASegmentationWorkflow (scripted, bundled in Cardiac_MRI_Toolkit extension)
• ScarVisualization (scripted, bundled in Cardiac_MRI_Toolkit extension)

Robin Weiss

• mpReview (scripted, bundled in mpReview extension)
• mpReviewPreprocessor (scripted, bundled in mpReview extension)

Roman Joldes

• ScatteredTransform (cli, bundled in ScatteredTransform extension)

Ron Kikinis

• ACPCTransform (cli, built-in)
• CastScalarVolume (cli, built-in)
• ChangeTracker (scripted, bundled in ChangeTracker extension)
• CropVolume (loadable, built-in)
• FastGrowCutEffect (scripted, bundled in FastGrowCutEffect extension)
• MaskScalarVolume (cli, built-in)
• MergeModels (cli, built-in)
• ModelMaker (cli, built-in)
• MultiVolumeExplorer (loadable, built-in)
• MultiVolumeImporter (scripted, built-in)
• N4ITKBiasFieldCorrection (cli, built-in)
• PETStandardUptakeValueComputation (cli, built-in)
• PETSUVImageMaker (cli, bundled in LongitudinalPETCT extension)
• RobustStatisticsSegmenter (cli, built-in)
• SurfaceToolbox (scripted, built-in)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)
• ThresholdScalarVolume (cli, built-in)
• ViewControllers (loadable, built-in)
• VolumeRendering (loadable, built-in)

Ross Whitaker

• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)
• LabelMapSmoothing (cli, built-in)

Ruibin Ma

• NeedleFinder (scripted, bundled in NeedleFinder extension)

Ruifeng Chen

• GyroGuide (scripted, bundled in GyroGuide extension)

S

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

s

• DicomRtImportExportPlugin

Salma Bengali

• CMRToolkitAxialDilate (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitBooleanREMOVEFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitConnectedThresholdFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitIsolatedConnectedFilter (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitLASegmentationGraphCuts (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitPVAntrumCut (cli, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistration (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitRegistrationBRAINSFit (scripted, bundled in Cardiac_MRI_Toolkit extension)
• CMRToolkitWizard (scripted, bundled in Cardiac_MRI_Toolkit extension)
• LASegmentationWorkflow (scripted, bundled in Cardiac_MRI_Toolkit extension)
• ScarVisualization (scripted, bundled in Cardiac_MRI_Toolkit extension)

Sam Song

• iGyne (scripted, bundled in iGyne extension)

Sebastien Barré

• Cameras (loadable, built-in)

Sebastien Barre

• EMSegmentCommandLine (cli, built-in)

Shigeyuki Naka

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)

Soichiro Tani

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)

Sonia Pujol

• DiceComputation (loadable, bundled in DiceComputation extension)

Stefan Lienhard

• ConvertVTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Stephen Aylward

• ExtractSkeleton (cli, built-in)
• GaussianBlurImageFilter (cli, built-in)

Stephen R Aylward

• ExpertAutomatedRegistration (cli, built-in)

Steve Pieper

• AtlasTests
• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)
• CenterlineComputation (scripted, bundled in VMTK extension)
• CompareVolumes (scripted, built-in)
• DataProbe (scripted, built-in)
• DICOM (scripted, built-in)
• DICOMDiffusionVolumePlugin
• DICOMLongitudinalPETCTPlugin
• DICOMScalarVolumePlugin
• DICOMSlicerDataBundlePlugin
• DicomUltrasoundPlugin
• DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
• Editor (scripted, built-in)
• Endoscopy (scripted, built-in)
• fiber_visibility_crash2438
• FiberBundleToLabelMap (scripted, bundled in SlicerDMRI extension)
• LabelStatistics (scripted, built-in)
• LandmarkRegistration (scripted, built-in)
• LevelSetSegmentation (scripted, bundled in VMTK extension)
• MultiVolumeExplorer (loadable, built-in)
• MultiVolumeImporter (scripted, built-in)
• PerformanceTests
• PETTumorSegmentationEffect (scripted, bundled in PETTumorSegmentation extension)
• Philips4dUsDicomPatcher (scripted, bundled in SlicerHeart extension)
• QuantitativeReporting (scripted, bundled in QuantitativeReporting extension)
• QuickTCGAEffect (scripted, bundled in SlicerPathology extension)
• RSNA2012ProstateDemo
• RSNAQuantTutorial
• RSNAVisTutorial
• SampleData (scripted, built-in)
• sceneImport2428
• SegmentEditorPETTumor (scripted, bundled in PETTumorSegmentation extension)
• SegmentStatistics (scripted, built-in)
• SelfTests
• SimpleFilters (scripted, built-in)
• slicerCloseCrashBug2590
• SlicerMRBTest
• SlicerToKiwiExporter (scripted, bundled in SlicerToKiwiExporter extension)
• ThresholdThreadingTest
• VectorToScalarVolume (scripted, built-in)
• VesselnessFiltering (scripted, bundled in VMTK extension)
• ViewControllers (loadable, built-in)
• Volumes (loadable, built-in)
• XnatSlicer (scripted, bundled in XNATSlicer extension)

Steve Piepper

• SEGExporterSelfTest

Sunil Kumar

• XnatSlicer (scripted, bundled in XNATSlicer extension)

T

• DicomRtImportExportPlugin

t

• DicomRtImportExportPlugin

Tamas Ungi

• BreachWarning (loadable, bundled in SlicerIGT extension)
• BreachWarningSelfTest
• CollectFiducials (loadable, bundled in SlicerIGT extension)
• CreateModels (loadable, bundled in SlicerIGT extension)
• FiducialRegistrationWizard (loadable, bundled in SlicerIGT extension)
• FiducialsToModelRegistration (scripted, bundled in SlicerIGT extension)
• ModelRegistration (scripted, bundled in SlicerIGT extension)
• OpenIGTLinkRemote (loadable, bundled in SlicerIGT extension)
• PerkEvaluator (loadable, bundled in PerkTutor extension)
• PivotCalibration (loadable, bundled in SlicerIGT extension)
• PlusRemote (scripted, bundled in SlicerIGT extension)
• PythonMetricsCalculator (scripted, bundled in PerkTutor extension)
• ScoliosisMonitoring (scripted, bundled in Scoliosis extension)
• SpinalCurvatureMeasurement (scripted, bundled in Scoliosis extension)
• TransformFusion (loadable, bundled in SlicerIGT extension)
• TransformRecorder (loadable, bundled in PerkTutor extension)
• UltrasoundSnapshots (loadable, bundled in SlicerIGT extension)
• Viewpoint (scripted, bundled in SlicerIGT extension)
• VolumeResliceDriver (loadable, bundled in SlicerIGT extension)
• Watchdog (loadable, bundled in SlicerIGT extension)
• WatchdogSelfTest
• WorkflowSegmentation (loadable, bundled in PerkTutor extension)

Tammy DiPrima

• SlicerPathology (scripted, bundled in SlicerPathology extension)

the University of North Carolina at Chapel Hill

• IntensitySegmenter (cli, bundled in IntensitySegmenter extension)

Thijs van der Hulst

• AstroModeling (loadable, bundled in SlicerAstro extension)
• AstroSampleData (scripted, bundled in SlicerAstro extension)
• AstroSmoothing (loadable, bundled in SlicerAstro extension)
• AstroVolume (loadable, bundled in SlicerAstro extension)
• AstroWelcome (loadable, bundled in SlicerAstro extension)
• SlicerAstroDataProbe (scripted, bundled in SlicerAstro extension)

Thomas Lawson

• Wasp (scripted, bundled in Wasp extension)

Thomas Vaughan

• MarkupsToModel (loadable, bundled in SlicerIGT extension)
• TransformFusion (loadable, bundled in SlicerIGT extension)
• Viewpoint (scripted, bundled in SlicerIGT extension)

Tina Kapur

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Tobias Penzkofer

• iGyne (scripted, bundled in iGyne extension)

Tohru Tani

• CornerAnnotation (scripted, bundled in CornerAnnotation extension)

u

• DicomRtImportExportPlugin

U

• DicomRtImportExportPlugin

UNC Medical School

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)

UofM School Of Dentistry

• Growing (cli, bundled in CMFreg extension)

UofM School of Dentistry

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)

v

• DicomRtImportExportPlugin

Vince Magnotta

• DWIConvert (cli, built-in)

Vincent A. Magnotta

• BRAINSLabelStats (cli, built-in)

Vincent Magnotta

• BRAINSResample (cli, built-in)

Vinicius Boen

• ApplyMatrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• LabelAddition (cli, bundled in CMFreg extension)
• LabelExtraction (cli, bundled in CMFreg extension)
• MaskCreation (cli, bundled in CMFreg extension)
• NonGrowing (cli, bundled in CMFreg extension)
• SurfaceRegistration (scripted, bundled in CMFreg extension)

Vivek Narayan

• HeterogeneityCAD (scripted, bundled in OpenCAD extension)
• SegmentCAD (scripted, bundled in OpenCAD extension)

W

• DicomRtImportExportPlugin

Wendy Plesniak

• Annotations (loadable, built-in)
• PETStandardUptakeValueComputation (cli, built-in)
• PETSUVImageMaker (cli, bundled in LongitudinalPETCT extension)
• SceneViews (loadable, built-in)
• SUVFactorCalculator (cli, bundled in PETDICOMExtension extension)
• ViewControllers (loadable, built-in)
• Welcome (loadable, built-in)

Women's Hospital

• CIP_ (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_BodyComposition (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_CalciumScoring (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_Common (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_LesionModel (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_MIPViewer (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PAARatio (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_ParenchymaSubtypeTraining (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_PointsLabelling (scripted, bundled in Chest_Imaging_Platform extension)
• CIP_TracheaStentPlanning (scripted, bundled in Chest_Imaging_Platform extension)
• ClassifyFissureParticles (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFeatureStrength (cli, bundled in Chest_Imaging_Platform extension)
• ComputeFissureFeatureVectors (cli, bundled in Chest_Imaging_Platform extension)
• ConvertDicom (cli, bundled in Chest_Imaging_Platform extension)
• EnhanceFissuresInImage (cli, bundled in Chest_Imaging_Platform extension)
• ExecuteSystemCommand (cli, bundled in Chest_Imaging_Platform extension)
• FilterAirwayParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterFissureParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FilterVesselParticleData (cli, bundled in Chest_Imaging_Platform extension)
• FindPatchMatch (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLesionSegmentation (cli, bundled in Chest_Imaging_Platform extension)
• GenerateModel (cli, bundled in Chest_Imaging_Platform extension)
• GenerateParenchymaPhenotypes (cli, bundled in Chest_Imaging_Platform extension)
• GeneratePartialLungLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateSimpleLungMask (cli, bundled in Chest_Imaging_Platform extension)
• GenerateStenciledLabelMapFromParticles (cli, bundled in Chest_Imaging_Platform extension)
• ReadNRRDsWriteVTK (cli, bundled in Chest_Imaging_Platform extension)
• ReadVidaWriteCIP (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• RegionTypeLocationsToROIVolume (cli, bundled in Chest_Imaging_Platform extension)
• RemoveChestTypeFromLabelMapUsingParticles (cli, bundled in Chest_Imaging_Platform extension)
• RemoveParticlesFromParticlesDataSet (cli, bundled in Chest_Imaging_Platform extension)
• SegmentLungLobes (cli, bundled in Chest_Imaging_Platform extension)
• TransferRegionAndTypeIndicesToFromPoints (cli, bundled in Chest_Imaging_Platform extension)

women's hospital

• ComputeCrossSectionalArea (cli, bundled in Chest_Imaging_Platform extension)
• ComputeDistanceMap (cli, bundled in Chest_Imaging_Platform extension)
• ComputeIntensityStatistics (cli, bundled in Chest_Imaging_Platform extension)
• ConvertLabelMapValueToChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• CropLung (cli, bundled in Chest_Imaging_Platform extension)
• EvaluateLungLobeSegmentationResults (cli, bundled in Chest_Imaging_Platform extension)
• ExtractChestLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• ExtractParticlesFromChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• FilterConnectedComponents (cli, bundled in Chest_Imaging_Platform extension)
• FitLobeSurfaceModelsToParticleData (cli, bundled in Chest_Imaging_Platform extension)
• GenerateAtlasConvexHull (cli, bundled in Chest_Imaging_Platform extension)
• GenerateDistanceMapFromLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateImageSubVolumes (cli, bundled in Chest_Imaging_Platform extension)
• GenerateLobeSurfaceModels (cli, bundled in Chest_Imaging_Platform extension)
• GenerateMedianFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOtsuLungCast (cli, bundled in Chest_Imaging_Platform extension)
• GetStructuresInLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationKappa2D (cli, bundled in Chest_Imaging_Platform extension)
• GetTransformationSimilarityMetric (cli, bundled in Chest_Imaging_Platform extension)
• GraphCutsOptimization (cli, bundled in Chest_Imaging_Platform extension)
• LabelMapFromRegionAndTypePoints (cli, bundled in Chest_Imaging_Platform extension)
• LabelParticlesByChestRegionChestType (cli, bundled in Chest_Imaging_Platform extension)
• MaskOutLabelMapStructures (cli, bundled in Chest_Imaging_Platform extension)
• MergeChestLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• MergeParticleDataSets (cli, bundled in Chest_Imaging_Platform extension)
• PerformMorphological (cli, bundled in Chest_Imaging_Platform extension)
• PerturbParticles (cli, bundled in Chest_Imaging_Platform extension)
• ReadDicomWriteTags (cli, bundled in Chest_Imaging_Platform extension)
• ReadVTKWriteNRRDs (cli, bundled in Chest_Imaging_Platform extension)
• ReadWriteImageData (cli, bundled in Chest_Imaging_Platform extension)
• RegisterCT (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLabelMaps (cli, bundled in Chest_Imaging_Platform extension)
• RegisterLungAtlas (cli, bundled in Chest_Imaging_Platform extension)
• RemapLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• ResampleCT (cli, bundled in Chest_Imaging_Platform extension)
• ResampleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• RescaleLabelMap (cli, bundled in Chest_Imaging_Platform extension)
• SplitLeftLungRightLung (cli, bundled in Chest_Imaging_Platform extension)

Women's hospital

• ConvertChestRegionChestTypeToLabelMapValue (cli, bundled in Chest_Imaging_Platform extension)
• ExtractFissureBoundaryFromLobeMap (cli, bundled in Chest_Imaging_Platform extension)
• GenerateBinaryThinning3D (cli, bundled in Chest_Imaging_Platform extension)
• GenerateNLMFilteredImage (cli, bundled in Chest_Imaging_Platform extension)
• GenerateOverlayImages (cli, bundled in Chest_Imaging_Platform extension)
• QualityControl (cli, bundled in Chest_Imaging_Platform extension)

Women's Hospital. University College of Cork

• SegmentLungAirways (cli, bundled in Chest_Imaging_Platform extension)

Xiao Da

• DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
• T1Mapping (cli, bundled in T1Mapping extension)

Xiaodong Tao

• DWIConvert (cli, built-in)
• ModelToLabelMap (cli, built-in)
• SkullStripper (cli, bundled in SkullStripper extension)

Xiaojun Chen

• iGyne (scripted, bundled in iGyne extension)

y Wells

• iGyne (scripted, bundled in iGyne extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)

Yangming Ou

• DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
• T1Mapping (cli, bundled in T1Mapping extension)

Yanling Liu

• VolumeRendering (loadable, built-in)

Yi Gao

• CarreraSliceEffect (scripted, bundled in CarreraSlice extension)
• FastGrowCutEffect (scripted, bundled in FastGrowCutEffect extension)
• iGyne (scripted, bundled in iGyne extension)
• LAScarSegmenter (cli, bundled in LAScarSegmenter extension)
• NeedleFinder (scripted, bundled in NeedleFinder extension)
• RobustStatisticsSegmenter (cli, built-in)
• SlicerPathology (scripted, bundled in SlicerPathology extension)

Yinglin Lee

• TestGridTransformRegistration (cli, built-in)

Yingxuan Zhu

• PkModeling (cli, bundled in PkModeling extension)

Yinpeng Li

• ConvertVTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Yixun Liu

• BodyCentricCubicMesh (cli, bundled in CBC_3D_I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

Yogesh Rathi

• ConvertVTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Yong Zhang

• Annotations (loadable, built-in)

Yumin Yuan

• EMSegmentCommandLine (cli, built-in)

Yundi Shi

• ConvertVTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)