Difference between revisions of "Documentation/4.4/ModuleExtensionListing"
From Slicer Wiki
(This page has been updated using script slicer_wiki_extension_module_listing.py (rev edc772c). For more details: * https://github.com/Slicer/slicer-wiki-scripts * http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_) |
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215 modules: | 215 modules: | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | * Add Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * BRAINSDemon Warp <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSStrip Rotation <small>(cli, built-in)</small> | * BRAINSStrip Rotation <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * Checker Board Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 38: | Line 38: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * Create DICOMSeries <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Data Probe <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
| − | * DICOM <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> |
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
| − | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWITo DTIEstimation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * Endoscopy <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * Histogram Matching <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * Image Label Combine <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * Markups <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Mask Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Median Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * Multiply Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Open IGTLink IF <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Orient Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt export]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt import]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer xformwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
| − | * Probe Volume With Model <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * Reformat <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * Resample DTIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * Subject Hierarchy <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
| − | * Subtract Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
| − | * Tractography Display <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * Vector To Scalar Volume <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Modules by category = | = Modules by category = | ||
36 categories: | 36 categories: | ||
| Line 300: | Line 300: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] |
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] |
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] | ||
== CMF Registration == | == CMF Registration == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] |
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] |
=== Voxelbase Registration === | === Voxelbase Registration === | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] |
== Converters == | == Converters == | ||
| − | * Vector To Scalar Volume | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] |
| − | * Crop Volume | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] |
| − | * Orient Scalar Volume | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] |
| − | * Create DICOMSeries | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] |
== Developer Tools == | == Developer Tools == | ||
| − | * Event Broker | + | * [[Documentation/4.4/Modules/EventBroker|Event Broker]] |
| − | * Execution Model Tour | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] |
* Double Arrays | * Double Arrays | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
| − | * Cameras | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] |
| − | * Extension Wizard | + | * [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] |
=== DICOM Plugins === | === DICOM Plugins === | ||
* DICOMLongitudinal PETCTPlugin | * DICOMLongitudinal PETCTPlugin | ||
| − | * DICOMRWVMPlugin | + | * [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
| − | * DICOMPETSUVPlugin | + | * [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]] |
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
| Line 342: | Line 342: | ||
* DICOMSlicer Data Bundle Plugin | * DICOMSlicer Data Bundle Plugin | ||
=== Editor Extensions === | === Editor Extensions === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]] |
=== Matlab === | === Matlab === | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] |
== Diffusion == | == Diffusion == | ||
| − | * Tractography Display | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] |
* DICOM2Full Brain Tractography | * DICOM2Full Brain Tractography | ||
=== Diffusion Data Conversion === | === Diffusion Data Conversion === | ||
* DWIConvert | * DWIConvert | ||
=== Diffusion Tensor Images === | === Diffusion Tensor Images === | ||
| − | * Resample DTIVolume | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] |
| − | * Diffusion Tensor Scalar Measurements | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] |
| − | * Tractography Label Map Seeding | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] |
* Tractography Interactive Seeding | * Tractography Interactive Seeding | ||
=== Diffusion Weighted Images === | === Diffusion Weighted Images === | ||
| − | * DWIRician LMMSEFilter | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] |
| − | * Resample Scalar Vector DWIVolume | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] |
| − | * DWIJoint Rician LMMSEFilter | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] |
| − | * DWITo DTIEstimation | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] |
| − | * Diffusion Weighted Volume Masking | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] |
=== FiberAnalysis === | === FiberAnalysis === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] |
=== Tractography === | === Tractography === | ||
| − | * Fiber Bundle To Label Map | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] |
* Fiber Bundle Label Select | * Fiber Bundle Label Select | ||
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
== Endoscopy == | == Endoscopy == | ||
| − | * Endoscopy | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] |
== Examples == | == Examples == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Exporter == | == Exporter == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== File == | == File == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] |
== Filtering == | == Filtering == | ||
| − | * Extract Skeleton | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] |
| − | * Threshold Scalar Volume | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] |
| − | * N4ITKBias Field Correction | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] |
| − | * Simple Filters | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] |
| − | * Image Label Combine | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] |
| − | * Voting Binary Hole Filling Image Filter | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] |
| − | * Histogram Matching | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] |
| − | * Checker Board Filter | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] |
=== Arithmetic === | === Arithmetic === | ||
| − | * Multiply Scalar Volumes | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] |
| − | * Add Scalar Volumes | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] |
| − | * Cast Scalar Volume | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] |
| − | * Subtract Scalar Volumes | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] |
| − | * Mask Scalar Volume | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] |
=== Denoising === | === Denoising === | ||
| − | * Gradient Anisotropic Diffusion | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] |
| − | * Median Image Filter | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] |
| − | * Gaussian Blur Image Filter | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] |
| − | * Curvature Anisotropic Diffusion | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] |
=== Morphology === | === Morphology === | ||
| − | * Grayscale Fill Hole Image Filter | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]] |
| − | * Grayscale Grind Peak Image Filter | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] |
== IGT == | == IGT == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] |
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] |
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] |
| − | * Open IGTLink IF | + | * [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]] |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] |
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] |
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] |
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] |
== Informatics == | == Informatics == | ||
| − | * Annotations | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] |
| − | * Markups | + | * [[Documentation/4.4/Modules/Markups|Markups]] |
| − | * Units | + | * [[Documentation/4.4/Modules/Units|Units]] |
| − | * DICOM | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] |
| − | * Sample Data | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] |
| − | * Subject Hierarchy | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] |
| − | * Data | + | * [[Documentation/4.4/Modules/Data|Data]] |
| − | * | + | * [[Documentation/4.4/Modules/Colors|Colors]] |
| − | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] | |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
== Legacy == | == Legacy == | ||
=== Converters === | === Converters === | ||
| − | * BSpline To Deformation Field | + | * [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]] |
=== Diffusion === | === Diffusion === | ||
==== Denoising ==== | ==== Denoising ==== | ||
| − | * DWIUnbiased Non Local Means Filter | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] |
==== Diffusion Data Conversion ==== | ==== Diffusion Data Conversion ==== | ||
* DTIimport | * DTIimport | ||
* DTIexport | * DTIexport | ||
=== Filtering === | === Filtering === | ||
| − | * Otsu Threshold Image Filter | + | * [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] |
| − | * Resample Scalar Volume | + | * [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]] |
=== Registration === | === Registration === | ||
* Test Grid Transform Registration | * Test Grid Transform Registration | ||
| − | * Expert Automated Registration | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] |
=== Work in Progress === | === Work in Progress === | ||
==== Diffusion Tensor ==== | ==== Diffusion Tensor ==== | ||
| Line 465: | Line 465: | ||
* Diffusion Tensor Test | * Diffusion Tensor Test | ||
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] |
== MeshGeneration == | == MeshGeneration == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Bin Shrink]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] |
== MultiVolume Support == | == MultiVolume Support == | ||
| − | * Multi Volume Explorer | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] |
| − | * Multi Volume Importer | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] |
== Perk Tutor == | == Perk Tutor == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] |
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] |
== Plastimatch == | == Plastimatch == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] |
=== Registration === | === Registration === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer xformwarp]] |
=== Utilities === | === Utilities === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt export]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt import]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] |
== Quantification == | == Quantification == | ||
| − | * PETStandard Uptake Value Computation | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] |
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] |
| − | * Data Probe | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] |
=== ChangeQuantification === | === ChangeQuantification === | ||
| − | * [ | + | * [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] |
== Radiotherapy == | == Radiotherapy == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] |
== Registration == | == Registration == | ||
| − | * BRAINSResample | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] |
| − | * Transforms | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] |
* BRAINSResize | * BRAINSResize | ||
| − | * | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] |
| − | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] | |
* Perform Metric Test | * Perform Metric Test | ||
=== Specialized === | === Specialized === | ||
| − | * ACPCTransform | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] |
| − | * Fiducial Registration | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] |
* VBRAINSDemon Warp | * VBRAINSDemon Warp | ||
| − | * BRAINSDemon Warp | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] |
| − | * Reformat | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] |
== Segmentation == | == Segmentation == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] |
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
* EMSegment Quick | * EMSegment Quick | ||
| − | * Simple Region Growing Segmentation | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
| − | * | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] |
| − | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] | |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] |
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] |
=== Specialized === | === Specialized === | ||
* EMSegment Command Line | * EMSegment Command Line | ||
| − | * Robust Statistics Segmenter | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] |
* BRAINSROIAuto | * BRAINSROIAuto | ||
== Shape Analysis == | == Shape Analysis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Slicelets == | == Slicelets == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] | ||
== Surface Models == | == Surface Models == | ||
| − | * Surface Toolbox | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] |
| − | * Model To Label Map | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] |
| − | * Merge Models | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] |
| − | * Probe Volume With Model | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] |
| − | * Grayscale Model Maker | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] |
| − | * Label Map Smoothing | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] |
| − | * Model Maker | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] |
== Testing == | == Testing == | ||
* Self Tests | * Self Tests | ||
| Line 573: | Line 573: | ||
* CLI4Test | * CLI4Test | ||
* Threshold Threading Test | * Threshold Threading Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] |
* Performance Tests | * Performance Tests | ||
* Slicer MRBTest | * Slicer MRBTest | ||
| Line 611: | Line 611: | ||
* BRAINSDWICleanup | * BRAINSDWICleanup | ||
== Utilities == | == Utilities == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] |
* BRAINSStrip Rotation | * BRAINSStrip Rotation | ||
* EMSegment Transform To New Format | * EMSegment Transform To New Format | ||
| − | * Data Store | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] |
=== BRAINS === | === BRAINS === | ||
* BRAINSTransform Convert | * BRAINSTransform Convert | ||
| Line 622: | Line 622: | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] | * [http://slicer.vmtk.org/ Level Set Segmentation] | ||
== Wizards == | == Wizards == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] |
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] |
== Work in Progress == | == Work in Progress == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
=== Converters === | === Converters === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] |
=== Informatics === | === Informatics === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
==== TestCases ==== | ==== TestCases ==== | ||
* Reporting Self Test | * Reporting Self Test | ||
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] |
= Modules by contributing organization = | = Modules by contributing organization = | ||
71 contributing organizations: | 71 contributing organizations: | ||
| Line 708: | Line 708: | ||
* [[#while_at_GE|while at GE]] | * [[#while_at_GE|while at GE]] | ||
== Asclepios INRIA == | == Asclepios INRIA == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== AZE R&D == | == AZE R&D == | ||
* JRC2013Vis | * JRC2013Vis | ||
| Line 716: | Line 716: | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
* test tractography display | * test tractography display | ||
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== BWH == | == BWH == | ||
* Add Many Markups Fiducial Test | * Add Many Markups Fiducial Test | ||
* Change Tracker Self Test | * Change Tracker Self Test | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
| − | * DICOMRWVMPlugin | + | * [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
* Fiducial Layout Switch Bug1914 | * Fiducial Layout Switch Bug1914 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * Markups <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
* Markups In Compare Viewers Self Test | * Markups In Compare Viewers Self Test | ||
* Markups In Views Self Test | * Markups In Views Self Test | ||
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== BWH, SPL == | == BWH, SPL == | ||
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
== BWH, SUMS == | == BWH, SUMS == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== BWH/UAB == | == BWH/UAB == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== CARMA == | == CARMA == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 754: | Line 754: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== gatech == | == gatech == | ||
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
== GE == | == GE == | ||
| − | * Add Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * Checker Board Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
| − | * Create DICOMSeries <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * Execution Model Tour <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
| − | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * Histogram Matching <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * Median Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * Multiply Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Orient Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * Resample Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * Subtract Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
* View Controllers Slice Interpolation Bug1926 | * View Controllers Slice Interpolation Bug1926 | ||
| − | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
== Georgia Tech == | == Georgia Tech == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== IBM == | == IBM == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
== Isomics == | == Isomics == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Data Probe <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | * DICOM <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> |
| − | * Endoscopy <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
* Performance Tests | * Performance Tests | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
* RSNA2012Prostate Demo | * RSNA2012Prostate Demo | ||
* RSNAQuant Tutorial | * RSNAQuant Tutorial | ||
* RSNAVis Tutorial | * RSNAVis Tutorial | ||
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
* scene Import2428 | * scene Import2428 | ||
* Self Tests | * Self Tests | ||
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * Vector To Scalar Volume <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
== Isomics Inc. == | == Isomics Inc. == | ||
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
| Line 840: | Line 840: | ||
* Threshold Threading Test | * Threshold Threading Test | ||
== Isomics, pieper@isomics.com == | == Isomics, pieper@isomics.com == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Kingston General Hospital == | == Kingston General Hospital == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
== Kitware == | == Kitware == | ||
| − | * Cameras <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
| − | * Event Broker | + | * [[Documentation/4.4/Modules/EventBroker|Event Broker]] |
| − | * Expert Automated Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> |
| − | * Extension Wizard <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
| − | * Reformat <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> |
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Tractography Display <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
== Kitware) == | == Kitware) == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
== MGH == | == MGH == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== MGH, Boston == | == MGH, Boston == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Moka Creative, LLC, kumar.sunil.p@gmail.com == | == Moka Creative, LLC, kumar.sunil.p@gmail.com == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== MSC/NLM == | == MSC/NLM == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
== Noware == | == Noware == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
== Orobix == | == Orobix == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== PMH == | == PMH == | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
== PMH, Toronto == | == PMH, Toronto == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Princess Margaret Cancer Centre == | == Princess Margaret Cancer Centre == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Queen's == | == Queen's == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* Dicom Rt Import Self Test | * Dicom Rt Import Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* NAMIC Tutorial 2013June Self Test | * NAMIC Tutorial 2013June Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Subject Hierarchy <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
* Subject Hierarchy Core Plugins Self Test | * Subject Hierarchy Core Plugins Self Test | ||
* Subject Hierarchy Generic Self Test | * Subject Hierarchy Generic Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Queen's Universit == | == Queen's Universit == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== Queen's University == | == Queen's University == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
== Queen's University) Jaime Garcia-Guevara (Queen's University == | == Queen's University) Jaime Garcia-Guevara (Queen's University == | ||
* Breach Warning Self Test | * Breach Warning Self Test | ||
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
== RMP, PMH == | == RMP, PMH == | ||
* Dicom Sro Import Plugin | * Dicom Sro Import Plugin | ||
== SAIC-Frederick, NCI-Frederick == | == SAIC-Frederick, NCI-Frederick == | ||
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
== SBU == | == SBU == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== Shiga University of Medical Science in Japan == | == Shiga University of Medical Science in Japan == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== SINAPSE == | == SINAPSE == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
== SNR == | == SNR == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== SPL == | == SPL == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== SPL, BWH == | == SPL, BWH == | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * BSpline To Deformation Field <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]] <small>(cli, built-in)</small> |
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
| − | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
| − | * DWITo DTIEstimation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * Image Label Combine <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * Mask Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * Probe Volume With Model <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
== SPL, BWH, UPenn == | == SPL, BWH, UPenn == | ||
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
== SUMS == | == SUMS == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Surgical Planning Lab == | == Surgical Planning Lab == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
== UAB == | == UAB == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== UHN, Toronto == | == UHN, Toronto == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Uiowa == | == Uiowa == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 1,056: | Line 1,056: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== UNC == | == UNC == | ||
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
| − | * Resample DTIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Univ. of Iowa == | == Univ. of Iowa == | ||
| − | * DICOMPETSUVPlugin | + | * [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]] |
| − | * DICOMRWVMPlugin | + | * [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
== University 'Magna Graecia' of Catanzaro == | == University 'Magna Graecia' of Catanzaro == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== University of Iowa == | == University of Iowa == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== University of Iowa) and Andrey Fedorov (SPL == | == University of Iowa) and Andrey Fedorov (SPL == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== UPenn == | == UPenn == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
== Utah == | == Utah == | ||
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== UVa == | == UVa == | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
== UWA == | == UWA == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== WashU-St. Louis, dmarcus@wustl.edu == | == WashU-St. Louis, dmarcus@wustl.edu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== while at GE == | == while at GE == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
= Modules by contributing individual = | = Modules by contributing individual = | ||
185 contributing individuals: | 185 contributing individuals: | ||
| Line 1,289: | Line 1,289: | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Akila Viswanathan == | == Akila Viswanathan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Alan Morris == | == Alan Morris == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,302: | Line 1,302: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Alex Yarmakovich == | == Alex Yarmakovich == | ||
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
== Alex Yarmarkovich == | == Alex Yarmarkovich == | ||
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * Image Label Combine <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
== Ali Ghayoor == | == Ali Ghayoor == | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
== Alireza Mehrtash == | == Alireza Mehrtash == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== Amelie Meyer == | == Amelie Meyer == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== Analysis Laboratory == | == Analysis Laboratory == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
== Andras Lasso == | == Andras Lasso == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== Andreas Freudling == | == Andreas Freudling == | ||
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * BSpline To Deformation Field <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
* Change Tracker Self Test | * Change Tracker Self Test | ||
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | * DICOMRWVMPlugin | + | * [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
* DICOMSegmentation Plugin | * DICOMSegmentation Plugin | ||
| − | * [ | + | * [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== Anonymous == | == Anonymous == | ||
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
== Antonio Damato == | == Antonio Damato == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Antonio Tristan Vega == | == Antonio Tristan Vega == | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
== Anuja Sharma == | == Anuja Sharma == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== Beatriz Paniagua from Department of Orthodontics == | == Beatriz Paniagua from Department of Orthodontics == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
== Benjamin Long == | == Benjamin Long == | ||
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
== Benjamin Yvernault == | == Benjamin Yvernault == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
== Bill Lorensen == | == Bill Lorensen == | ||
| − | * Add Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Checker Board Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
| − | * Create DICOMSeries <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * Execution Model Tour <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
| − | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * Histogram Matching <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * Median Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Multiply Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Orient Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * Subtract Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
| − | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
== Brad Davis == | == Brad Davis == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
== Brian Zenger == | == Brian Zenger == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,453: | Line 1,453: | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Carl-Fredrik Westin == | == Carl-Fredrik Westin == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez == | == Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
== Casey B Goodlett == | == Casey B Goodlett == | ||
| − | * Expert Automated Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> |
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
== Charles Marion == | == Charles Marion == | ||
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
== Christian Baumgartner == | == Christian Baumgartner == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Csaba Pinter == | == Csaba Pinter == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* Dicom Rt Import Self Test | * Dicom Rt Import Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* NAMIC Tutorial 2013June Self Test | * NAMIC Tutorial 2013June Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Subject Hierarchy <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
* Subject Hierarchy Core Plugins Self Test | * Subject Hierarchy Core Plugins Self Test | ||
* Subject Hierarchy Generic Self Test | * Subject Hierarchy Generic Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Daniel Blezek == | == Daniel Blezek == | ||
| − | * Execution Model Tour <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
== Daniel Haehn == | == Daniel Haehn == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== Danny Perry == | == Danny Perry == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Demian Wassermann == | == Demian Wassermann == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
* test tractography display | * test tractography display | ||
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
== Dinggang Shen == | == Dinggang Shen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
== Dirk Padfield == | == Dirk Padfield == | ||
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
== Dominik Meier == | == Dominik Meier == | ||
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
== e == | == e == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,524: | Line 1,524: | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
== Ethan Ulrich == | == Ethan Ulrich == | ||
| − | * DICOMPETSUVPlugin | + | * [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]] |
| − | * | + | * [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
| − | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | |
== Eugene Kholmovski == | == Eugene Kholmovski == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
== ez == | == ez == | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== Francois Budin == | == Francois Budin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * Resample DTIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
== Franklin King == | == Franklin King == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
== Greg Gardner == | == Greg Gardner == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Greg Harris == | == Greg Harris == | ||
| − | * BRAINSDemon Warp <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
== Greg Sharp == | == Greg Sharp == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Gregory Sharp == | == Gregory Sharp == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Guido Gerig == | == Guido Gerig == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
== Guillaume Pernelle == | == Guillaume Pernelle == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Hans J. Johnson == | == Hans J. Johnson == | ||
| − | * BRAINSDemon Warp <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
== Hans Johnson == | == Hans Johnson == | ||
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== hans-johnson -at- uiowa.edu == | == hans-johnson -at- uiowa.edu == | ||
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
== http://www.psychiatry.uiowa.edu == | == http://www.psychiatry.uiowa.edu == | ||
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
== i == | == i == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Ipek Oguz == | == Ipek Oguz == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Ivan Kolesov == | == Ivan Kolesov == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== Jan Egger == | == Jan Egger == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== Jean-Baptiste Berger == | == Jean-Baptiste Berger == | ||
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
== Jean-Christophe Fillion-Robin == | == Jean-Christophe Fillion-Robin == | ||
* CLI4Test | * CLI4Test | ||
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
== Jennifer Andrea == | == Jennifer Andrea == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Jessica Forbes == | == Jessica Forbes == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
== Jim Miller == | == Jim Miller == | ||
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
* View Controllers Slice Interpolation Bug1926 | * View Controllers Slice Interpolation Bug1926 | ||
== Johan Andruejol == | == Johan Andruejol == | ||
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
== John Evans == | == John Evans == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== Josh Cates == | == Josh Cates == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,659: | Line 1,659: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Joy Matsui == | == Joy Matsui == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Julien Finet == | == Julien Finet == | ||
| − | * Cameras <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
| − | * Event Broker | + | * [[Documentation/4.4/Modules/EventBroker|Event Broker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Tractography Display <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
== Julien Jomier == | == Julien Jomier == | ||
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== K == | == K == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,698: | Line 1,698: | ||
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Kent WIlliams == | == Kent WIlliams == | ||
* BRAINSStrip Rotation <small>(cli, built-in)</small> | * BRAINSStrip Rotation <small>(cli, built-in)</small> | ||
| Line 1,707: | Line 1,707: | ||
== Kevin Wang == | == Kevin Wang == | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* Dicom Sro Import Plugin | * Dicom Sro Import Plugin | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
== Kilian Pohl == | == Kilian Pohl == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== Kyle Sunderl == | == Kyle Sunderl == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== l == | == l == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Lauren Barber == | == Lauren Barber == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Lauren O'Donnell == | == Lauren O'Donnell == | ||
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * Probe Volume With Model <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Liangjia Zhu == | == Liangjia Zhu == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== Luca Antiga == | == Luca Antiga == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== m == | == m == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Marc Niethammer == | == Marc Niethammer == | ||
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
== Marcel Prastawa prastawa@sci.utah.edu == | == Marcel Prastawa prastawa@sci.utah.edu == | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| Line 1,770: | Line 1,770: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Markus Van Tol == | == Markus Van Tol == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== Martin Styner == | == Martin Styner == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Mason Winsauer == | == Mason Winsauer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Matt Lougheed == | == Matt Lougheed == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== Mattea Welch == | == Mattea Welch == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
== Matthew Holden == | == Matthew Holden == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
== Matthew S. Holden == | == Matthew S. Holden == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
== Matthew Woehlke == | == Matthew Woehlke == | ||
| − | * Extension Wizard <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> |
== Michael Jeulin-Lagarrigue == | == Michael Jeulin-Lagarrigue == | ||
| − | * Reformat <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> |
== Minjeong Kim == | == Minjeong Kim == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
== Nabgha Fahrat == | == Nabgha Fahrat == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Neuro Image Resarch == | == Neuro Image Resarch == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Nicholas Herlambang == | == Nicholas Herlambang == | ||
* JRC2013Vis | * JRC2013Vis | ||
== Nick Tustison == | == Nick Tustison == | ||
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
== Nicole Aucoin == | == Nicole Aucoin == | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
* Add Many Markups Fiducial Test | * Add Many Markups Fiducial Test | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
* Fiducial Layout Switch Bug1914 | * Fiducial Layout Switch Bug1914 | ||
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * Markups <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
* Markups In Compare Viewers Self Test | * Markups In Compare Viewers Self Test | ||
* Markups In Views Self Test | * Markups In Views Self Test | ||
| − | * Mask Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== p == | == p == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Paolo Zaffino == | == Paolo Zaffino == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== Pengdong Xiao == | == Pengdong Xiao == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
== Peter Black == | == Peter Black == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
== Peter Karasev == | == Peter Karasev == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== Peter Savadjiev == | == Peter Savadjiev == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Pierre Seroul == | == Pierre Seroul == | ||
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== Please direct questions or suggestions to http://groups.google.com/group/plastimatch == | == Please direct questions or suggestions to http://groups.google.com/group/plastimatch == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt export]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt import]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer xformwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== Polina Goll == | == Polina Goll == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== R == | == R == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,896: | Line 1,896: | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Raul San Jose == | == Raul San Jose == | ||
| − | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
| − | * DWITo DTIEstimation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
== Rob MacLeod == | == Rob MacLeod == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,910: | Line 1,910: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Ron Kikinis == | == Ron Kikinis == | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | * Mask Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
== Ross Whitaker == | == Ross Whitaker == | ||
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== S == | == S == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Salma Bengali == | == Salma Bengali == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,950: | Line 1,950: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
== Sam Song == | == Sam Song == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
== Santiago Aja Fern == | == Santiago Aja Fern == | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
== Sebastien Barré == | == Sebastien Barré == | ||
| − | * Cameras <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
== Sebastien Barre == | == Sebastien Barre == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Shigeyuki Naka == | == Shigeyuki Naka == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Soichiro Tani == | == Soichiro Tani == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Sonia Pujol == | == Sonia Pujol == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
== Stefan Lienhard == | == Stefan Lienhard == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Stephen Aylward == | == Stephen Aylward == | ||
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
== Stephen R Aylward == | == Stephen R Aylward == | ||
| − | * Expert Automated Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> |
== Steve Pieper == | == Steve Pieper == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Data Probe <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | * DICOM <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> |
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
* DICOMLongitudinal PETCTPlugin | * DICOMLongitudinal PETCTPlugin | ||
* DICOMScalar Volume Plugin | * DICOMScalar Volume Plugin | ||
* DICOMSlicer Data Bundle Plugin | * DICOMSlicer Data Bundle Plugin | ||
| − | * Endoscopy <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
* Performance Tests | * Performance Tests | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
* RSNA2012Prostate Demo | * RSNA2012Prostate Demo | ||
* RSNAQuant Tutorial | * RSNAQuant Tutorial | ||
* RSNAVis Tutorial | * RSNAVis Tutorial | ||
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
* scene Import2428 | * scene Import2428 | ||
* Self Tests | * Self Tests | ||
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
* Slicer MRBTest | * Slicer MRBTest | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Threshold Threading Test | * Threshold Threading Test | ||
| − | * Vector To Scalar Volume <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Sylvain Bouix == | == Sylvain Bouix == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Sylvain Gouttard == | == Sylvain Gouttard == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
== t == | == t == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== Tamas Ungi == | == Tamas Ungi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
* Breach Warning Self Test | * Breach Warning Self Test | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
== the University of North Carolina at Chapel Hill == | == the University of North Carolina at Chapel Hill == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
== Tina Kapur == | == Tina Kapur == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Tobias Penzkofer == | == Tobias Penzkofer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
== Tohru Tani == | == Tohru Tani == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== UNC Medical School == | == UNC Medical School == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== UofM School Of Dentistry == | == UofM School Of Dentistry == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== UofM School of Dentistry == | == UofM School of Dentistry == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Vince Magnotta == | == Vince Magnotta == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 2,073: | Line 2,073: | ||
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
== Vincent Magnotta == | == Vincent Magnotta == | ||
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== Vivek Narayan == | == Vivek Narayan == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
== Wendy Plesniak == | == Wendy Plesniak == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
== Xiaodong Tao == | == Xiaodong Tao == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
== Xiaofeng Liu == | == Xiaofeng Liu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
== Xiaojun Chen == | == Xiaojun Chen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
== y Wells == | == y Wells == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== Yanling Liu == | == Yanling Liu == | ||
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
== Yi Gao == | == Yi Gao == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Yinglin Lee == | == Yinglin Lee == | ||
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
== Yingxuan Zhu == | == Yingxuan Zhu == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
== Yinpeng Li == | == Yinpeng Li == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== Yogesh Rathi == | == Yogesh Rathi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== Yong Zhang == | == Yong Zhang == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
== Yumin Yuan == | == Yumin Yuan == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Yundi Shi == | == Yundi Shi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
= Modules by type = | = Modules by type = | ||
3 types: | 3 types: | ||
| Line 2,142: | Line 2,142: | ||
== cli == | == cli == | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | * Add Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * BRAINSDemon Warp <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSStrip Rotation <small>(cli, built-in)</small> | * BRAINSStrip Rotation <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * BSpline To Deformation Field <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]] <small>(cli, built-in)</small> |
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Checker Board Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 2,169: | Line 2,169: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * Create DICOMSeries <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWITo DTIEstimation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * Execution Model Tour <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
| − | * Expert Automated Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * Image Label Combine <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * Median Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * Multiply Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Orient Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt export]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt import]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer xformwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Probe Volume With Model <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
| − | * Resample DTIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * Subtract Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
== loadable == | == loadable == | ||
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Cameras <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * Markups <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Open IGTLink IF <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Reformat <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * Subject Hierarchy <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
| − | * Tractography Display <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
== scripted == | == scripted == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * Data Probe <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | * DICOM <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> |
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * Endoscopy <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
| − | * Extension Wizard <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> |
| − | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small> |
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
| − | * Vector To Scalar Volume <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Modules by extension = | = Modules by extension = | ||
55 extensions: | 55 extensions: | ||
| Line 2,445: | Line 2,445: | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
== AirwaySegmentation == | == AirwaySegmentation == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== builtin == | == builtin == | ||
| − | * ACPCTransform <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | * Add Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Annotations <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> |
| − | * BRAINSDemon Warp <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * BRAINSFit <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * BRAINSResample <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSStrip Rotation <small>(cli, built-in)</small> | * BRAINSStrip Rotation <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * BSpline To Deformation Field <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]] <small>(cli, built-in)</small> |
| − | * Cameras <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
| − | * Cast Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * Checker Board Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
| − | * Colors <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * Create DICOMSeries <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * Crop Volume <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Data <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * Data Probe <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | * Data Store <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | * DICOM <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> |
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWIRician LMMSEFilter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * DWITo DTIEstimation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> |
| − | * EMSegment <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * Endoscopy <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
| − | * Execution Model Tour <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
| − | * Expert Automated Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> |
| − | * Extension Wizard <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> |
| − | * Extract Skeleton <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
| − | * Fiducial Registration <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> |
| − | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * Grayscale Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * Histogram Matching <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * Image Label Combine <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * Label Map Smoothing <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * Markups <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
| − | * Mask Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Median Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * Merge Models <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * Model Maker <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * Models <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * Model To Label Map <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * Multiply Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Multi Volume Explorer <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * Multi Volume Importer <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | * N4ITKBias Field Correction <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * Open IGTLink IF <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]] <small>(loadable, built-in)</small> |
| − | * Orient Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] <small>(cli, built-in)</small> |
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * Probe Volume With Model <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
| − | * Reformat <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> |
| − | * Resample DTIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
| − | * Resample Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Robust Statistics Segmenter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * Sample Data <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * Scene Views <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | * Simple Filters <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * Subject Hierarchy <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
| − | * Subtract Scalar Volumes <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * Surface Toolbox <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * Threshold Scalar Volume <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> |
| − | * Tractography Display <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * Tractography Label Map Seeding <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
| − | * Transforms <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | * Units <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Units|Units]] <small>(loadable, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * Vector To Scalar Volume <small>(scripted, built-in)</small> | + | * [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
| − | * View Controllers <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * Volume Rendering <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * Volumes <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | + | * [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
| − | * Welcome <small>(loadable, built-in)</small> | + | * [[Documentation/4.4/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
== Cardiac_MRI_Toolkit == | == Cardiac_MRI_Toolkit == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 2,563: | Line 2,563: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
== CardiacAgastonMeasures == | == CardiacAgastonMeasures == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
| Line 2,572: | Line 2,572: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== CBC_3D_I2MConversion == | == CBC_3D_I2MConversion == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
== ChangeTracker == | == ChangeTracker == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
== CleaverExtension == | == CleaverExtension == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== CMFreg == | == CMFreg == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small> |
== CornerAnnotation == | == CornerAnnotation == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== CurveMaker == | == CurveMaker == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small> |
== DiceComputation == | == DiceComputation == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small> |
== DTIAtlasFiberAnalyzer == | == DTIAtlasFiberAnalyzer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
== ErodeDilateLabel == | == ErodeDilateLabel == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
== FastGrowCutEffect == | == FastGrowCutEffect == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
== FinslerTractography == | == FinslerTractography == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
== GelDosimetryAnalysis == | == GelDosimetryAnalysis == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
== GyroGuide == | == GyroGuide == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== IASEM == | == IASEM == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small> |
== iGyne == | == iGyne == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small> |
== ImageMaker == | == ImageMaker == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small> |
== IntensitySegmenter == | == IntensitySegmenter == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
== LAScarSegmenter == | == LAScarSegmenter == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== LongitudinalPETCT == | == LongitudinalPETCT == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== MABMIS == | == MABMIS == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small> |
== MatlabBridge == | == MatlabBridge == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
== MeshToLabelMap == | == MeshToLabelMap == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
== MultidimData == | == MultidimData == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small> |
== NeedleFinder == | == NeedleFinder == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
== OpenCAD == | == OpenCAD == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small> |
== PBNRR == | == PBNRR == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small> |
== PercutaneousApproachAnalysis == | == PercutaneousApproachAnalysis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== PerkTutor == | == PerkTutor == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
== PETDICOMExtension == | == PETDICOMExtension == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== PkModeling == | == PkModeling == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small> |
== PortPlacement == | == PortPlacement == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small> |
== PyDevRemoteDebug == | == PyDevRemoteDebug == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
== Reporting == | == Reporting == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small> |
== ResectionPlanner == | == ResectionPlanner == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small> |
== Scoliosis == | == Scoliosis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small> |
== SegmentationAidedRegistration == | == SegmentationAidedRegistration == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== SlicerExtension-VMTK == | == SlicerExtension-VMTK == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| Line 2,682: | Line 2,682: | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== SlicerIGT == | == SlicerIGT == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
== SlicerRT == | == SlicerRT == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Contours|Contours]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt export]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer dicomrt import]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer xformwarp]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small> |
== SlicerToKiwiExporter == | == SlicerToKiwiExporter == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
== SobolevSegmenter == | == SobolevSegmenter == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== SwissSkullStripper == | == SwissSkullStripper == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
== TCIABrowser == | == TCIABrowser == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
== ThingiverseBrowser == | == ThingiverseBrowser == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== TrackerStabilizer == | == TrackerStabilizer == | ||
| − | * [ | + | * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== UKFTractography == | == UKFTractography == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]] <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small> |
== VolumeClip == | == VolumeClip == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== WindowLevelEffect == | == WindowLevelEffect == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Extensions by name = | = Extensions by name = | ||
54 extensions: | 54 extensions: | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] |
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEM]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
= Extensions by category = | = Extensions by category = | ||
25 categories: | 25 categories: | ||
| Line 2,830: | Line 2,830: | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
== Developer Tools == | == Developer Tools == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
== Diffusion == | == Diffusion == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] |
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
== Exporter == | == Exporter == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Filtering == | == Filtering == | ||
=== Morphology === | === Morphology === | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
== IGT == | == IGT == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] |
== Informatics == | == Informatics == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] |
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEM]] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
== Quantification == | == Quantification == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Radiotherapy == | == Radiotherapy == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Registration == | == Registration == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Remote == | == Remote == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Scoliosis == | == Scoliosis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] |
== Segmentation == | == Segmentation == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] |
== Shape Analysis == | == Shape Analysis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Tractography == | == Tractography == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Training == | == Training == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] |
== Utilities == | == Utilities == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Vascular Modeling Toolkit == | == Vascular Modeling Toolkit == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Wizards == | == Wizards == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
= Extensions by contributing organization = | = Extensions by contributing organization = | ||
54 contributing organizations: | 54 contributing organizations: | ||
| Line 2,958: | Line 2,958: | ||
* [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]] | * [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]] | ||
== Asclepios INRIA) and Nikos Chrisochoides (CRTC == | == Asclepios INRIA) and Nikos Chrisochoides (CRTC == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Boston Childrens Hospital == | == Boston Childrens Hospital == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
== BWH == | == BWH == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== BWH & MGH == | == BWH & MGH == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| Line 2,982: | Line 2,982: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Crisalix == | == Crisalix == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Department of Neurosurgery, PLA General Hospital, Beijing, China == | == Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Department of Orthodontics, UNC == | == Department of Orthodontics, UNC == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
== GE == | == GE == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== GE GLobal Research == | == GE GLobal Research == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
== GT == | == GT == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Isomics == | == Isomics == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Kitware == | == Kitware == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Massachusetts General Hospital == | == Massachusetts General Hospital == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
== Moka Creative LLC, Washington University in St. Louis == | == Moka Creative LLC, Washington University in St. Louis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== NIRAL, UNC == | == NIRAL, UNC == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
== Noware == | == Noware == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Orobix == | == Orobix == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] |
== PMH == | == PMH == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
== Queen's University == | == Queen's University == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
== SBU == | == SBU == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] |
== Shiga University of Medical Science, Japan == | == Shiga University of Medical Science, Japan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
== SPL == | == SPL == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
== SPL and BWH == | == SPL and BWH == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== SRI == | == SRI == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Stony Brook University == | == Stony Brook University == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Surgical Planning Lab == | == Surgical Planning Lab == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== UAB == | == UAB == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] |
== UIowa == | == UIowa == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
== UNC == | == UNC == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] |
== University of Bern == | == University of Bern == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== University of Iowa == | == University of Iowa == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| Line 3,091: | Line 3,091: | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
== Utah == | == Utah == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== UWA == | == UWA == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Washington University in St. Louis == | == Washington University in St. Louis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== yogesh@bwh.harvard.edu == | == yogesh@bwh.harvard.edu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
= Extensions by contributing individual = | = Extensions by contributing individual = | ||
125 contributing individuals: | 125 contributing individuals: | ||
| Line 3,218: | Line 3,218: | ||
* [[#Yundi_Shi|Yundi Shi]] | * [[#Yundi_Shi|Yundi Shi]] | ||
== Akila Viswanathan == | == Akila Viswanathan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Alan Morris == | == Alan Morris == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Alex Yarmarkovich == | == Alex Yarmarkovich == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
== Alireza Mehrtash == | == Alireza Mehrtash == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
== Andras Lasso == | == Andras Lasso == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] |
== Andre Mastmeyer == | == Andre Mastmeyer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
== Andriy Fedorov == | == Andriy Fedorov == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Antonio Damato == | == Antonio Damato == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Antonio Tristan-Vega == | == Antonio Tristan-Vega == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] |
== Arnaud Gelas == | == Arnaud Gelas == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] |
== Beatriz Paniagua == | == Beatriz Paniagua == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
== Bill Lorensen == | == Bill Lorensen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IASEM|IASEM]] |
== Brig Bagley == | == Brig Bagley == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] |
== Carl-Fredrik Westin == | == Carl-Fredrik Westin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Christian Baumgartner == | == Christian Baumgartner == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Csaba Pinter == | == Csaba Pinter == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Daniel Haehn == | == Daniel Haehn == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Danny Perry == | == Danny Perry == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Demian Wasssermann == | == Demian Wasssermann == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
== Dinggang Shen == | == Dinggang Shen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
== Ethan Ulrich == | == Ethan Ulrich == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| Line 3,303: | Line 3,303: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Francois Budin == | == Francois Budin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Franklin King == | == Franklin King == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] |
== Greg Gardner == | == Greg Gardner == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Greg Sharp == | == Greg Sharp == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
== Guillaume Pernelle == | == Guillaume Pernelle == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Hans Johnson == | == Hans Johnson == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Ipek Oguz == | == Ipek Oguz == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Ivan Kolesov == | == Ivan Kolesov == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Jan Egger == | == Jan Egger == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== Jean-Christophe Fillion-Robin == | == Jean-Christophe Fillion-Robin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Jennifer Andrea == | == Jennifer Andrea == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| Line 3,343: | Line 3,343: | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
== Jiashu Zhang == | == Jiashu Zhang == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Jim Miller == | == Jim Miller == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] |
== Josh Cates == | == Josh Cates == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Julien Finet == | == Julien Finet == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] |
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
== Karl Fritscher == | == Karl Fritscher == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Kent Williams == | == Kent Williams == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Kevin Wang == | == Kevin Wang == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] |
== Kilian Pohl == | == Kilian Pohl == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
== Lauren Barber == | == Lauren Barber == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| Line 3,384: | Line 3,384: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
== Luca Antiga == | == Luca Antiga == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Mahnaz Maddah == | == Mahnaz Maddah == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Manson Winsauer == | == Manson Winsauer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
== Marcel Prastawa == | == Marcel Prastawa == | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
== Martin Styner == | == Martin Styner == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Matt Lougheed == | == Matt Lougheed == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] |
== Mattea Welch == | == Mattea Welch == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Matthew Holden == | == Matthew Holden == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] |
== Matthew S. Holden == | == Matthew S. Holden == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] |
== Mauricio Reyes == | == Mauricio Reyes == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Ming-ching Chang == | == Ming-ching Chang == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Minjeong Kim == | == Minjeong Kim == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
== Nabgha Fahrat == | == Nabgha Fahrat == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Nicole Aucoin == | == Nicole Aucoin == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Patricio Vela == | == Patricio Vela == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== Pengdong Xiao == | == Pengdong Xiao == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] |
== Peter Black == | == Peter Black == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
== Peter Karasev == | == Peter Karasev == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Peter Savadjiev == | == Peter Savadjiev == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] |
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Rick Herrick == | == Rick Herrick == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Rob MacLeod == | == Rob MacLeod == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Ron Kikinis == | == Ron Kikinis == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== Ryan Eckbo == | == Ryan Eckbo == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== S == | == S == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Salma Bengali == | == Salma Bengali == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== Sam Song == | == Sam Song == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Stefan Bauer == | == Stefan Bauer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Stefan Lienhard == | == Stefan Lienhard == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Steve Pieper == | == Steve Pieper == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/Reporting|Reporting]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] |
== Sylvain Bouix == | == Sylvain Bouix == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Tamas Ungi == | == Tamas Ungi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] |
== Thomas Fejes == | == Thomas Fejes == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Tina Kapur == | == Tina Kapur == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Tobias Penzkofer == | == Tobias Penzkofer == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CMFreg|CMFreg]] |
== Vivek Narayan == | == Vivek Narayan == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] |
== Xiaofeng Liu == | == Xiaofeng Liu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/MABMIS|MABMIS]] |
== Xiaojun Chen == | == Xiaojun Chen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Xiaolei Chen == | == Xiaolei Chen == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] |
== y Wells == | == y Wells == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
== Yi Gao == | == Yi Gao == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/iGyne|i Gyne]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Yingxuan Zhu == | == Yingxuan Zhu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] |
== Yinpeng Li == | == Yinpeng Li == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.4/Extensions/PBNRR|PBNRR]] |
== Yogesh Rathi == | == Yogesh Rathi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
== Yundi Shi == | == Yundi Shi == | ||
| − | * [ | + | * [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] |
Revision as of 07:43, 25 December 2014
Home < Documentation < 4.4 < ModuleExtensionListing
- Modules by category
- Modules by name
- Modules by contributing organization
- Modules by contributing individual
- Modules by type
- Modules by extension
- Extensions by category
- Extensions by name
- Extensions by contributing organization
- Extensions by contributing individual
List of extensions known to be broken
Modules by name
215 modules:
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Annotations (loadable, built-in)
- Apply Matrix (cli, bundled in CMFreg extension)
- Beams (loadable, bundled in Slicer RT extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Cast Scalar Volume (cli, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Convert VTK (cli, bundled in UKFTractography extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Create DICOMSeries (cli, built-in)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Downsize (cli, bundled in CMFreg extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiducial Registration (cli, built-in)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- i Gyne (scripted, bundled in i Gyne extension)
- Image Label Combine (cli, built-in)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Isodose (loadable, bundled in Slicer RT extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Non Growing (cli, bundled in CMFreg extension)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Orient Scalar Volume (cli, built-in)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- PBNRR (cli, bundled in PBNRR extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Perform Metric Test (cli, built-in)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Probe Volume With Model (cli, built-in)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Views (loadable, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Threshold Scalar Volume (cli, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by category
36 categories:
- BRAINS
- Cardiac MRI Toolkit
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Endoscopy
- Examples
- Exporter
- File
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multidimensional data
- Multi Volume Support
- Perk Tutor
- Plastimatch
- Quantification
- Radiotherapy
- Registration
- Segmentation
- Shape Analysis
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Vascular Modeling Toolkit
- Wizards
- Work in Progress
- XNATSlicer
BRAINS
LabelStatistics
- BRAINSLabel Stats
Cardiac MRI Toolkit
- CMRToolkit Connected Threshold Filter
- CMRToolkit Isolated Connected Filter
- CMRToolkit Wizard
- CMRToolkit Inhomogeneity Correction
- CMRToolkit PVAntrum Cut
- CMRToolkit Axial Dilate
- Scar Visualization
- CMRToolkit Boolean REMOVEFilter
- LASegmentation Workflow
- CMRToolkit Automatic Left Atrial Scar
- CMRToolkit Registration
- CMRToolkit Registration BRAINSFit
CMF Registration
Voxelbase Registration
Converters
Developer Tools
- Event Broker
- Execution Model Tour
- Double Arrays
- Py Dev Remote Debug
- Cameras
- Extension Wizard
- Image Maker
DICOM Plugins
- DICOMLongitudinal PETCTPlugin
- DICOMRWVMPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- Dicom Rt Import Plugin
- DICOMDiffusion Volume Plugin
- DICOMSegmentation Plugin
- Dicom Sro Import Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions
Matlab
Diffusion
- Tractography Display
- DICOM2Full Brain Tractography
Diffusion Data Conversion
- DWIConvert
Diffusion Tensor Images
- Resample DTIVolume
- Diffusion Tensor Scalar Measurements
- Tractography Label Map Seeding
- Tractography Interactive Seeding
Diffusion Weighted Images
- DWIRician LMMSEFilter
- Resample Scalar Vector DWIVolume
- DWIJoint Rician LMMSEFilter
- DWITo DTIEstimation
- Finsler Tractography
- Finsler Backtracing
- Diffusion Weighted Volume Masking
FiberAnalysis
Tractography
- Fiber Bundle To Label Map
- UKFTractography
- Fiber Bundle Label Select
Editor Effects
Endoscopy
Examples
Exporter
File
Filtering
- Extract Skeleton
- Threshold Scalar Volume
- N4ITKBias Field Correction
- Simple Filters
- Image Label Combine
- Voting Binary Hole Filling Image Filter
- Histogram Matching
- Checker Board Filter
Arithmetic
- Multiply Scalar Volumes
- Add Scalar Volumes
- Cast Scalar Volume
- Subtract Scalar Volumes
- Mask Scalar Volume
Denoising
- Gradient Anisotropic Diffusion
- Median Image Filter
- Gaussian Blur Image Filter
- Curvature Anisotropic Diffusion
Morphology
IGT
- Resection Volume
- Volume Reslice Driver
- Collect Fiducials
- Percutaneous Approach Analysis
- Create Models
- Port Placement
- Open IGTLink IF
- Tracker Stabilizer
- Path Explorer
- Ultrasound Snapshots
- Transform Fusion
- Breach Warning
- Gyro Guide
- Fiducial Registration Wizard
- Open IGTLink Remote
- Plus Remote
- i Gyne
- Needle Finder
- Fiducials To Model Registration
- Pivot Calibration
- Corner Annotation
Informatics
Legacy
Converters
Diffusion
Denoising
Diffusion Data Conversion
- DTIimport
- DTIexport
Filtering
Registration
- Test Grid Transform Registration
- Expert Automated Registration
Work in Progress
Diffusion Tensor
Test
- Diffusion Tensor Test
Mesh Generation
MeshGeneration
Microscopy
Multidimensional data
MultiVolume Support
Perk Tutor
Plastimatch
Registration
Utilities
Quantification
- PETStandard Uptake Value Computation
- SUVFactor Calculator
- Spinal Curvature Measurement
- Pk Modeling
- Heterogeneity CAD
- PETSUVImage Maker
- Dice Computation
- Data Probe
ChangeQuantification
Radiotherapy
- Contour Comparison
- Dicom Rt Import
- Beams
- Dvh Comparison
- Isodose
- Contours
- Dose Accumulation
- Dicom Rt Export
- Dose Comparison
- Contour Morphology
- Planar Image
- Dicom Sro Import
- Dose Volume Histogram
Registration
- BRAINSResample
- Transforms
- BRAINSResize
- BRAINSFit
- PBNRR
- Perform Metric Test
Specialized
- ACPCTransform
- Fiducial Registration
- VBRAINSDemon Warp
- BRAINSDemon Warp
- Reformat
Segmentation
- IGR3D MABMIS Training
- ABC
- EMSegment Quick
- Simple Region Growing Segmentation
- Intensity Segmenter
- EMSegment
- Volume Clip With Roi
- Segment CAD
- Swiss Skull Stripper
- Airway Segmentation CLI
- LAScar Segmenter
- Sobolev Segmenter
- Volume Clip With Model
- IGR3D MABMIS Testing
Specialized
- EMSegment Command Line
- Robust Statistics Segmenter
- BRAINSROIAuto
Shape Analysis
Slicelets
Surface Models
- Surface Toolbox
- Model To Label Map
- Merge Models
- Probe Volume With Model
- Grayscale Model Maker
- Label Map Smoothing
- Model Maker
Testing
- Self Tests
- CLIROITest
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring
- Performance Tests
- Slicer MRBTest
IGT Tests
- Breach Warning Self Test
SlicerRT Tests
- NAMIC Tutorial 2013June Self Test
- Dicom Rt Import Self Test
TestCases
- Slice Link Logic
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close
- test tractography display
- slicer Close Crash Bug2590
- Subject Hierarchy Generic Self Test
- View Controllers Slice Interpolation Bug1926
- Charting
- Scene Performance
- Markups In Compare Viewers Self Test
- Cardiac Agatston Measures
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Neurosurgical Planning Tutorial Markups Self Test
- Colors Scalar Bar Self Test
- Markups In Views Self Test
- Subject Hierarchy Core Plugins Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- Slicer4Minute
- label Toggle Bug2049
Unspecified
- BRAINSDWICleanup
Utilities
- Thingiverse Browser
- BRAINSStrip Rotation
- EMSegment Transform To New Format
- Data Store
BRAINS
- BRAINSTransform Convert
Vascular Modeling Toolkit
Wizards
Work in Progress
Converters
Informatics
TestCases
- Reporting Self Test
- Label To DICOMSEGConverter Self Test
XNATSlicer
Modules by contributing organization
71 contributing organizations:
- Asclepios INRIA
- AZE R&D
- Boston Children's Hospital
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, pieper@isomics.com
- Kingston General Hospital
- Kitware
- Kitware)
- MGH
- MGH, Boston
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MSC/NLM
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- PMH, Toronto
- Princess Margaret Cancer Centre
- Queen's
- Queen's Universit
- Queen's University
- Queen's University) Jaime Garcia-Guevara (Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- RMP, PMH
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science in Japan
- Shiga University of Medical Science, Japan, SPL
- SINAPSE
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- SUMS
- Surgical Planning Lab
- UAB
- UHN, Toronto
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University 'Magna Graecia' of Catanzaro
- University College Cork
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
- JRC2013Vis
Boston Children's Hospital
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Brigham and Women's Hospital
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Surface Toolbox (scripted, built-in)
- test tractography display
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Colors Scalar Bar Self Test
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOMRWVMPlugin
- Fiducial Layout Switch Bug1914
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
BWH, SPL
- Crop Volume (loadable, built-in)
BWH, SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
BWH/UAB
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
CARMA
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- Gyro Guide (scripted, bundled in Gyro Guide extension)
CRTC
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
gatech
- Robust Statistics Segmenter (cli, built-in)
GE
- Add Scalar Volumes (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- DWIConvert (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Resample Scalar Volume (cli, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter (cli, built-in)
Georgia Tech
- Carrera Slice (loadable, bundled in Carrera Slice extension)
IBM
- Annotations (loadable, built-in)
Isomics
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Models (loadable, built-in)
- Performance Tests
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Tractography Interactive Seeding (loadable, built-in)
- Transforms (loadable, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, pieper@isomics.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Kingston General Hospital
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Kitware
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Port Placement (scripted, bundled in Port Placement extension)
- Reformat (loadable, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
Kitware)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
MGH
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Plm Register (scripted, bundled in Slicer RT extension)
MGH, Boston
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
Moka Creative, LLC, kumar.sunil.p@gmail.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
MSC/NLM
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
Noware
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
Orobix
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
PerkLab at Queen's University
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
PerkLab, Queen's
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
PerkLab, Queen's University
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
PMH
- Colors Scalar Bar Self Test
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
PMH, Toronto
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
Princess Margaret Cancer Centre
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
Queen's
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Rt Import Self Test
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- NAMIC Tutorial 2013June Self Test
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
Queen's Universit
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
Queen's University
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Queen's University) Jaime Garcia-Guevara (Queen's University
- Breach Warning Self Test
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
RMP, PMH
- Dicom Sro Import Plugin
SAIC-Frederick, NCI-Frederick
- Volume Rendering (loadable, built-in)
SBU
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
SCI Institute
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Shiga University of Medical Science in Japan
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Shiga University of Medical Science, Japan, SPL
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
SINAPSE
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
SNR
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL
- DICOM2Full Brain Tractography (scripted, built-in)
- Label To DICOMSEGConverter Self Test
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting Self Test
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL B&W Harvard
SPL, BWH
- ACPCTransform (cli, built-in)
- Annotations (loadable, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Fiducial Registration (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Image Label Combine (cli, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Probe Volume With Model (cli, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Robust Statistics Segmenter (cli, built-in)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
SPL, BWH, UPenn
- Merge Models (cli, built-in)
SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Surgical Planning Lab
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
UAB
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
UHN, Toronto
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Uiowa
- DWIConvert (cli, built-in)
UIowa
- DWIConvert (cli, built-in)
UNC
- DWIRician LMMSEFilter (cli, built-in)
- Extract Skeleton (cli, built-in)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Univ of Michigan
- Surface Registration (scripted, bundled in CMFreg extension)
Univ. of Iowa
University 'Magna Graecia' of Catanzaro
- Plastimatch Py (loadable, bundled in Slicer RT extension)
University College Cork
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
University of Heidelberg
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
University of Iowa
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
University of Iowa) and Andrey Fedorov (SPL
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
UPenn
- Annotations (loadable, built-in)
- EMSegment (loadable, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Scene Views (loadable, built-in)
Utah
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
UVa
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
UWA
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
WashU-St. Louis, dmarcus@wustl.edu
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
while at GE
- Pk Modeling (cli, bundled in Pk Modeling extension)
Modules by contributing individual
185 contributing individuals:
- /
- a
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmakovich (Isomics)
- Alex Yarmarkovich (Kitware))
- Ali Ghayoor
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Amelie Meyer (PerkLab, Queen's University)
- Analysis Laboratory
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andreas Freudling (SPL, BWH)
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Kot (CRTC)
- Anonymous
- Antonio Damato
- Antonio Tristan Vega (UVa)
- Anuja Sharma
- Arie Nakhmani (UAB)
- Atsushi Yamada (SNR)
- Beatriz Paniagua from Department of Orthodontics (UNC)
- Benjamin Long (Kitware)
- Benjamin Yvernault
- Bill Lorensen (Noware)
- Brad Davis
- Bradley Lowekamp (MSC/NLM)
- Brian Zenger (CARMA)
- BWH
- c
- Carl-Fredrik Westin
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
- Casey B Goodlett (Kitware)
- Charles Marion (Kitware)
- Christian Baumgartner
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Blezek (GE)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wassermann (Brigham and Women's Hospital)
- Dinggang Shen (UNC)
- Dirk Padfield (GE)
- Dominik Meier (SPL, BWH)
- e
- er (Kingston General Hospital)
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- ez (UVa)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Harris
- Greg Sharp (MGH, Boston)
- Gregory Sharp (MGH)
- Guido Gerig (UNC)
- Guillaume Pernelle
- Hans J. Johnson
- Hans Johnson (SINAPSE)
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- i
- Ipek Oguz
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Baptiste Berger (Kitware)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jim Miller (GE)
- Johan Andruejol (Kitware)
- John Evans (MGH)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Joy Matsui (UIowa)
- Julien Finet (Kitware)
- Julien Jomier (Kitware)
- Junichi Tokuda (BWH)
- K
- Kent Williams (UIowa)
- Kent WIlliams
- Kevin Alex (Kingston General Hospital)
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Kyle Sunderl (Queen's University)
- l
- Lauren Barber
- Lauren O'Donnell (SPL, BWH)
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- m
- Marc Niethammer (UNC)
- Marcel Prastawa prastawa@sci.utah.edu
- Mark Scully (Uiowa)
- Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
- Martin Styner (UNC)
- Mason Winsauer
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Matthew Woehlke (Kitware)
- Michael Jeulin-Lagarrigue (Kitware)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Neuro Image Resarch
- Nicholas Herlambang (AZE R&D)
- Nick Tustison (UPenn)
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- p
- Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
- Pat Marion (Kitware)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pierre Seroul (UNC)
- Pietro Nardelli (University College Cork)
- Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- Polina Goll
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- R
- r
- Raul San Jose (SPL, BWH)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ross Whitaker (Utah)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- Salma Bengali (CARMA)
- Sam Song
- Santiago Aja Fern (UVa)
- Sebastien Barré (Kitware)
- Sebastien Barre
- Shigeyuki Naka (SUMS)
- Soichiro Tani (BWH, SUMS)
- Sonia Pujol (SPL, BWH)
- Stefan Lienhard
- Stephen Aylward (Kitware)
- Stephen R Aylward (Kitware)
- Steve Pieper (SPL)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Sylvain Gouttard
- t
- Tamas Ungi (PerkLab, Queen's University)
- the University of North Carolina at Chapel Hill (UNC)
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani (SUMS)
- UNC Medical School
- Uof M School Of Dentistry
- Uof M School of Dentistry
- Vince Magnotta (UIowa)
- Vincent A. Magnotta
- Vincent Magnotta
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- Wendy Plesniak (SPL, BWH)
- Xiaodong Tao (GE)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- y Wells
- Yanling Liu (SAIC-Frederick, NCI-Frederick)
- Yi Gao (BWH/UAB)
- Yinglin Lee (SPL, BWH)
- Yingxuan Zhu (GE)
- Yinpeng Li
- Yixun Liu (CRTC)
- Yogesh Rathi (yogesh@bwh.harvard.edu)
- Yong Zhang (IBM)
- Yumin Yuan
- Yundi Shi
/
- Dicom Rt Import Plugin
a
- Dicom Rt Import Plugin
Akila Viswanathan
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Alan Morris
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Alex Yarmakovich
- Models (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
Alex Yarmarkovich
- Data (loadable, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Image Label Combine (cli, built-in)
- Transforms (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Ali Ghayoor
- BRAINSTransform Convert (cli, built-in)
- Perform Metric Test (cli, built-in)
Alireza Mehrtash
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
Allen Tannenbaum
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Amelie Meyer
- Plus Remote (scripted, bundled in Slicer IGT extension)
Analysis Laboratory
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Andinet Enquobahrie
- Port Placement (scripted, bundled in Port Placement extension)
Andras Lasso
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
Andreas Freudling
- Volume Rendering (loadable, built-in)
Andrey Fedorov
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BSpline To Deformation Field (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Change Tracker Self Test
- Crop Volume (loadable, built-in)
- DICOMRWVMPlugin
- DICOMSegmentation Plugin
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Label To DICOMSEGConverter Self Test
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Multi Volume Importer Plugin
- N4ITKBias Field Correction (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting (loadable, bundled in Reporting extension)
- Reporting Self Test
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
Andriy Kot
Anonymous
- CLIROITest (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
Antonio Damato
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Anuja Sharma
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Arie Nakhmani
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Atsushi Yamada
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
Beatriz Paniagua from Department of Orthodontics
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Benjamin Long
- Sample Data (scripted, built-in)
Benjamin Yvernault
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
Bill Lorensen
- Add Scalar Volumes (cli, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Voting Binary Hole Filling Image Filter (cli, built-in)
Brad Davis
- EMSegment Command Line (cli, built-in)
Bradley Lowekamp
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
Brian Zenger
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
BWH
- DICOMSegmentation Plugin
- Multi Volume Importer Plugin
c
- Dicom Rt Import Plugin
Carl-Fredrik Westin
- UKFTractography (cli, bundled in UKFTractography extension)
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Casey B Goodlett
- Expert Automated Registration (cli, built-in)
- Fiducial Registration (cli, built-in)
Charles Marion
- Data Store (loadable, built-in)
Christian Baumgartner
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Csaba Pinter
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Rt Import Self Test
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- NAMIC Tutorial 2013June Self Test
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
Dan Marcus
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Daniel Blezek
- Execution Model Tour (cli, built-in)
Daniel Haehn
- Annotations (loadable, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Merge Models (cli, built-in)
- Scene Views (loadable, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Danny Perry
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Demian Wassermann
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- test tractography display
- Tractography Label Map Seeding (cli, built-in)
Dinggang Shen
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Dirk Padfield
- Label Map Smoothing (cli, built-in)
Dominik Meier
- Fiducial Registration (cli, built-in)
e
- Dicom Rt Import Plugin
er
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Ethan Ulrich
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Eugene Kholmovski
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
ez
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Fotis Drakopoulos
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Francois Budin
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Franklin King
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transforms (loadable, built-in)
Greg Gardner
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Greg Harris
- BRAINSDemon Warp (cli, built-in)
- BRAINSResample (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Greg Sharp
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
Gregory Sharp
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
Guido Gerig
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
Guillaume Pernelle
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Hans J. Johnson
- BRAINSDemon Warp (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Hans Johnson
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- DWIConvert (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- UKFTractography (cli, bundled in UKFTractography extension)
hans-johnson -at- uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
http://www.psychiatry.uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
i
- Dicom Rt Import Plugin
Ipek Oguz
- Convert VTK (cli, bundled in UKFTractography extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Ivan Kolesov
- Carrera Slice (loadable, bundled in Carrera Slice extension)
Jan Egger
Jayender Jagadeesan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Jean-Baptiste Berger
- Data Store (loadable, built-in)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Sample Data (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Transforms (loadable, built-in)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Jennifer Andrea
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
Jessica Forbes
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
Jim Miller
- Charting (scripted, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
- Units (loadable, built-in)
John Evans
- Pk Modeling (cli, bundled in Pk Modeling extension)
Jonathan Bronson
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Josh Cates
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Joy Matsui
- DWIConvert (cli, built-in)
Julien Finet
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Image Maker (cli, bundled in Image Maker extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Scene Performance (scripted, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Julien Jomier
- Gaussian Blur Image Filter (cli, built-in)
Junichi Tokuda
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
K
- Dicom Rt Import Plugin
Kent Williams
- BRAINSDWICleanup (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Convert VTK (cli, bundled in UKFTractography extension)
- DWIConvert (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
Kent WIlliams
- BRAINSStrip Rotation (cli, built-in)
Kevin Alex
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Kevin Wang
- Colors Scalar Bar Self Test
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Import Plugin
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Kilian Pohl
- Annotations (loadable, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Scene Views (loadable, built-in)
Koichiro Murakami
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Kyle Sunderl
- Dvh Comparison (scripted, bundled in Slicer RT extension)
l
- Dicom Rt Import Plugin
Lauren Barber
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Lauren O'Donnell
- Fiber Bundle Label Select (cli, built-in)
- Probe Volume With Model (cli, built-in)
Laurent Chauvin
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Liang-Jia Zhu
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Liangjia Zhu
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Luca Antiga
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Luis G. Torres
- Port Placement (scripted, bundled in Port Placement extension)
Luping Fang
- Gyro Guide (scripted, bundled in Gyro Guide extension)
m
- Dicom Rt Import Plugin
Marc Niethammer
- DWIRician LMMSEFilter (cli, built-in)
Marcel Prastawa prastawa@sci.utah.edu
Mark Scully
- DWIConvert (cli, built-in)
Markus Van Tol
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Martin Styner
- Convert VTK (cli, bundled in UKFTractography extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
Mason Winsauer
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Matt Lougheed
- Resection Volume (scripted, bundled in Resection Planner extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
Mattea Welch
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Matthew Holden
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Matthew S. Holden
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Matthew Woehlke
- Extension Wizard (scripted, built-in)
Michael Jeulin-Lagarrigue
- Reformat (loadable, built-in)
Minjeong Kim
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Nabgha Fahrat
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Neuro Image Resarch
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Nicholas Herlambang
- JRC2013Vis
Nick Tustison
- N4ITKBias Field Correction (cli, built-in)
Nicole Aucoin
- ACPCTransform (cli, built-in)
- Add Many Markups Fiducial Test
- Annotations (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Colors Scalar Bar Self Test
- Data (loadable, built-in)
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker (cli, built-in)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
Nigel Goh
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
Nikos Chrisochoides
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Olivier Clatz
p
- Dicom Rt Import Plugin
Paolo Zaffino
- Plastimatch Py (loadable, bundled in Slicer RT extension)
Pat Marion
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Paul Mercea
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
Pengdong Xiao
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Peter Black
- Change Tracker (scripted, bundled in Change Tracker extension)
Peter Karasev
- Carrera Slice (loadable, bundled in Carrera Slice extension)
Peter Savadjiev
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Pierre Seroul
- Extract Skeleton (cli, built-in)
Pietro Nardelli
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
Polina Goll
- EMSegment Command Line (cli, built-in)
Qing Pan
- Gyro Guide (scripted, bundled in Gyro Guide extension)
R
- Dicom Rt Import Plugin
r
- Dicom Rt Import Plugin
Raul San Jose
- Diffusion Tensor Scalar Measurements (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
Rob MacLeod
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Ron Kikinis
- ACPCTransform (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Crop Volume (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Robust Statistics Segmenter (cli, built-in)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
Ross Whitaker
- Label Map Smoothing (cli, built-in)
Ruifeng Chen
- Gyro Guide (scripted, bundled in Gyro Guide extension)
S
- Dicom Rt Import Plugin
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Salma Bengali
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Sam Song
Santiago Aja Fern
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Sebastien Barré
- Cameras (loadable, built-in)
Sebastien Barre
- EMSegment Command Line (cli, built-in)
Shigeyuki Naka
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Soichiro Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Sonia Pujol
- Dice Computation (loadable, bundled in Dice Computation extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
Stefan Lienhard
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Stephen Aylward
- Extract Skeleton (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
Stephen R Aylward
- Expert Automated Registration (cli, built-in)
Steve Pieper
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Performance Tests
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Threading Test
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volumes (loadable, built-in)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sunil Kumar
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sylvain Bouix
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Sylvain Gouttard
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
t
- Dicom Rt Import Plugin
Tamas Ungi
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Breach Warning Self Test
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
the University of North Carolina at Chapel Hill
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Tina Kapur
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Tobias Penzkofer
Tohru Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
UNC Medical School
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
UofM School Of Dentistry
UofM School of Dentistry
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Vince Magnotta
- DWIConvert (cli, built-in)
Vincent A. Magnotta
- BRAINSLabel Stats (cli, built-in)
Vincent Magnotta
- BRAINSResample (cli, built-in)
Vinicius Boen
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
Vivek Narayan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
Wendy Plesniak
- Annotations (loadable, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Xiaodong Tao
- DWIConvert (cli, built-in)
- Model To Label Map (cli, built-in)
Xiaofeng Liu
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Xiaojun Chen
y Wells
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Yanling Liu
- Volume Rendering (loadable, built-in)
Yi Gao
- i Gyne (scripted, bundled in i Gyne extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Yinglin Lee
- Test Grid Transform Registration (cli, built-in)
Yingxuan Zhu
- Pk Modeling (cli, bundled in Pk Modeling extension)
Yinpeng Li
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Yixun Liu
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Yogesh Rathi
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Yong Zhang
- Annotations (loadable, built-in)
Yumin Yuan
- EMSegment Command Line (cli, built-in)
Yundi Shi
- Convert VTK (cli, bundled in UKFTractography extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Modules by type
3 types:
cli
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Apply Matrix (cli, bundled in CMFreg extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CLIROITest (cli, built-in)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- Convert VTK (cli, bundled in UKFTractography extension)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Downsize (cli, bundled in CMFreg extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiducial Registration (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- Image Label Combine (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Non Growing (cli, bundled in CMFreg extension)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Probe Volume With Model (cli, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Simple Region Growing Segmentation (cli, built-in)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
- VBRAINSDemon Warp (cli, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
loadable
- Annotations (loadable, built-in)
- Beams (loadable, bundled in Slicer RT extension)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Cameras (loadable, built-in)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Double Arrays (loadable, built-in)
- EMSegment (loadable, built-in)
- EMSegment Quick (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Subject Hierarchy (loadable, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
scripted
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Charting (scripted, built-in)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Endoscopy (scripted, built-in)
- Extension Wizard (scripted, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- i Gyne (scripted, bundled in i Gyne extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Multi Volume Importer (scripted, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Performance (scripted, built-in)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Simple Filters (scripted, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by extension
55 extensions:
- ABC
- Airway Segmentation
- builtin
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Fiber Analyzer
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Mesh To Label Map
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Segmentation Aided Registration
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
ABC
AirwaySegmentation
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
builtin
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Annotations (loadable, built-in)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cameras (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- CLIROITest (cli, built-in)
- Colors (loadable, built-in)
- Create DICOMSeries (cli, built-in)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Double Arrays (loadable, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Image Label Combine (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Markups (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Open IGTLink IF (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- Probe Volume With Model (cli, built-in)
- Reformat (loadable, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Scene Views (loadable, built-in)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Toolbox (scripted, built-in)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
Cardiac_MRI_Toolkit
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
CardiacAgastonMeasures
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
CarreraSlice
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- KUtil (scripted, bundled in Carrera Slice extension)
CBC_3D_I2MConversion
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
ChangeTracker
- Change Tracker (scripted, bundled in Change Tracker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
CleaverExtension
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
CMFreg
- Apply Matrix (cli, bundled in CMFreg extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
CornerAnnotation
- Corner Annotation (scripted, bundled in Corner Annotation extension)
CurveMaker
- Curve Maker (scripted, bundled in Curve Maker extension)
DiceComputation
- Dice Computation (loadable, bundled in Dice Computation extension)
DTIAtlasFiberAnalyzer
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
ErodeDilateLabel
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
FastGrowCutEffect
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
FinslerTractography
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
GelDosimetryAnalysis
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
GyroGuide
- Gyro Guide (scripted, bundled in Gyro Guide extension)
IASEM
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
iGyne
ImageMaker
- Image Maker (cli, bundled in Image Maker extension)
IntensitySegmenter
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
LAScarSegmenter
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LongitudinalPETCT
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
MABMIS
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
MatlabBridge
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
MeshToLabelMap
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
MultidimData
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
NeedleFinder
- Needle Finder (scripted, bundled in Needle Finder extension)
OpenCAD
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
PBNRR
PercutaneousApproachAnalysis
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
PerkTutor
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
PETDICOMExtension
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
PkModeling
- Pk Modeling (cli, bundled in Pk Modeling extension)
PortPlacement
- Port Placement (scripted, bundled in Port Placement extension)
PyDevRemoteDebug
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
Reporting
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Reporting (loadable, bundled in Reporting extension)
ResectionPlanner
- Resection Volume (scripted, bundled in Resection Planner extension)
Scoliosis
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
SegmentationAidedRegistration
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
SlicerExtension-VMTK
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
SlicerIGT
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
SlicerRT
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
SlicerToKiwiExporter
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
SobolevSegmenter
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
SwissSkullStripper
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
TCIABrowser
- TCIABrowser (scripted, bundled in TCIABrowser extension)
ThingiverseBrowser
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
TrackerStabilizer
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
UKFTractography
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
VolumeClip
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
WindowLevelEffect
- Window Level Effect (scripted, bundled in Window Level Effect extension)
XNATSlicer
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Extensions by name
54 extensions:
- ABC
- Airway Segmentation
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Fiber Analyzer
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Mesh To Label Map
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Segmentation Aided Registration
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by category
25 categories:
- Cardiac
- Cardiac MRI toolkit
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Exporter
- Filtering
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Multidimensional data
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Shape Analysis
- Tractography
- Training
- Utilities
- Vascular Modeling Toolkit
- Wizards
Cardiac
Cardiac MRI toolkit
Converters
Developer Tools
Diffusion
Editor Effects
Exporter
Filtering
Morphology
IGT
- Port Placement
- Gyro Guide
- Corner Annotation
- Percutaneous Approach Analysis
- Needle Finder
- Slicer IGT
- Tracker Stabilizer
- i Gyne
- Resection Planner
Informatics
Mesh Generation
Microscopy
Multidimensional data
Quantification
Radiotherapy
Registration
Remote
Scoliosis
Segmentation
- Airway Segmentation
- Open CAD
- Swiss Skull Stripper
- Carrera Slice
- LAScar Segmenter
- Intensity Segmenter
- MABMIS
- ABC
- Sobolev Segmenter
- Fast Grow Cut Effect
- Volume Clip
Shape Analysis
Tractography
Training
Utilities
Vascular Modeling Toolkit
Wizards
Extensions by contributing organization
54 contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Boston Childrens Hospital
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- GE
- GE GLobal Research
- GT
- Isomics
- Kitware
- Massachusetts General Hospital
- Moka Creative LLC, Washington University in St. Louis
- NIRAL, UNC
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UIowa
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- University of Utah
- Utah
- UWA
- Washington University in St. Louis
- yogesh@bwh.harvard.edu
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Boston Childrens Hospital
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Open CAD
- Pk Modeling
- Segmentation Aided Registration
- Tracker Stabilizer
BWH & MGH
BWH, SPL
BWH/UAB
CARMA
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
GE
GE GLobal Research
GT
Isomics
Kitware
Massachusetts General Hospital
Moka Creative LLC, Washington University in St. Louis
NIRAL, UNC
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SPL
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
UIowa
UNC
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
University of Utah
Utah
UWA
Washington University in St. Louis
yogesh@bwh.harvard.edu
Extensions by contributing individual
125 contributing individuals:
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmarkovich (Kitware))
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andre Mastmeyer
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Fedorov (BWH)
- Andriy Kot (CRTC)
- Antonio Damato
- Antonio Tristan-Vega (Isomics)
- Arie Nakhmani (UAB)
- Arnaud Gelas (Crisalix)
- Atsushi Yamada (SNR)
- Beatriz Paniagua (UNC)
- Bill Lorensen (Noware)
- Bradley Lowekamp (MSC/NLM)
- Brig Bagley (SCI Institute)
- Carl-Fredrik Westin
- Christian Baumgartner
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wasssermann
- Dinggang Shen (UNC)
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Sharp (MGH, Boston)
- Guillaume Pernelle
- Hans Johnson (SINAPSE)
- Ipek Oguz
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jiashu Zhang (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- Jim Miller (GE)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Julien Finet (Kitware)
- Junichi Tokuda (BWH)
- Karl Fritscher (BWH & MGH)
- Kent Williams (UIowa)
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Lauren Barber
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Mahnaz Maddah (SRI)
- Manson Winsauer (UNC)
- Marcel Prastawa (University of Utah)
- Martin Styner (UNC)
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Mauricio Reyes (University of Bern)
- Ming-ching Chang (GE)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- Pat Marion (Kitware)
- Patricio Vela (GT)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pietro Nardelli (University College Cork)
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Rick Herrick (Washington University in St. Louis)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Ryan Eckbo
- S
- Salma Bengali (CARMA)
- Sam Song
- Stefan Bauer (University of Bern)
- Stefan Lienhard
- Steve Pieper (SPL)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Tamas Ungi (PerkLab, Queen's University)
- Thomas Fejes (University of Bern)
- Tina Kapur
- Tobias Penzkofer
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- Xiaolei Chen (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- y Wells
- Yi Gao (BWH/UAB)
- Yingxuan Zhu (GE)
- Yinpeng Li
- Yixun Liu (CRTC)
- Yogesh Rathi (yogesh@bwh.harvard.edu)
- Yundi Shi
Akila Viswanathan
Alan Morris
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
Andinet Enquobahrie
Andras Lasso
Andre Mastmeyer
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PETDICOMExtension
- Reporting
- TCIABrowser
- Window Level Effect
Andriy Fedorov
Andriy Kot
Antonio Damato
Antonio Tristan-Vega
Arie Nakhmani
Arnaud Gelas
Atsushi Yamada
Beatriz Paniagua
Bill Lorensen
Bradley Lowekamp
Brig Bagley
Carl-Fredrik Westin
Christian Baumgartner
Csaba Pinter
Dan Marcus
Daniel Haehn
Danny Perry
Demian Wasssermann
Dinggang Shen
Ethan Ulrich
Eugene Kholmovski
Fotis Drakopoulos
Francois Budin
Franklin King
Greg Gardner
Greg Sharp
Guillaume Pernelle
Hans Johnson
Ipek Oguz
Ivan Kolesov
Jan Egger
Jayender Jagadeesan
Jean-Christophe Fillion-Robin
Jennifer Andrea
Jessica Forbes
Jiashu Zhang
Jim Miller
Jonathan Bronson
Josh Cates
Julien Finet
Junichi Tokuda
Karl Fritscher
Kent Williams
Kevin Wang
Kilian Pohl
Koichiro Murakami
Lauren Barber
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luca Antiga
Luis G. Torres
Luping Fang
Mahnaz Maddah
Manson Winsauer
Marcel Prastawa
Martin Styner
Matt Lougheed
Mattea Welch
Matthew Holden
Matthew S. Holden
Mauricio Reyes
Ming-ching Chang
Minjeong Kim
Nabgha Fahrat
Nicole Aucoin
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Patricio Vela
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Peter Savadjiev
Pietro Nardelli
Qing Pan
Rick Herrick
Rob MacLeod
Ron Kikinis
Ruifeng Chen
Ryan Eckbo
S
Salma Bengali
Sam Song
Stefan Bauer
Stefan Lienhard
Steve Pieper
Sunil Kumar
Sylvain Bouix
Tamas Ungi
Thomas Fejes
Tina Kapur
Tobias Penzkofer
Vinicius Boen
Vivek Narayan
Xiaofeng Liu
Xiaojun Chen
Xiaolei Chen
y Wells
Yi Gao
- Carrera Slice
- Fast Grow Cut Effect
- i Gyne
- LAScar Segmenter
- Needle Finder
- Segmentation Aided Registration
