Documentation/Nightly/Modules/LongitudinalQuantification

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Introduction and Acknowledgements

Author: Jean-Baptiste Vimort, University of Michigan
Contributors: Lucia Cevidanes (University of Michigan), Beatriz Paniagua (University of North Carolina), Juan-Carlos Prieto (University of North Carolina)
Contact: Jean-Baptiste Vimort, <email>jb.vimort@gmail.com</email>
Acknowledgments: This work was supported by the National Institues of Dental and Craniofacial Research and Biomedical Imaging and Bioengineering of the National Institutes of Health under Award Number R01DE024450

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Module Description

The goal of this module is to simplify the user interface of slicer and more particularly for people who want to quantify differences between two models or make measurement on one model.
The Slicer's modules useful for quantification are all quickly accessible from LongitudinalQuantification, they are organized in three different tabs: Preprocessing, Quantification and Analysis.

Use Cases

Logo for LongitudinalQuantification

Interface of LongitudinalQuantification

Tutorials

Scene

This tab offer the possibility to modify how the models and the landmarks lists are displayed in the 3D view of Slicer. The user has the possibility ti hide/show them, modify their color and their opacity.

Input Data

In this tab, the user will have to choose if he wants to make measurements between two models or on one single model. If the user choose to work with two models, a group box will appear where he will be able to switch between the two models.

Computation

Those three tabs will allow the user to switch between the different modules. The preprocessing tab contains EasyClip and SurfaceRegistration. The quantification tab contains AnglePlanes, ModelToModelDistance and Q3DC. The analysis tab contains MeshStatistics, PickAndPaint and ShapePopulationViewer.

Related Extensions

CMFreg

ModelToModelDistance

ShapePopulationViewer