User:UpdateBot/Issue-2843-Consolidated-Extension-List/4.4

Where to start ? Training pages Information on how to use Slicer Issue-2843-Consolidated-Extension-List FAQ Set of common questions/answers Users mailing list / Sign-up / Browse archives How to Report a problem / Create a feature request   NEW Slicer Application [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/getting_started.html#installing-3d-slicer Installation / Uninstallation] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/user_interface.html Main Application User-Interface] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/settings.html Application Settings] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/modules/extensions_manager.html Extensions Manager] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/user_interface.html#mouse-keyboard-shortcuts Mouse Buttons, "Hot-keys" and Keyboard Shortcuts] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/getting_started.html#recommended-hardware-configuration Recommended Computer Configurations] [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/data_loading_and_saving.html Loading or saving data] and listing of [[[:Template:Documentation/Issue-2843-Consolidated-Extension-List/slicer-manual-base-url]]/user_guide/data_loading_and_saving.html#supported-data-formats supported data formats] Slicer Lookup Tables Setting up and using stereoscopic viewing QtTesting - Easy way to record and play macros		Module Categories Modules by name Modules by category Modules by contributing organization Modules by contributing individual Modules by type Modules by extension Extensions by name Extensions by category Extensions by contributing organization Extensions by contributing individual List of extensions known to be broken		Developers Corner Information for Software Developers Source code, contribute patch, develop modules Developers mailing list / Browse archives Intended for discussion of programming related questions Miscellaneous Documentation guidelines Slicer user documentation principle and guidelines Visual blog Set of screenshots showing Slicer in action. Release Notes Platform specific issues and considerations Announcements & Acknowledgments Slicer Registration Case Library Real-life example cases of using the Slicer registration tools, incl. datasets and step-by-step instructions to follow and try yourself. Documentación en Español   NEW Introducción a 3D Slicer en Español Breve descripción de proyecto y un breve viaje por sus principales herramientas y funcionalidades. Reconstrucciones volumétricas con 3D Slicer Guía de uso para la herramienta de creación de reconstrucciones volumétricas de 3D Slicer. Crear modelos/contornos de órganos con 3D Slicer Guía rápida introductoria para la creación de contornos de órganos para generar vistas volumétricas. Endoscopías virtuales con 3D Slicer Manual de uso de la herramienta para 3D Slicer desarrollada por Steve Pieper para realizar endoscopías virtuales. Creando curvas de isodosis con SlicerRT de 3D Slicer Introducción a la extensión SlicerRT para 3D Slicer enfocada en investigación en radioterapia.

• Modules by name
• Modules by category
• Modules by contributing organization
• Modules by contributing individual
• Modules by type
• Modules by extension
• Extensions by name
• Extensions by category
• Extensions by contributing organization
• Extensions by contributing individual

List of extensions known to be broken

Modules by name

215 modules:

• ABC (cli, bundled in ABC extension)
• ACPCTransform (cli, built-in)
• Add Scalar Volumes (cli, built-in)
• Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
• Annotations (loadable, built-in)
• Apply Matrix (cli, bundled in CMFreg extension)
• Beams (loadable, bundled in Slicer RT extension)
• Bin Shrink (cli, bundled in IASEM extension)
• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• BRAINSDemon Warp (cli, built-in)
• BRAINSDWICleanup (cli, built-in)
• BRAINSFit (cli, built-in)
• BRAINSLabel Stats (cli, built-in)
• BRAINSResample (cli, built-in)
• BRAINSResize (cli, built-in)
• BRAINSROIAuto (cli, built-in)
• BRAINSStrip Rotation (cli, built-in)
• BRAINSTransform Convert (cli, built-in)
• Breach Warning (loadable, bundled in Slicer IGT extension)
• Carrera Slice (loadable, bundled in Carrera Slice extension)
• Cast Scalar Volume (cli, built-in)
• Centerline Computation (scripted, bundled in VMTK extension)
• Change Tracker (scripted, bundled in Change Tracker extension)
• Checker Board Filter (cli, built-in)
• Cleaver CLI (cli, bundled in Cleaver Extension extension)
• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Colors (loadable, built-in)
• Compare Volumes (scripted, bundled in CMFreg extension)
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Convert VTK (cli, bundled in UKFTractography extension)
• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Create DICOMSeries (cli, built-in)
• Create Models (loadable, bundled in Slicer IGT extension)
• Crop Volume (loadable, built-in)
• Curvature Anisotropic Diffusion (cli, built-in)
• Curve Maker (scripted, bundled in Curve Maker extension)
• Data (loadable, built-in)
• Data Probe (scripted, built-in)
• Data Store (loadable, built-in)
• Dice Computation (loadable, bundled in Dice Computation extension)
• DICOM (scripted, built-in)
• DICOM2Full Brain Tractography (scripted, built-in)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Dicom Sro Import (loadable, bundled in Slicer RT extension)
• Diffusion Tensor Scalar Measurements (cli, built-in)
• Diffusion Weighted Volume Masking (cli, built-in)
• Dilate Label (cli, bundled in Erode Dilate Label extension)
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Downsize (cli, bundled in CMFreg extension)
• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Dvh Comparison (scripted, bundled in Slicer RT extension)
• DWIConvert (cli, built-in)
• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWITo DTIEstimation (cli, built-in)
• EMSegment (loadable, built-in)
• EMSegment Command Line (cli, built-in)
• EMSegment Quick (loadable, built-in)
• EMSegment Transform To New Format (cli, built-in)
• Endoscopy (scripted, built-in)
• Erode Label (cli, bundled in Erode Dilate Label extension)
• Extract Skeleton (cli, built-in)
• Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
• Fiber Bundle Label Select (cli, built-in)
• Fiber Bundle To Label Map (scripted, built-in)
• Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Fiducial Registration (cli, built-in)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)
• Gaussian Blur Image Filter (cli, built-in)
• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
• Gradient Anisotropic Diffusion (cli, built-in)
• Grayscale Fill Hole Image Filter (cli, built-in)
• Grayscale Grind Peak Image Filter (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Growing (cli, bundled in CMFreg extension)
• Gyro Guide (scripted, bundled in Gyro Guide extension)
• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• Histogram Matching (cli, built-in)
• IASEMImport (cli, bundled in IASEM extension)
• IASEMImport Series (cli, bundled in IASEM extension)
• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)
• i Gyne (scripted, bundled in i Gyne extension)
• Image Label Combine (cli, built-in)
• Intensity Difference Metric (cli, bundled in Change Tracker extension)
• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
• Isodose (loadable, bundled in Slicer RT extension)
• KUtil (scripted, bundled in Carrera Slice extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Label Map Smoothing (cli, built-in)
• Label Object Statistics (scripted, bundled in IASEM extension)
• Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
• Landmark Registration (scripted, bundled in CMFreg extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
• Markups (loadable, built-in)
• Mask Creation (cli, bundled in CMFreg extension)
• Mask Scalar Volume (cli, built-in)
• Median Image Filter (cli, built-in)
• Merge Models (cli, built-in)
• Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
• Metafile Importer (loadable, bundled in Multidim Data extension)
• Model Maker (cli, built-in)
• Models (loadable, built-in)
• Model To Label Map (cli, built-in)
• Multiply Scalar Volumes (cli, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• N4ITKBias Field Correction (cli, built-in)
• Needle Finder (scripted, bundled in Needle Finder extension)
• Non Growing (cli, bundled in CMFreg extension)
• Open IGTLink IF (loadable, built-in)
• Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
• Orient Scalar Volume (cli, built-in)
• Path Explorer (loadable, bundled in Slicer IGT extension)
• PBNRR (cli, bundled in PBNRR extension)
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
• Perform Metric Test (cli, built-in)
• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Planar Image (loadable, bundled in Slicer RT extension)
• plastimatch slicer bspline (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
• plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
• plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
• Plastimatch Py (loadable, bundled in Slicer RT extension)
• Plm Register (scripted, bundled in Slicer RT extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Port Placement (scripted, bundled in Port Placement extension)
• Probe Volume With Model (cli, built-in)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Reformat (loadable, built-in)
• Reporting (loadable, bundled in Reporting extension)
• Resample DTIVolume (cli, built-in)
• Resample Scalar Vector DWIVolume (cli, built-in)
• Resection Volume (scripted, bundled in Resection Planner extension)
• Robust Statistics Segmenter (cli, built-in)
• Sample Data (scripted, built-in)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
• Scene Views (loadable, built-in)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
• Segment CAD (scripted, bundled in Open CAD extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)
• Simple Filters (scripted, built-in)
• Simple Region Growing Segmentation (cli, built-in)
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
• Subject Hierarchy (loadable, built-in)
• Subtract Scalar Volumes (cli, built-in)
• Surface Registration (scripted, bundled in CMFreg extension)
• Surface Toolbox (scripted, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)
• Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
• Threshold Scalar Volume (cli, built-in)
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
• Tractography Display (loadable, built-in)
• Tractography Interactive Seeding (loadable, built-in)
• Tractography Label Map Seeding (cli, built-in)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Transforms (loadable, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)
• Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
• Units (loadable, built-in)
• VBRAINSDemon Warp (cli, built-in)
• Vector To Scalar Volume (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)
• Vff File Reader (loadable, bundled in Slicer RT extension)
• View Controllers (loadable, built-in)
• Volume Clip With Model (scripted, bundled in Volume Clip extension)
• Volume Clip With Roi (scripted, bundled in Volume Clip extension)
• Volume Rendering (loadable, built-in)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
• Volumes (loadable, built-in)
• Voting Binary Hole Filling Image Filter (cli, built-in)
• Welcome (loadable, built-in)
• Window Level Effect (scripted, bundled in Window Level Effect extension)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)
• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Modules by category

36 categories:

• BRAINS
  • Label Statistics
• Cardiac MRI Toolkit
• CMF Registration
  • Voxelbase Registration
• Converters
• Developer Tools
  • DICOM Plugins
  • Editor Extensions
  • Matlab
• Diffusion
  • Diffusion Data Conversion
  • Diffusion Tensor Images
  • Diffusion Weighted Images
  • Fiber Analysis
  • Tractography
• Editor Effects
• Endoscopy
• Examples
• Exporter
• File
• Filtering
  • Arithmetic
  • Denoising
  • Morphology
• IGT
• Informatics
• Legacy
  • Converters
  • Diffusion
    • Denoising
    • Diffusion Data Conversion
  • Filtering
  • Registration
  • Work in Progress
    • Diffusion Tensor
      • Test
• Mesh Generation
• Mesh Generation
• Microscopy
• Multidimensional data
• Multi Volume Support
• Perk Tutor
• Plastimatch
  • Registration
  • Utilities
• Quantification
  • Change Quantification
• Radiotherapy
• Registration
  • Specialized
• Segmentation
  • Specialized
• Shape Analysis
• Slicelets
• Surface Models
• Testing
  • IGT Tests
  • Slicer RT Tests
  • Test Cases
• Unspecified
• Utilities
  • BRAINS
• Vascular Modeling Toolkit
• Wizards
• Work in Progress
  • Converters
  • Informatics
    • Test Cases
• XNATSlicer

BRAINS

LabelStatistics

• BRAINSLabel Stats

Cardiac MRI Toolkit

• CMRToolkit Connected Threshold Filter
• CMRToolkit Isolated Connected Filter
• CMRToolkit Wizard
• CMRToolkit Inhomogeneity Correction
• CMRToolkit PVAntrum Cut
• CMRToolkit Axial Dilate
• Scar Visualization
• CMRToolkit Boolean REMOVEFilter
• LASegmentation Workflow
• CMRToolkit Automatic Left Atrial Scar
• CMRToolkit Registration
• CMRToolkit Registration BRAINSFit

CMF Registration

• Apply Matrix
• Landmark Registration
• Surface Registration
• Label Extraction
• Label Addition
• Downsize

Voxelbase Registration

• Mask Creation
• Non Growing
• Growing

Converters

• Vector To Scalar Volume
• Crop Volume
• Orient Scalar Volume
• Create DICOMSeries

Developer Tools

• Event Broker
• Execution Model Tour
• Double Arrays
• Py Dev Remote Debug
• Cameras
• Extension Wizard
• Image Maker

DICOM Plugins

• DICOMLongitudinal PETCTPlugin
• DICOMRWVMPlugin
• Multi Volume Importer Plugin
• DICOMPETSUVPlugin
• Dicom Rt Import Plugin
• DICOMDiffusion Volume Plugin
• DICOMSegmentation Plugin
• Dicom Sro Import Plugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin

Editor Extensions

• Binary Watershed Effect
• Double Threshold Effect

Matlab

• Matlab Commander
• Matlab Module Generator

Diffusion

• Tractography Display
• DICOM2Full Brain Tractography

Diffusion Data Conversion

• DWIConvert

Diffusion Tensor Images

• Resample DTIVolume
• Diffusion Tensor Scalar Measurements
• Tractography Label Map Seeding
• Tractography Interactive Seeding

Diffusion Weighted Images

• DWIRician LMMSEFilter
• Resample Scalar Vector DWIVolume
• DWIJoint Rician LMMSEFilter
• DWITo DTIEstimation
• Finsler Tractography
• Finsler Backtracing
• Diffusion Weighted Volume Masking

FiberAnalysis

• Fiber Compare
• DTIAtlas Fiber Analyzer
• Merge Stat With Fiber
• dtitractstat

Tractography

• Fiber Bundle To Label Map
• UKFTractography
• Fiber Bundle Label Select

Editor Effects

• Window Level Effect

Endoscopy

• Endoscopy

Examples

• Fast Grow Cut
• Fast Grow Cut Segmenter
• Segmentation Aided Registration
• Carrera Slice

Exporter

• Slicer To Kiwi Exporter

File

• Convert VTK

Filtering

• Extract Skeleton
• Threshold Scalar Volume
• N4ITKBias Field Correction
• Simple Filters
• Image Label Combine
• Voting Binary Hole Filling Image Filter
• Histogram Matching
• Checker Board Filter

Arithmetic

• Multiply Scalar Volumes
• Add Scalar Volumes
• Cast Scalar Volume
• Subtract Scalar Volumes
• Mask Scalar Volume

Denoising

• Gradient Anisotropic Diffusion
• Median Image Filter
• Gaussian Blur Image Filter
• Curvature Anisotropic Diffusion

Morphology

• Grayscale Fill Hole Image Filter
• Erode Label
• Dilate Label
• Grayscale Grind Peak Image Filter

IGT

• Resection Volume
• Volume Reslice Driver
• Collect Fiducials
• Percutaneous Approach Analysis
• Create Models
• Port Placement
• Open IGTLink IF
• Tracker Stabilizer
• Path Explorer
• Ultrasound Snapshots
• Transform Fusion
• Breach Warning
• Gyro Guide
• Fiducial Registration Wizard
• Open IGTLink Remote
• Plus Remote
• i Gyne
• Needle Finder
• Fiducials To Model Registration
• Pivot Calibration
• Corner Annotation

Informatics

• Annotations
• Markups
• Units
• DICOM
• Sample Data
• Subject Hierarchy
• Data
• Colors
• Curve Maker
• TCIABrowser

Legacy

Converters

• BSpline To Deformation Field

Diffusion

Denoising

• DWIUnbiased Non Local Means Filter

Diffusion Data Conversion

• DTIimport
• DTIexport

Filtering

• Otsu Threshold Image Filter
• Resample Scalar Volume

Registration

• Test Grid Transform Registration
• Expert Automated Registration

Work in Progress

Diffusion Tensor

Test

• Diffusion Tensor Test

Mesh Generation

• Cleaver CLI

MeshGeneration

• Body Centric Cubic Mesh
• Mesh Compression

Microscopy

• Bin Shrink
• Label Object Statistics
• Spacing Aware Curvature Diffusion
• IASEMImport
• IASEMImport Series

Multidimensional data

• Metafile Importer
• Sequence Browser
• Sequences

MultiVolume Support

• Multi Volume Explorer
• Multi Volume Importer

Perk Tutor

• Python Metrics Calculator
• Workflow Segmentation
• Transform Recorder
• Perk Evaluator

Plastimatch

• Dicom Sro Export
• Plm Register

Registration

• plastimatch slicer bspline
• plastimatch slicer landwarp
• plastimatch slicer xformwarp

Utilities

• plastimatch slicer dicomrt export
• plastimatch slicer dicomrt import
• Plastimatch Py

Quantification

• PETStandard Uptake Value Computation
• SUVFactor Calculator
• Spinal Curvature Measurement
• Pk Modeling
• Heterogeneity CAD
• PETSUVImage Maker
• Dice Computation
• Data Probe

ChangeQuantification

• Intensity Difference Metric

Radiotherapy

• Contour Comparison
• Dicom Rt Import
• Beams
• Dvh Comparison
• Isodose
• Contours
• Dose Accumulation
• Dicom Rt Export
• Dose Comparison
• Contour Morphology
• Planar Image
• Dicom Sro Import
• Dose Volume Histogram

Registration

• BRAINSResample
• Transforms
• BRAINSResize
• BRAINSFit
• PBNRR
• Perform Metric Test

Specialized

• ACPCTransform
• Fiducial Registration
• VBRAINSDemon Warp
• BRAINSDemon Warp
• Reformat

Segmentation

• IGR3D MABMIS Training
• ABC
• EMSegment Quick
• Simple Region Growing Segmentation
• Intensity Segmenter
• EMSegment
• Volume Clip With Roi
• Segment CAD
• Swiss Skull Stripper
• Airway Segmentation CLI
• LAScar Segmenter
• Sobolev Segmenter
• Volume Clip With Model
• IGR3D MABMIS Testing

Specialized

• EMSegment Command Line
• Robust Statistics Segmenter
• BRAINSROIAuto

Shape Analysis

• Mesh To Label Map

Slicelets

• Gel Dosimetry Analysis
• Gel Dosimetry Analysis Algo

Surface Models

• Surface Toolbox
• Model To Label Map
• Merge Models
• Probe Volume With Model
• Grayscale Model Maker
• Label Map Smoothing
• Model Maker

Testing

• Self Tests
• CLIROITest
• CLI4Test
• Threshold Threading Test
• Scoliosis Monitoring
• Performance Tests
• Slicer MRBTest

IGT Tests

• Breach Warning Self Test

SlicerRT Tests

• NAMIC Tutorial 2013June Self Test
• Dicom Rt Import Self Test

TestCases

• Slice Link Logic
• Atlas Tests
• RSNAQuant Tutorial
• Volume Rendering Scene Close
• test tractography display
• slicer Close Crash Bug2590
• Subject Hierarchy Generic Self Test
• View Controllers Slice Interpolation Bug1926
• Charting
• Scene Performance
• Markups In Compare Viewers Self Test
• Cardiac Agatston Measures
• fiber visibility crash2438
• scene Import2428
• RSNAVis Tutorial
• JRC2013Vis
• RSNA2012Prostate Demo
• Add Many Markups Fiducial Test
• Neurosurgical Planning Tutorial Markups Self Test
• Colors Scalar Bar Self Test
• Markups In Views Self Test
• Subject Hierarchy Core Plugins Self Test
• Change Tracker Self Test
• Fiducial Layout Switch Bug1914
• Slicer4Minute
• label Toggle Bug2049

Unspecified

• BRAINSDWICleanup

Utilities

• Thingiverse Browser
• BRAINSStrip Rotation
• EMSegment Transform To New Format
• Data Store

BRAINS

• BRAINSTransform Convert

Vascular Modeling Toolkit

• Vesselness Filtering
• Centerline Computation
• Level Set Segmentation

Wizards

• Compare Volumes
• Change Tracker

Work in Progress

• Longitudinal PETCT

Converters

• Label To DICOMSEGConverter

Informatics

• Reporting

TestCases

• Reporting Self Test
• Label To DICOMSEGConverter Self Test

XNATSlicer

• Xnat Slicer

Modules by contributing organization

71 contributing organizations:

• Asclepios INRIA
• AZE R&D
• Boston Children's Hospital
• Brigham and Women's Hospital
• BWH
• BWH, SPL
• BWH, SUMS
• BWH/UAB
• CARMA
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
• CRTC
• gatech
• GE
• Georgia Tech
• IBM
• Isomics
• Isomics Inc.
• Isomics, pieper@isomics.com
• Kingston General Hospital
• Kitware
• Kitware)
• MGH
• MGH, Boston
• Moka Creative, LLC, kumar.sunil.p@gmail.com
• MSC/NLM
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• PMH, Toronto
• Princess Margaret Cancer Centre
• Queen's
• Queen's Universit
• Queen's University
• Queen's University) Jaime Garcia-Guevara (Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• RMP, PMH
• SAIC-Frederick, NCI-Frederick
• SBU
• SCI Institute
• Shiga University of Medical Science in Japan
• Shiga University of Medical Science, Japan, SPL
• SINAPSE
• SNR
• SPL
• SPL B&W Harvard
• SPL, BWH
• SPL, BWH, UPenn
• SUMS
• Surgical Planning Lab
• UAB
• UHN, Toronto
• Uiowa
• UIowa
• UNC
• Univ of Michigan
• Univ. of Iowa
• University 'Magna Graecia' of Catanzaro
• University College Cork
• University of Heidelberg
• University of Iowa
• University of Iowa) and Andrey Fedorov (SPL
• UPenn
• Utah
• UVa
• UWA
• Wash U-St. Louis, dmarcus@wustl.edu
• while at GE

Asclepios INRIA

• PBNRR (cli, bundled in PBNRR extension)

AZE R&D

• JRC2013Vis

Boston Children's Hospital

• Centerline Computation (scripted, bundled in VMTK extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Vesselness Filtering (scripted, bundled in VMTK extension)

Brigham and Women's Hospital

• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Surface Toolbox (scripted, built-in)
• test tractography display
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)

BWH

• Add Many Markups Fiducial Test
• Change Tracker Self Test
• Colors Scalar Bar Self Test
• Curve Maker (scripted, bundled in Curve Maker extension)
• Dice Computation (loadable, bundled in Dice Computation extension)
• DICOMRWVMPlugin
• Fiducial Layout Switch Bug1914
• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• Markups (loadable, built-in)
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Neurosurgical Planning Tutorial Markups Self Test
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
• Segment CAD (scripted, bundled in Open CAD extension)
• Volume Rendering Scene Close (scripted, built-in)
• Window Level Effect (scripted, bundled in Window Level Effect extension)

BWH, SPL

• Crop Volume (loadable, built-in)

BWH, SUMS

• Corner Annotation (scripted, bundled in Corner Annotation extension)

BWH/UAB

• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

CARMA

• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide (scripted, bundled in Gyro Guide extension)

CRTC

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

gatech

• Robust Statistics Segmenter (cli, built-in)

GE

• Add Scalar Volumes (cli, built-in)
• Charting (scripted, built-in)
• Checker Board Filter (cli, built-in)
• Create DICOMSeries (cli, built-in)
• Curvature Anisotropic Diffusion (cli, built-in)
• Diffusion Tensor Test (cli, built-in)
• DWIConvert (cli, built-in)
• Execution Model Tour (cli, built-in)
• Gradient Anisotropic Diffusion (cli, built-in)
• Grayscale Fill Hole Image Filter (cli, built-in)
• Grayscale Grind Peak Image Filter (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Histogram Matching (cli, built-in)
• Label Map Smoothing (cli, built-in)
• Median Image Filter (cli, built-in)
• Model Maker (cli, built-in)
• Model To Label Map (cli, built-in)
• Multiply Scalar Volumes (cli, built-in)
• Orient Scalar Volume (cli, built-in)
• Otsu Threshold Image Filter (cli, built-in)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Resample Scalar Volume (cli, built-in)
• Simple Region Growing Segmentation (cli, built-in)
• Slice Link Logic (scripted, built-in)
• Slicer4Minute (scripted, built-in)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
• Subtract Scalar Volumes (cli, built-in)
• View Controllers (loadable, built-in)
• View Controllers Slice Interpolation Bug1926
• Voting Binary Hole Filling Image Filter (cli, built-in)

Georgia Tech

• Carrera Slice (loadable, bundled in Carrera Slice extension)

IBM

• Annotations (loadable, built-in)

Isomics

• Atlas Tests
• Binary Watershed Effect (scripted, bundled in IASEM extension)
• Centerline Computation (scripted, bundled in VMTK extension)
• Compare Volumes (scripted, bundled in CMFreg extension)
• Data (loadable, built-in)
• Data Probe (scripted, built-in)
• DICOM (scripted, built-in)
• Endoscopy (scripted, built-in)
• fiber visibility crash2438
• Fiber Bundle To Label Map (scripted, built-in)
• label Toggle Bug2049
• Landmark Registration (scripted, bundled in CMFreg extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Models (loadable, built-in)
• Performance Tests
• Reporting (loadable, bundled in Reporting extension)
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data (scripted, built-in)
• scene Import2428
• Self Tests
• Simple Filters (scripted, built-in)
• slicer Close Crash Bug2590
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Tractography Interactive Seeding (loadable, built-in)
• Transforms (loadable, built-in)
• Vector To Scalar Volume (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volumes (loadable, built-in)

Isomics Inc.

• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Slicer MRBTest
• Threshold Threading Test

Isomics, pieper@isomics.com

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Kingston General Hospital

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Kitware

• Cameras (loadable, built-in)
• Colors (loadable, built-in)
• Data (loadable, built-in)
• Data Store (loadable, built-in)
• Double Arrays (loadable, built-in)
• Event Broker
• Expert Automated Registration (cli, built-in)
• Extension Wizard (scripted, built-in)
• Extract Skeleton (cli, built-in)
• Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
• fiber visibility crash2438
• Fiducial Registration (cli, built-in)
• Gaussian Blur Image Filter (cli, built-in)
• Image Maker (cli, bundled in Image Maker extension)
• label Toggle Bug2049
• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Models (loadable, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• Port Placement (scripted, bundled in Port Placement extension)
• Reformat (loadable, built-in)
• Sample Data (scripted, built-in)
• Scene Performance (scripted, built-in)
• Simple Filters (scripted, built-in)
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Threshold Scalar Volume (cli, built-in)
• Tractography Display (loadable, built-in)
• Transforms (loadable, built-in)
• Units (loadable, built-in)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volumes (loadable, built-in)
• Welcome (loadable, built-in)

Kitware)

• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)

MGH

• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Plm Register (scripted, bundled in Slicer RT extension)

MGH, Boston

• Dicom Rt Export (loadable, bundled in Slicer RT extension)

Moka Creative, LLC, kumar.sunil.p@gmail.com

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

MSC/NLM

• Label Object Statistics (scripted, bundled in IASEM extension)
• Simple Filters (scripted, built-in)

Noware

• Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)

Orobix

• Centerline Computation (scripted, bundled in VMTK extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Surface Toolbox (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)

PerkLab at Queen's University

• Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)

PerkLab, Queen's

• Metafile Importer (loadable, bundled in Multidim Data extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)
• Transforms (loadable, built-in)

PerkLab, Queen's University

• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Volume Clip With Model (scripted, bundled in Volume Clip extension)

PMH

• Colors Scalar Bar Self Test
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)

PMH, Toronto

• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Isodose (loadable, bundled in Slicer RT extension)

Princess Margaret Cancer Centre

• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Dicom Sro Import (loadable, bundled in Slicer RT extension)

Queen's

• Beams (loadable, bundled in Slicer RT extension)
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Data (loadable, built-in)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Rt Import Self Test
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
• Isodose (loadable, bundled in Slicer RT extension)
• NAMIC Tutorial 2013June Self Test
• Planar Image (loadable, bundled in Slicer RT extension)
• Subject Hierarchy (loadable, built-in)
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test
• Vff File Reader (loadable, bundled in Slicer RT extension)

Queen's Universit

• Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)

Queen's University

• Breach Warning (loadable, bundled in Slicer IGT extension)
• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Create Models (loadable, bundled in Slicer IGT extension)
• Dvh Comparison (scripted, bundled in Slicer RT extension)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Resection Volume (scripted, bundled in Resection Planner extension)
• Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
• Volume Clip With Roi (scripted, bundled in Volume Clip extension)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)

Queen's University) Jaime Garcia-Guevara (Queen's University

• Breach Warning Self Test

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)

RMP, PMH

• Dicom Sro Import Plugin

SAIC-Frederick, NCI-Frederick

• Volume Rendering (loadable, built-in)

SBU

• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)

SCI Institute

• Cleaver CLI (cli, bundled in Cleaver Extension extension)

Shiga University of Medical Science in Japan

• Corner Annotation (scripted, bundled in Corner Annotation extension)

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)

SINAPSE

• Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)

SNR

• Path Explorer (loadable, bundled in Slicer IGT extension)
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

SPL

• DICOM2Full Brain Tractography (scripted, built-in)
• Label To DICOMSEGConverter Self Test
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Reporting Self Test
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

SPL B&W Harvard

• PBNRR (cli, bundled in PBNRR extension)

SPL, BWH

• ACPCTransform (cli, built-in)
• Annotations (loadable, built-in)
• BSpline To Deformation Field (cli, built-in)
• Cast Scalar Volume (cli, built-in)
• Colors (loadable, built-in)
• Data (loadable, built-in)
• Diffusion Tensor Scalar Measurements (cli, built-in)
• Diffusion Weighted Volume Masking (cli, built-in)
• DTIexport (cli, built-in)
• DTIimport (cli, built-in)
• DWITo DTIEstimation (cli, built-in)
• Fiducial Registration (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Image Label Combine (cli, built-in)
• Mask Scalar Volume (cli, built-in)
• Merge Models (cli, built-in)
• Model Maker (cli, built-in)
• Models (loadable, built-in)
• Model To Label Map (cli, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• N4ITKBias Field Correction (cli, built-in)
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Probe Volume With Model (cli, built-in)
• Reporting (loadable, bundled in Reporting extension)
• Robust Statistics Segmenter (cli, built-in)
• Scene Views (loadable, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)
• Test Grid Transform Registration (cli, built-in)
• Threshold Scalar Volume (cli, built-in)
• Tractography Label Map Seeding (cli, built-in)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volumes (loadable, built-in)
• Welcome (loadable, built-in)

SPL, BWH, UPenn

• Merge Models (cli, built-in)

SUMS

• Corner Annotation (scripted, bundled in Corner Annotation extension)

Surgical Planning Lab

• Label To DICOMSEGConverter (scripted, bundled in Reporting extension)

UAB

• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

UHN, Toronto

• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)

Uiowa

• DWIConvert (cli, built-in)

UIowa

• DWIConvert (cli, built-in)

UNC

• DWIRician LMMSEFilter (cli, built-in)
• Extract Skeleton (cli, built-in)
• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
• Port Placement (scripted, bundled in Port Placement extension)
• Resample DTIVolume (cli, built-in)
• Resample Scalar Vector DWIVolume (cli, built-in)

Univ of Michigan

• Surface Registration (scripted, bundled in CMFreg extension)

Univ. of Iowa

• DICOMPETSUVPlugin
• DICOMRWVMPlugin

University 'Magna Graecia' of Catanzaro

• Plastimatch Py (loadable, bundled in Slicer RT extension)

University College Cork

• Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)

University of Heidelberg

• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)

University of Iowa

• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

University of Iowa) and Andrey Fedorov (SPL

• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)

UPenn

• Annotations (loadable, built-in)
• EMSegment (loadable, built-in)
• N4ITKBias Field Correction (cli, built-in)
• Scene Views (loadable, built-in)

Utah

• Label Map Smoothing (cli, built-in)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

UVa

• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)

UWA

• Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)

WashU-St. Louis, dmarcus@wustl.edu

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

while at GE

• Pk Modeling (cli, bundled in Pk Modeling extension)

Modules by contributing individual

185 contributing individuals:

• /
• a
• Akila Viswanathan
• Alan Morris (Utah)
• Alex Yarmakovich (Isomics)
• Alex Yarmarkovich (Kitware))
• Ali Ghayoor
• Alireza Mehrtash (SPL and BWH)
• Allen Tannenbaum (Stony Brook University)
• Amelie Meyer (PerkLab, Queen's University)
• Analysis Laboratory
• Andinet Enquobahrie (Kitware)
• Andras Lasso (PerkLab, Queen's University)
• Andreas Freudling (SPL, BWH)
• Andrey Fedorov (SPL B&W Harvard)
• Andriy Kot (CRTC)
• Anonymous
• Antonio Damato
• Antonio Tristan Vega (UVa)
• Anuja Sharma
• Arie Nakhmani (UAB)
• Atsushi Yamada (SNR)
• Beatriz Paniagua from Department of Orthodontics (UNC)
• Benjamin Long (Kitware)
• Benjamin Yvernault
• Bill Lorensen (Noware)
• Brad Davis
• Bradley Lowekamp (MSC/NLM)
• Brian Zenger (CARMA)
• BWH
• c
• Carl-Fredrik Westin
• Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
• Casey B Goodlett (Kitware)
• Charles Marion (Kitware)
• Christian Baumgartner
• Csaba Pinter (PerkLab, Queen's University)
• Dan Marcus (Washington University in St. Louis)
• Daniel Blezek (GE)
• Daniel Haehn (UPenn)
• Danny Perry (Utah)
• Demian Wassermann (Brigham and Women's Hospital)
• Dinggang Shen (UNC)
• Dirk Padfield (GE)
• Dominik Meier (SPL, BWH)
• e
• er (Kingston General Hospital)
• Ethan Ulrich (Univ. of Iowa)
• Eugene Kholmovski (CARMA)
• ez (UVa)
• Fotis Drakopoulos (CRTC)
• Francois Budin (NIRAL, UNC)
• Franklin King (PerkLab, Queen's University)
• Greg Gardner (Utah)
• Greg Harris
• Greg Sharp (MGH, Boston)
• Gregory Sharp (MGH)
• Guido Gerig (UNC)
• Guillaume Pernelle
• Hans J. Johnson
• Hans Johnson (SINAPSE)
• hans-johnson -at- uiowa.edu
• http://www.psychiatry.uiowa.edu
• i
• Ipek Oguz
• Ivan Kolesov (Stony Brook University)
• Jan Egger
• Jayender Jagadeesan (BWH)
• Jean-Baptiste Berger (Kitware)
• Jean-Christophe Fillion-Robin (Kitware)
• Jennifer Andrea (PerkLab, Queen's University)
• Jessica Forbes (SINAPSE)
• Jim Miller (GE)
• Johan Andruejol (Kitware)
• John Evans (MGH)
• Jonathan Bronson (SCI Institute)
• Josh Cates (Utah)
• Joy Matsui (UIowa)
• Julien Finet (Kitware)
• Julien Jomier (Kitware)
• Junichi Tokuda (BWH)
• K
• Kent Williams (UIowa)
• Kent WIlliams
• Kevin Alex (Kingston General Hospital)
• Kevin Wang (Princess Margaret Cancer Centre)
• Kilian Pohl (UPenn)
• Koichiro Murakami (SUMS)
• Kyle Sunderl (Queen's University)
• l
• Lauren Barber
• Lauren O'Donnell (SPL, BWH)
• Laurent Chauvin (BWH)
• Liang-Jia Zhu (UAB)
• Liangjia Zhu (Stony Brook University)
• Luca Antiga (Orobix)
• Luis G. Torres (UNC)
• Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• m
• Marc Niethammer (UNC)
• Marcel Prastawa prastawa@sci.utah.edu
• Mark Scully (Uiowa)
• Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
• Martin Styner (UNC)
• Mason Winsauer
• Matt Lougheed (PerkLab, Queen's University)
• Mattea Welch (PerkLab, Queen's University)
• Matthew Holden (Queen's University)
• Matthew S. Holden (Queen's University)
• Matthew Woehlke (Kitware)
• Michael Jeulin-Lagarrigue (Kitware)
• Minjeong Kim (UNC)
• Nabgha Fahrat
• Neuro Image Resarch
• Nicholas Herlambang (AZE R&D)
• Nick Tustison (UPenn)
• Nicole Aucoin (BWH)
• Nigel Goh (UWA)
• Nikos Chrisochoides (CRTC)
• Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
• p
• Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
• Pat Marion (Kitware)
• Paul Mercea (University of Heidelberg)
• Pengdong Xiao (Department of Orthodontics, UNC)
• Peter Black (BWH)
• Peter Karasev (Georgia Tech)
• Peter Savadjiev (Kitware))
• Pierre Seroul (UNC)
• Pietro Nardelli (University College Cork)
• Please direct questions or suggestions to http://groups.google.com/group/plastimatch
• Polina Goll
• Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• R
• r
• Raul San Jose (SPL, BWH)
• Rob Mac Leod (Utah)
• Ron Kikinis (BWH)
• Ross Whitaker (Utah)
• Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• S
• Salma Bengali (CARMA)
• Sam Song
• Santiago Aja Fern (UVa)
• Sebastien Barré (Kitware)
• Sebastien Barre
• Shigeyuki Naka (SUMS)
• Soichiro Tani (BWH, SUMS)
• Sonia Pujol (SPL, BWH)
• Stefan Lienhard
• Stephen Aylward (Kitware)
• Stephen R Aylward (Kitware)
• Steve Pieper (SPL)
• Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
• Sylvain Bouix (BWH)
• Sylvain Gouttard
• t
• Tamas Ungi (PerkLab, Queen's University)
• the University of North Carolina at Chapel Hill (UNC)
• Tina Kapur
• Tobias Penzkofer
• Tohru Tani (SUMS)
• UNC Medical School
• Uof M School Of Dentistry
• Uof M School of Dentistry
• Vince Magnotta (UIowa)
• Vincent A. Magnotta
• Vincent Magnotta
• Vinicius Boen (Univ of Michigan)
• Vivek Narayan (BWH)
• Wendy Plesniak (SPL, BWH)
• Xiaodong Tao (GE)
• Xiaofeng Liu (GE GLobal Research)
• Xiaojun Chen
• y Wells
• Yanling Liu (SAIC-Frederick, NCI-Frederick)
• Yi Gao (BWH/UAB)
• Yinglin Lee (SPL, BWH)
• Yingxuan Zhu (GE)
• Yinpeng Li
• Yixun Liu (CRTC)
• Yogesh Rathi (yogesh@bwh.harvard.edu)
• Yong Zhang (IBM)
• Yumin Yuan
• Yundi Shi

/

• Dicom Rt Import Plugin

a

• Dicom Rt Import Plugin

Akila Viswanathan

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Alan Morris

• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Alex Yarmakovich

• Models (loadable, built-in)
• Tractography Interactive Seeding (loadable, built-in)

Alex Yarmarkovich

• Data (loadable, built-in)
• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)
• Image Label Combine (cli, built-in)
• Transforms (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volumes (loadable, built-in)

Ali Ghayoor

• BRAINSTransform Convert (cli, built-in)
• Perform Metric Test (cli, built-in)

Alireza Mehrtash

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)

Allen Tannenbaum

• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Robust Statistics Segmenter (cli, built-in)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

Amelie Meyer

• Plus Remote (scripted, bundled in Slicer IGT extension)

Analysis Laboratory

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)

Andinet Enquobahrie

• Port Placement (scripted, bundled in Port Placement extension)

Andras Lasso

• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Isodose (loadable, bundled in Slicer RT extension)
• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Metafile Importer (loadable, bundled in Multidim Data extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)
• Transforms (loadable, built-in)
• Volume Clip With Model (scripted, bundled in Volume Clip extension)
• Volume Clip With Roi (scripted, bundled in Volume Clip extension)

Andreas Freudling

• Volume Rendering (loadable, built-in)

Andrey Fedorov

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• BSpline To Deformation Field (cli, built-in)
• Change Tracker (scripted, bundled in Change Tracker extension)
• Change Tracker Self Test
• Crop Volume (loadable, built-in)
• DICOMRWVMPlugin
• DICOMSegmentation Plugin
• Intensity Difference Metric (cli, bundled in Change Tracker extension)
• Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
• Label To DICOMSEGConverter Self Test
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• Multi Volume Importer Plugin
• N4ITKBias Field Correction (cli, built-in)
• PBNRR (cli, bundled in PBNRR extension)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Reporting (loadable, bundled in Reporting extension)
• Reporting Self Test
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• TCIABrowser (scripted, bundled in TCIABrowser extension)
• Window Level Effect (scripted, bundled in Window Level Effect extension)

Andriy Kot

• PBNRR (cli, bundled in PBNRR extension)

Anonymous

• CLIROITest (cli, built-in)
• EMSegment Transform To New Format (cli, built-in)

Antonio Damato

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Antonio Tristan Vega

• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)
• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)

Anuja Sharma

• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)

Arie Nakhmani

• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

Atsushi Yamada

• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Path Explorer (loadable, bundled in Slicer IGT extension)

Beatriz Paniagua from Department of Orthodontics

• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Benjamin Long

• Sample Data (scripted, built-in)

Benjamin Yvernault

• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)

Bill Lorensen

• Add Scalar Volumes (cli, built-in)
• Checker Board Filter (cli, built-in)
• Create DICOMSeries (cli, built-in)
• Curvature Anisotropic Diffusion (cli, built-in)
• Diffusion Tensor Test (cli, built-in)
• Execution Model Tour (cli, built-in)
• Gradient Anisotropic Diffusion (cli, built-in)
• Grayscale Fill Hole Image Filter (cli, built-in)
• Grayscale Grind Peak Image Filter (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Histogram Matching (cli, built-in)
• Median Image Filter (cli, built-in)
• Model Maker (cli, built-in)
• Multiply Scalar Volumes (cli, built-in)
• Orient Scalar Volume (cli, built-in)
• Otsu Threshold Image Filter (cli, built-in)
• Resample Scalar Volume (cli, built-in)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
• Subtract Scalar Volumes (cli, built-in)
• Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
• Voting Binary Hole Filling Image Filter (cli, built-in)

Brad Davis

• EMSegment Command Line (cli, built-in)

Bradley Lowekamp

• Bin Shrink (cli, bundled in IASEM extension)
• Double Threshold Effect (scripted, bundled in IASEM extension)
• IASEMImport (cli, bundled in IASEM extension)
• IASEMImport Series (cli, bundled in IASEM extension)
• Label Object Statistics (scripted, bundled in IASEM extension)
• Simple Filters (scripted, built-in)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)

Brian Zenger

• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)

BWH

• DICOMSegmentation Plugin
• Multi Volume Importer Plugin

c

• Dicom Rt Import Plugin

Carl-Fredrik Westin

• UKFTractography (cli, bundled in UKFTractography extension)

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)

Casey B Goodlett

• Expert Automated Registration (cli, built-in)
• Fiducial Registration (cli, built-in)

Charles Marion

• Data Store (loadable, built-in)

Christian Baumgartner

• Convert VTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Csaba Pinter

• Beams (loadable, bundled in Slicer RT extension)
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Data (loadable, built-in)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Rt Import Self Test
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Dvh Comparison (scripted, bundled in Slicer RT extension)
• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
• Isodose (loadable, bundled in Slicer RT extension)
• NAMIC Tutorial 2013June Self Test
• Planar Image (loadable, bundled in Slicer RT extension)
• Subject Hierarchy (loadable, built-in)
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test
• Vff File Reader (loadable, bundled in Slicer RT extension)

Dan Marcus

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Daniel Blezek

• Execution Model Tour (cli, built-in)

Daniel Haehn

• Annotations (loadable, built-in)
• Centerline Computation (scripted, bundled in VMTK extension)
• EMSegment (loadable, built-in)
• EMSegment Command Line (cli, built-in)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Merge Models (cli, built-in)
• Scene Views (loadable, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)

Danny Perry

• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Demian Wassermann

• DICOM2Full Brain Tractography (scripted, built-in)
• Diffusion Weighted Volume Masking (cli, built-in)
• Fiber Bundle Label Select (cli, built-in)
• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)
• test tractography display
• Tractography Label Map Seeding (cli, built-in)

Dinggang Shen

• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Dirk Padfield

• Label Map Smoothing (cli, built-in)

Dominik Meier

• Fiducial Registration (cli, built-in)

e

• Dicom Rt Import Plugin

er

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Ethan Ulrich

• DICOMPETSUVPlugin
• DICOMRWVMPlugin
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Eugene Kholmovski

• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)

ez

• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)

Fotis Drakopoulos

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

Francois Budin

• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
• Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
• Resample DTIVolume (cli, built-in)
• Resample Scalar Vector DWIVolume (cli, built-in)

Franklin King

• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Transforms (loadable, built-in)

Greg Gardner

• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Greg Harris

• BRAINSDemon Warp (cli, built-in)
• BRAINSResample (cli, built-in)
• VBRAINSDemon Warp (cli, built-in)

Greg Sharp

• Dicom Rt Export (loadable, bundled in Slicer RT extension)

Gregory Sharp

• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Plm Register (scripted, bundled in Slicer RT extension)

Guido Gerig

• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Extract Skeleton (cli, built-in)

Guillaume Pernelle

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Hans J. Johnson

• BRAINSDemon Warp (cli, built-in)
• BRAINSFit (cli, built-in)
• BRAINSROIAuto (cli, built-in)
• BRAINSTransform Convert (cli, built-in)
• VBRAINSDemon Warp (cli, built-in)

Hans Johnson

• BRAINSResample (cli, built-in)
• BRAINSResize (cli, built-in)
• Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
• DWIConvert (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• UKFTractography (cli, bundled in UKFTractography extension)

hans-johnson -at- uiowa.edu

• BRAINSFit (cli, built-in)
• BRAINSROIAuto (cli, built-in)

http://www.psychiatry.uiowa.edu

• BRAINSFit (cli, built-in)
• BRAINSROIAuto (cli, built-in)

i

• Dicom Rt Import Plugin

Ipek Oguz

• Convert VTK (cli, bundled in UKFTractography extension)
• Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Ivan Kolesov

• Carrera Slice (loadable, bundled in Carrera Slice extension)

Jan Egger

• i Gyne (scripted, bundled in i Gyne extension)

Jayender Jagadeesan

• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• Segment CAD (scripted, bundled in Open CAD extension)
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

Jean-Baptiste Berger

• Data Store (loadable, built-in)
• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)

Jean-Christophe Fillion-Robin

• CLI4Test
• Data Store (loadable, built-in)
• Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
• fiber visibility crash2438
• label Toggle Bug2049
• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• Sample Data (scripted, built-in)
• Simple Filters (scripted, built-in)
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Transforms (loadable, built-in)
• View Controllers (loadable, built-in)
• Welcome (loadable, built-in)

Jennifer Andrea

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Vff File Reader (loadable, bundled in Slicer RT extension)

Jessica Forbes

• Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)

Jim Miller

• Charting (scripted, built-in)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• Simple Region Growing Segmentation (cli, built-in)
• Slice Link Logic (scripted, built-in)
• Slicer4Minute (scripted, built-in)
• View Controllers (loadable, built-in)
• View Controllers Slice Interpolation Bug1926

Johan Andruejol

• Units (loadable, built-in)

John Evans

• Pk Modeling (cli, bundled in Pk Modeling extension)

Jonathan Bronson

• Cleaver CLI (cli, bundled in Cleaver Extension extension)

Josh Cates

• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• Label Map Smoothing (cli, built-in)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Joy Matsui

• DWIConvert (cli, built-in)

Julien Finet

• Cameras (loadable, built-in)
• Colors (loadable, built-in)
• Data (loadable, built-in)
• Double Arrays (loadable, built-in)
• Event Broker
• Image Maker (cli, bundled in Image Maker extension)
• Models (loadable, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• Scene Performance (scripted, built-in)
• Threshold Scalar Volume (cli, built-in)
• Tractography Display (loadable, built-in)
• Transforms (loadable, built-in)
• Units (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volumes (loadable, built-in)

Julien Jomier

• Gaussian Blur Image Filter (cli, built-in)

Junichi Tokuda

• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Curve Maker (scripted, bundled in Curve Maker extension)
• Dilate Label (cli, bundled in Erode Dilate Label extension)
• Erode Label (cli, bundled in Erode Dilate Label extension)
• Path Explorer (loadable, bundled in Slicer IGT extension)
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)

K

• Dicom Rt Import Plugin

Kent Williams

• BRAINSDWICleanup (cli, built-in)
• BRAINSTransform Convert (cli, built-in)
• Convert VTK (cli, bundled in UKFTractography extension)
• DWIConvert (cli, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)

Kent WIlliams

• BRAINSStrip Rotation (cli, built-in)

Kevin Alex

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Kevin Wang

• Colors Scalar Bar Self Test
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Dicom Sro Import (loadable, bundled in Slicer RT extension)
• Dicom Sro Import Plugin
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Isodose (loadable, bundled in Slicer RT extension)
• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)

Kilian Pohl

• Annotations (loadable, built-in)
• Change Tracker (scripted, bundled in Change Tracker extension)
• EMSegment (loadable, built-in)
• EMSegment Command Line (cli, built-in)
• Scene Views (loadable, built-in)

Koichiro Murakami

• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)

Kyle Sunderl

• Dvh Comparison (scripted, bundled in Slicer RT extension)

l

• Dicom Rt Import Plugin

Lauren Barber

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Lauren O'Donnell

• Fiber Bundle Label Select (cli, built-in)
• Probe Volume With Model (cli, built-in)

Laurent Chauvin

• Curve Maker (scripted, bundled in Curve Maker extension)
• Dice Computation (loadable, bundled in Dice Computation extension)
• Path Explorer (loadable, bundled in Slicer IGT extension)
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

Liang-Jia Zhu

• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Liangjia Zhu

• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)

Luca Antiga

• Centerline Computation (scripted, bundled in VMTK extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Surface Toolbox (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)

Luis G. Torres

• Port Placement (scripted, bundled in Port Placement extension)

Luping Fang

• Gyro Guide (scripted, bundled in Gyro Guide extension)

m

• Dicom Rt Import Plugin

Marc Niethammer

• DWIRician LMMSEFilter (cli, built-in)

Marcel Prastawa prastawa@sci.utah.edu

• ABC (cli, bundled in ABC extension)

Mark Scully

• DWIConvert (cli, built-in)

Markus Van Tol

• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Martin Styner

• Convert VTK (cli, bundled in UKFTractography extension)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Extract Skeleton (cli, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)

Mason Winsauer

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)

Matt Lougheed

• Resection Volume (scripted, bundled in Resection Planner extension)
• Volume Clip With Model (scripted, bundled in Volume Clip extension)

Mattea Welch

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Matthew Holden

• Breach Warning (loadable, bundled in Slicer IGT extension)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Metafile Importer (loadable, bundled in Multidim Data extension)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)

Matthew S. Holden

• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)

Matthew Woehlke

• Extension Wizard (scripted, built-in)

Michael Jeulin-Lagarrigue

• Reformat (loadable, built-in)

Minjeong Kim

• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Nabgha Fahrat

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Neuro Image Resarch

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)

Nicholas Herlambang

• JRC2013Vis

Nick Tustison

• N4ITKBias Field Correction (cli, built-in)

Nicole Aucoin

• ACPCTransform (cli, built-in)
• Add Many Markups Fiducial Test
• Annotations (loadable, built-in)
• Cast Scalar Volume (cli, built-in)
• Colors (loadable, built-in)
• Colors Scalar Bar Self Test
• Data (loadable, built-in)
• Fiducial Layout Switch Bug1914
• Grayscale Model Maker (cli, built-in)
• Markups (loadable, built-in)
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Mask Scalar Volume (cli, built-in)
• Merge Models (cli, built-in)
• Model Maker (cli, built-in)
• Models (loadable, built-in)
• Model To Label Map (cli, built-in)
• Neurosurgical Planning Tutorial Markups Self Test
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Reporting (loadable, bundled in Reporting extension)
• Scene Views (loadable, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• Threshold Scalar Volume (cli, built-in)
• Volume Rendering Scene Close (scripted, built-in)
• Volumes (loadable, built-in)

Nigel Goh

• Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)

Nikos Chrisochoides

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

Olivier Clatz

• PBNRR (cli, bundled in PBNRR extension)

p

• Dicom Rt Import Plugin

Paolo Zaffino

• Plastimatch Py (loadable, bundled in Slicer RT extension)

Pat Marion

• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)

Paul Mercea

• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)

Pengdong Xiao

• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Peter Black

• Change Tracker (scripted, bundled in Change Tracker extension)

Peter Karasev

• Carrera Slice (loadable, bundled in Carrera Slice extension)

Peter Savadjiev

• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Pierre Seroul

• Extract Skeleton (cli, built-in)

Pietro Nardelli

• Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)

Please direct questions or suggestions to http://groups.google.com/group/plastimatch

• plastimatch slicer bspline (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
• plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
• plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)

Polina Goll

• EMSegment Command Line (cli, built-in)

Qing Pan

• Gyro Guide (scripted, bundled in Gyro Guide extension)

R

• Dicom Rt Import Plugin

r

• Dicom Rt Import Plugin

Raul San Jose

• Diffusion Tensor Scalar Measurements (cli, built-in)
• DWITo DTIEstimation (cli, built-in)
• Tractography Label Map Seeding (cli, built-in)

Rob MacLeod

• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Ron Kikinis

• ACPCTransform (cli, built-in)
• Cast Scalar Volume (cli, built-in)
• Change Tracker (scripted, bundled in Change Tracker extension)
• Crop Volume (loadable, built-in)
• Mask Scalar Volume (cli, built-in)
• Merge Models (cli, built-in)
• Model Maker (cli, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• N4ITKBias Field Correction (cli, built-in)
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Robust Statistics Segmenter (cli, built-in)
• Surface Toolbox (scripted, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• Threshold Scalar Volume (cli, built-in)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)

Ross Whitaker

• Label Map Smoothing (cli, built-in)

Ruifeng Chen

• Gyro Guide (scripted, bundled in Gyro Guide extension)

S

• Dicom Rt Import Plugin
• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Salma Bengali

• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)

Sam Song

• i Gyne (scripted, bundled in i Gyne extension)

Santiago Aja Fern

• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)

Sebastien Barré

• Cameras (loadable, built-in)

Sebastien Barre

• EMSegment Command Line (cli, built-in)

Shigeyuki Naka

• Corner Annotation (scripted, bundled in Corner Annotation extension)

Soichiro Tani

• Corner Annotation (scripted, bundled in Corner Annotation extension)

Sonia Pujol

• Dice Computation (loadable, bundled in Dice Computation extension)
• DTIexport (cli, built-in)
• DTIimport (cli, built-in)

Stefan Lienhard

• Convert VTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Stephen Aylward

• Extract Skeleton (cli, built-in)
• Gaussian Blur Image Filter (cli, built-in)

Stephen R Aylward

• Expert Automated Registration (cli, built-in)

Steve Pieper

• Atlas Tests
• Binary Watershed Effect (scripted, bundled in IASEM extension)
• Centerline Computation (scripted, bundled in VMTK extension)
• Compare Volumes (scripted, bundled in CMFreg extension)
• Data Probe (scripted, built-in)
• DICOM (scripted, built-in)
• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Endoscopy (scripted, built-in)
• fiber visibility crash2438
• Fiber Bundle To Label Map (scripted, built-in)
• label Toggle Bug2049
• Landmark Registration (scripted, bundled in CMFreg extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• Performance Tests
• Reporting (loadable, bundled in Reporting extension)
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data (scripted, built-in)
• scene Import2428
• Self Tests
• Simple Filters (scripted, built-in)
• slicer Close Crash Bug2590
• Slicer MRBTest
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Threshold Threading Test
• Vector To Scalar Volume (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)
• View Controllers (loadable, built-in)
• Volumes (loadable, built-in)
• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Sunil Kumar

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Sylvain Bouix

• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Sylvain Gouttard

• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)

t

• Dicom Rt Import Plugin

Tamas Ungi

• Breach Warning (loadable, bundled in Slicer IGT extension)
• Breach Warning Self Test
• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Create Models (loadable, bundled in Slicer IGT extension)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
• Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)

the University of North Carolina at Chapel Hill

• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Tina Kapur

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Tobias Penzkofer

• i Gyne (scripted, bundled in i Gyne extension)

Tohru Tani

• Corner Annotation (scripted, bundled in Corner Annotation extension)

UNC Medical School

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)

UofM School Of Dentistry

• Growing (cli, bundled in CMFreg extension)

UofM School of Dentistry

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)

Vince Magnotta

• DWIConvert (cli, built-in)

Vincent A. Magnotta

• BRAINSLabel Stats (cli, built-in)

Vincent Magnotta

• BRAINSResample (cli, built-in)

Vinicius Boen

• Apply Matrix (cli, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)
• Surface Registration (scripted, bundled in CMFreg extension)

Vivek Narayan

• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• Segment CAD (scripted, bundled in Open CAD extension)

Wendy Plesniak

• Annotations (loadable, built-in)
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Scene Views (loadable, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• View Controllers (loadable, built-in)
• Welcome (loadable, built-in)

Xiaodong Tao

• DWIConvert (cli, built-in)
• Model To Label Map (cli, built-in)

Xiaofeng Liu

• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Xiaojun Chen

• i Gyne (scripted, bundled in i Gyne extension)

y Wells

• i Gyne (scripted, bundled in i Gyne extension)
• Needle Finder (scripted, bundled in Needle Finder extension)

Yanling Liu

• Volume Rendering (loadable, built-in)

Yi Gao

• i Gyne (scripted, bundled in i Gyne extension)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Needle Finder (scripted, bundled in Needle Finder extension)
• Robust Statistics Segmenter (cli, built-in)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Yinglin Lee

• Test Grid Transform Registration (cli, built-in)

Yingxuan Zhu

• Pk Modeling (cli, bundled in Pk Modeling extension)

Yinpeng Li

• Convert VTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Yixun Liu

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• PBNRR (cli, bundled in PBNRR extension)

Yogesh Rathi

• Convert VTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Yong Zhang

• Annotations (loadable, built-in)

Yumin Yuan

• EMSegment Command Line (cli, built-in)

Yundi Shi

• Convert VTK (cli, bundled in UKFTractography extension)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• UKFTractography (cli, bundled in UKFTractography extension)

Modules by type

3 types:

• cli
• loadable
• scripted

cli

• ABC (cli, bundled in ABC extension)
• ACPCTransform (cli, built-in)
• Add Scalar Volumes (cli, built-in)
• Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
• Apply Matrix (cli, bundled in CMFreg extension)
• Bin Shrink (cli, bundled in IASEM extension)
• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• BRAINSDemon Warp (cli, built-in)
• BRAINSDWICleanup (cli, built-in)
• BRAINSFit (cli, built-in)
• BRAINSLabel Stats (cli, built-in)
• BRAINSResample (cli, built-in)
• BRAINSResize (cli, built-in)
• BRAINSROIAuto (cli, built-in)
• BRAINSStrip Rotation (cli, built-in)
• BRAINSTransform Convert (cli, built-in)
• BSpline To Deformation Field (cli, built-in)
• Cast Scalar Volume (cli, built-in)
• Checker Board Filter (cli, built-in)
• Cleaver CLI (cli, bundled in Cleaver Extension extension)
• CLIROITest (cli, built-in)
• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• Convert VTK (cli, bundled in UKFTractography extension)
• Create DICOMSeries (cli, built-in)
• Curvature Anisotropic Diffusion (cli, built-in)
• Diffusion Tensor Scalar Measurements (cli, built-in)
• Diffusion Tensor Test (cli, built-in)
• Diffusion Weighted Volume Masking (cli, built-in)
• Dilate Label (cli, bundled in Erode Dilate Label extension)
• Downsize (cli, bundled in CMFreg extension)
• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
• DTIexport (cli, built-in)
• DTIimport (cli, built-in)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• DWIConvert (cli, built-in)
• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWITo DTIEstimation (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)
• EMSegment Command Line (cli, built-in)
• EMSegment Transform To New Format (cli, built-in)
• Erode Label (cli, bundled in Erode Dilate Label extension)
• Execution Model Tour (cli, built-in)
• Expert Automated Registration (cli, built-in)
• Extract Skeleton (cli, built-in)
• Fiber Bundle Label Select (cli, built-in)
• Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Fiducial Registration (cli, built-in)
• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)
• Gaussian Blur Image Filter (cli, built-in)
• Gradient Anisotropic Diffusion (cli, built-in)
• Grayscale Fill Hole Image Filter (cli, built-in)
• Grayscale Grind Peak Image Filter (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Growing (cli, bundled in CMFreg extension)
• Histogram Matching (cli, built-in)
• IASEMImport (cli, bundled in IASEM extension)
• IASEMImport Series (cli, bundled in IASEM extension)
• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)
• Image Label Combine (cli, built-in)
• Image Maker (cli, bundled in Image Maker extension)
• Intensity Difference Metric (cli, bundled in Change Tracker extension)
• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Label Map Smoothing (cli, built-in)
• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Mask Scalar Volume (cli, built-in)
• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Median Image Filter (cli, built-in)
• Merge Models (cli, built-in)
• Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
• Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
• Model Maker (cli, built-in)
• Model To Label Map (cli, built-in)
• Multiply Scalar Volumes (cli, built-in)
• N4ITKBias Field Correction (cli, built-in)
• Non Growing (cli, bundled in CMFreg extension)
• Orient Scalar Volume (cli, built-in)
• Otsu Threshold Image Filter (cli, built-in)
• PBNRR (cli, bundled in PBNRR extension)
• Perform Metric Test (cli, built-in)
• PETStandard Uptake Value Computation (cli, built-in)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
• Pk Modeling (cli, bundled in Pk Modeling extension)
• plastimatch slicer bspline (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
• plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
• plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
• Probe Volume With Model (cli, built-in)
• Resample DTIVolume (cli, built-in)
• Resample Scalar Vector DWIVolume (cli, built-in)
• Resample Scalar Volume (cli, built-in)
• Robust Statistics Segmenter (cli, built-in)
• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
• Simple Region Growing Segmentation (cli, built-in)
• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
• Subtract Scalar Volumes (cli, built-in)
• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
• Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
• Test Grid Transform Registration (cli, built-in)
• Threshold Scalar Volume (cli, built-in)
• Tractography Label Map Seeding (cli, built-in)
• UKFTractography (cli, bundled in UKFTractography extension)
• VBRAINSDemon Warp (cli, built-in)
• Voting Binary Hole Filling Image Filter (cli, built-in)

loadable

• Annotations (loadable, built-in)
• Beams (loadable, bundled in Slicer RT extension)
• Breach Warning (loadable, bundled in Slicer IGT extension)
• Cameras (loadable, built-in)
• Carrera Slice (loadable, bundled in Carrera Slice extension)
• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Colors (loadable, built-in)
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Create Models (loadable, bundled in Slicer IGT extension)
• Crop Volume (loadable, built-in)
• Data (loadable, built-in)
• Data Store (loadable, built-in)
• Dice Computation (loadable, bundled in Dice Computation extension)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Sro Import (loadable, bundled in Slicer RT extension)
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Double Arrays (loadable, built-in)
• EMSegment (loadable, built-in)
• EMSegment Quick (loadable, built-in)
• Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
• Isodose (loadable, bundled in Slicer RT extension)
• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
• Markups (loadable, built-in)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
• Metafile Importer (loadable, bundled in Multidim Data extension)
• Models (loadable, built-in)
• Multi Volume Explorer (loadable, built-in)
• Open IGTLink IF (loadable, built-in)
• Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
• Path Explorer (loadable, bundled in Slicer IGT extension)
• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Planar Image (loadable, bundled in Slicer RT extension)
• Plastimatch Py (loadable, bundled in Slicer RT extension)
• Reformat (loadable, built-in)
• Reporting (loadable, bundled in Reporting extension)
• Scene Views (loadable, built-in)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)
• Subject Hierarchy (loadable, built-in)
• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
• Tractography Display (loadable, built-in)
• Tractography Interactive Seeding (loadable, built-in)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Transforms (loadable, built-in)
• Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
• Units (loadable, built-in)
• Vff File Reader (loadable, bundled in Slicer RT extension)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
• Volumes (loadable, built-in)
• Welcome (loadable, built-in)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)

scripted

• Binary Watershed Effect (scripted, bundled in IASEM extension)
• Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
• Centerline Computation (scripted, bundled in VMTK extension)
• Change Tracker (scripted, bundled in Change Tracker extension)
• Charting (scripted, built-in)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• Compare Volumes (scripted, bundled in CMFreg extension)
• Corner Annotation (scripted, bundled in Corner Annotation extension)
• Curve Maker (scripted, bundled in Curve Maker extension)
• Data Probe (scripted, built-in)
• DICOM (scripted, built-in)
• DICOM2Full Brain Tractography (scripted, built-in)
• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Double Threshold Effect (scripted, bundled in IASEM extension)
• Dvh Comparison (scripted, bundled in Slicer RT extension)
• Endoscopy (scripted, built-in)
• Extension Wizard (scripted, built-in)
• Fiber Bundle To Label Map (scripted, built-in)
• Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Gyro Guide (scripted, bundled in Gyro Guide extension)
• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• i Gyne (scripted, bundled in i Gyne extension)
• KUtil (scripted, bundled in Carrera Slice extension)
• Label Object Statistics (scripted, bundled in IASEM extension)
• Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
• Landmark Registration (scripted, bundled in CMFreg extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Multi Volume Importer (scripted, built-in)
• Needle Finder (scripted, bundled in Needle Finder extension)
• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
• Plm Register (scripted, bundled in Slicer RT extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Port Placement (scripted, bundled in Port Placement extension)
• Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Resection Volume (scripted, bundled in Resection Planner extension)
• Sample Data (scripted, built-in)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
• Scene Performance (scripted, built-in)
• Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
• Segment CAD (scripted, bundled in Open CAD extension)
• Simple Filters (scripted, built-in)
• Slice Link Logic (scripted, built-in)
• Slicer4Minute (scripted, built-in)
• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
• Surface Registration (scripted, bundled in CMFreg extension)
• Surface Toolbox (scripted, built-in)
• TCIABrowser (scripted, bundled in TCIABrowser extension)
• Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
• Vector To Scalar Volume (scripted, built-in)
• Vesselness Filtering (scripted, bundled in VMTK extension)
• Volume Clip With Model (scripted, bundled in Volume Clip extension)
• Volume Clip With Roi (scripted, bundled in Volume Clip extension)
• Volume Rendering Scene Close (scripted, built-in)
• Window Level Effect (scripted, bundled in Window Level Effect extension)
• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Modules by extension

55 extensions:

• ABC
• Airway Segmentation
• builtin
• Cardiac MRI Toolkit
• Cardiac Agaston Measures
• Carrera Slice
• CBC 3D I2MConversion
• Change Tracker
• Cleaver Extension
• CMFreg
• Corner Annotation
• Curve Maker
• Dice Computation
• DTIAtlas Fiber Analyzer
• Erode Dilate Label
• Fast Grow Cut Effect
• Finsler Tractography
• Gel Dosimetry Analysis
• Gyro Guide
• IASEM
• i Gyne
• Image Maker
• Intensity Segmenter
• LAScar Segmenter
• Longitudinal PETCT
• MABMIS
• Matlab Bridge
• Mesh To Label Map
• Multidim Data
• Needle Finder
• Open CAD
• PBNRR
• Percutaneous Approach Analysis
• Perk Tutor
• PETDICOMExtension
• Pk Modeling
• Port Placement
• Py Dev Remote Debug
• Reporting
• Resection Planner
• Scoliosis
• Segmentation Aided Registration
• VMTK
• Slicer IGT
• Slicer RT
• Slicer To Kiwi Exporter
• Sobolev Segmenter
• Swiss Skull Stripper
• TCIABrowser
• Thingiverse Browser
• Tracker Stabilizer
• UKFTractography
• Volume Clip
• Window Level Effect
• XNATSlicer

ABC

• ABC (cli, bundled in ABC extension)

AirwaySegmentation

• Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)

builtin

• ACPCTransform (cli, built-in)
• Add Scalar Volumes (cli, built-in)
• Annotations (loadable, built-in)
• BRAINSDemon Warp (cli, built-in)
• BRAINSDWICleanup (cli, built-in)
• BRAINSFit (cli, built-in)
• BRAINSLabel Stats (cli, built-in)
• BRAINSResample (cli, built-in)
• BRAINSResize (cli, built-in)
• BRAINSROIAuto (cli, built-in)
• BRAINSStrip Rotation (cli, built-in)
• BRAINSTransform Convert (cli, built-in)
• BSpline To Deformation Field (cli, built-in)
• Cameras (loadable, built-in)
• Cast Scalar Volume (cli, built-in)
• Charting (scripted, built-in)
• Checker Board Filter (cli, built-in)
• CLIROITest (cli, built-in)
• Colors (loadable, built-in)
• Create DICOMSeries (cli, built-in)
• Crop Volume (loadable, built-in)
• Curvature Anisotropic Diffusion (cli, built-in)
• Data (loadable, built-in)
• Data Probe (scripted, built-in)
• Data Store (loadable, built-in)
• DICOM (scripted, built-in)
• DICOM2Full Brain Tractography (scripted, built-in)
• Diffusion Tensor Scalar Measurements (cli, built-in)
• Diffusion Tensor Test (cli, built-in)
• Diffusion Weighted Volume Masking (cli, built-in)
• Double Arrays (loadable, built-in)
• DTIexport (cli, built-in)
• DTIimport (cli, built-in)
• DWIConvert (cli, built-in)
• DWIJoint Rician LMMSEFilter (cli, built-in)
• DWIRician LMMSEFilter (cli, built-in)
• DWITo DTIEstimation (cli, built-in)
• DWIUnbiased Non Local Means Filter (cli, built-in)
• EMSegment (loadable, built-in)
• EMSegment Command Line (cli, built-in)
• EMSegment Quick (loadable, built-in)
• EMSegment Transform To New Format (cli, built-in)
• Endoscopy (scripted, built-in)
• Execution Model Tour (cli, built-in)
• Expert Automated Registration (cli, built-in)
• Extension Wizard (scripted, built-in)
• Extract Skeleton (cli, built-in)
• Fiber Bundle Label Select (cli, built-in)
• Fiber Bundle To Label Map (scripted, built-in)
• Fiducial Registration (cli, built-in)
• Gaussian Blur Image Filter (cli, built-in)
• Gradient Anisotropic Diffusion (cli, built-in)
• Grayscale Fill Hole Image Filter (cli, built-in)
• Grayscale Grind Peak Image Filter (cli, built-in)
• Grayscale Model Maker (cli, built-in)
• Histogram Matching (cli, built-in)
• Image Label Combine (cli, built-in)
• Label Map Smoothing (cli, built-in)
• Markups (loadable, built-in)
• Mask Scalar Volume (cli, built-in)
• Median Image Filter (cli, built-in)
• Merge Models (cli, built-in)
• Model Maker (cli, built-in)
• Models (loadable, built-in)
• Model To Label Map (cli, built-in)
• Multiply Scalar Volumes (cli, built-in)
• Multi Volume Explorer (loadable, built-in)
• Multi Volume Importer (scripted, built-in)
• N4ITKBias Field Correction (cli, built-in)
• Open IGTLink IF (loadable, built-in)
• Orient Scalar Volume (cli, built-in)
• Otsu Threshold Image Filter (cli, built-in)
• Perform Metric Test (cli, built-in)
• PETStandard Uptake Value Computation (cli, built-in)
• Probe Volume With Model (cli, built-in)
• Reformat (loadable, built-in)
• Resample DTIVolume (cli, built-in)
• Resample Scalar Vector DWIVolume (cli, built-in)
• Resample Scalar Volume (cli, built-in)
• Robust Statistics Segmenter (cli, built-in)
• Sample Data (scripted, built-in)
• Scene Performance (scripted, built-in)
• Scene Views (loadable, built-in)
• Simple Filters (scripted, built-in)
• Simple Region Growing Segmentation (cli, built-in)
• Slice Link Logic (scripted, built-in)
• Slicer4Minute (scripted, built-in)
• Subject Hierarchy (loadable, built-in)
• Subtract Scalar Volumes (cli, built-in)
• Surface Toolbox (scripted, built-in)
• Test Grid Transform Registration (cli, built-in)
• Threshold Scalar Volume (cli, built-in)
• Tractography Display (loadable, built-in)
• Tractography Interactive Seeding (loadable, built-in)
• Tractography Label Map Seeding (cli, built-in)
• Transforms (loadable, built-in)
• Units (loadable, built-in)
• VBRAINSDemon Warp (cli, built-in)
• Vector To Scalar Volume (scripted, built-in)
• View Controllers (loadable, built-in)
• Volume Rendering (loadable, built-in)
• Volume Rendering Scene Close (scripted, built-in)
• Volumes (loadable, built-in)
• Voting Binary Hole Filling Image Filter (cli, built-in)
• Welcome (loadable, built-in)

Cardiac_MRI_Toolkit

• CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
• CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
• LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
• Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)

CardiacAgastonMeasures

• Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)

CarreraSlice

• Carrera Slice (loadable, bundled in Carrera Slice extension)
• Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
• KUtil (scripted, bundled in Carrera Slice extension)

CBC_3D_I2MConversion

• Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
• Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)

ChangeTracker

• Change Tracker (scripted, bundled in Change Tracker extension)
• Intensity Difference Metric (cli, bundled in Change Tracker extension)

CleaverExtension

• Cleaver CLI (cli, bundled in Cleaver Extension extension)

CMFreg

• Apply Matrix (cli, bundled in CMFreg extension)
• Compare Volumes (scripted, bundled in CMFreg extension)
• Downsize (cli, bundled in CMFreg extension)
• Growing (cli, bundled in CMFreg extension)
• Label Addition (cli, bundled in CMFreg extension)
• Label Extraction (cli, bundled in CMFreg extension)
• Landmark Registration (scripted, bundled in CMFreg extension)
• Mask Creation (cli, bundled in CMFreg extension)
• Non Growing (cli, bundled in CMFreg extension)
• Surface Registration (scripted, bundled in CMFreg extension)

CornerAnnotation

• Corner Annotation (scripted, bundled in Corner Annotation extension)

CurveMaker

• Curve Maker (scripted, bundled in Curve Maker extension)

DiceComputation

• Dice Computation (loadable, bundled in Dice Computation extension)

DTIAtlasFiberAnalyzer

• DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
• dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
• Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)

ErodeDilateLabel

• Dilate Label (cli, bundled in Erode Dilate Label extension)
• Erode Label (cli, bundled in Erode Dilate Label extension)

FastGrowCutEffect

• Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)

FinslerTractography

• Finsler Backtracing (cli, bundled in Finsler Tractography extension)
• Finsler Tractography (cli, bundled in Finsler Tractography extension)

GelDosimetryAnalysis

• Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
• Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)

GyroGuide

• Gyro Guide (scripted, bundled in Gyro Guide extension)

IASEM

• Binary Watershed Effect (scripted, bundled in IASEM extension)
• Bin Shrink (cli, bundled in IASEM extension)
• Double Threshold Effect (scripted, bundled in IASEM extension)
• IASEMImport (cli, bundled in IASEM extension)
• IASEMImport Series (cli, bundled in IASEM extension)
• Label Object Statistics (scripted, bundled in IASEM extension)
• Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)

iGyne

• i Gyne (scripted, bundled in i Gyne extension)

ImageMaker

• Image Maker (cli, bundled in Image Maker extension)

IntensitySegmenter

• Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

LAScarSegmenter

• LAScar Segmenter (cli, bundled in LAScar Segmenter extension)

LongitudinalPETCT

• Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
• PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)

MABMIS

• IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
• IGR3D MABMIS Training (cli, bundled in MABMIS extension)

MatlabBridge

• Matlab Commander (cli, bundled in Matlab Bridge extension)
• Matlab Module Generator (loadable, bundled in Matlab Bridge extension)

MeshToLabelMap

• Mesh To Label Map (cli, bundled in Mesh To Label Map extension)

MultidimData

• Metafile Importer (loadable, bundled in Multidim Data extension)
• Sequence Browser (loadable, bundled in Multidim Data extension)
• Sequences (loadable, bundled in Multidim Data extension)

NeedleFinder

• Needle Finder (scripted, bundled in Needle Finder extension)

OpenCAD

• Heterogeneity CAD (scripted, bundled in Open CAD extension)
• Segment CAD (scripted, bundled in Open CAD extension)

PBNRR

• PBNRR (cli, bundled in PBNRR extension)

PercutaneousApproachAnalysis

• Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)

PerkTutor

• Perk Evaluator (loadable, bundled in Perk Tutor extension)
• Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
• Transform Recorder (loadable, bundled in Perk Tutor extension)
• Workflow Segmentation (loadable, bundled in Perk Tutor extension)

PETDICOMExtension

• SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

PkModeling

• Pk Modeling (cli, bundled in Pk Modeling extension)

PortPlacement

• Port Placement (scripted, bundled in Port Placement extension)

PyDevRemoteDebug

• Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)

Reporting

• Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
• Reporting (loadable, bundled in Reporting extension)

ResectionPlanner

• Resection Volume (scripted, bundled in Resection Planner extension)

Scoliosis

• Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
• Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)

SegmentationAidedRegistration

• Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

SlicerExtension-VMTK

• Centerline Computation (scripted, bundled in VMTK extension)
• Level Set Segmentation (scripted, bundled in VMTK extension)
• Vesselness Filtering (scripted, bundled in VMTK extension)

SlicerIGT

• Breach Warning (loadable, bundled in Slicer IGT extension)
• Collect Fiducials (loadable, bundled in Slicer IGT extension)
• Create Models (loadable, bundled in Slicer IGT extension)
• Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
• Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
• Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
• Path Explorer (loadable, bundled in Slicer IGT extension)
• Pivot Calibration (loadable, bundled in Slicer IGT extension)
• Plus Remote (scripted, bundled in Slicer IGT extension)
• Transform Fusion (loadable, bundled in Slicer IGT extension)
• Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
• Volume Reslice Driver (loadable, bundled in Slicer IGT extension)

SlicerRT

• Beams (loadable, bundled in Slicer RT extension)
• Contour Comparison (loadable, bundled in Slicer RT extension)
• Contour Morphology (loadable, bundled in Slicer RT extension)
• Contours (loadable, bundled in Slicer RT extension)
• Dicom Rt Export (loadable, bundled in Slicer RT extension)
• Dicom Rt Import (loadable, bundled in Slicer RT extension)
• Dicom Sro Export (scripted, bundled in Slicer RT extension)
• Dicom Sro Import (loadable, bundled in Slicer RT extension)
• Dose Accumulation (loadable, bundled in Slicer RT extension)
• Dose Comparison (loadable, bundled in Slicer RT extension)
• Dose Volume Histogram (loadable, bundled in Slicer RT extension)
• Dvh Comparison (scripted, bundled in Slicer RT extension)
• Isodose (loadable, bundled in Slicer RT extension)
• Planar Image (loadable, bundled in Slicer RT extension)
• plastimatch slicer bspline (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
• plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
• plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
• plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
• Plastimatch Py (loadable, bundled in Slicer RT extension)
• Plm Register (scripted, bundled in Slicer RT extension)
• Vff File Reader (loadable, bundled in Slicer RT extension)

SlicerToKiwiExporter

• Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)

SobolevSegmenter

• Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

SwissSkullStripper

• Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)

TCIABrowser

• TCIABrowser (scripted, bundled in TCIABrowser extension)

ThingiverseBrowser

• Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)

TrackerStabilizer

• Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

UKFTractography

• Convert VTK (cli, bundled in UKFTractography extension)
• UKFTractography (cli, bundled in UKFTractography extension)

VolumeClip

• Volume Clip With Model (scripted, bundled in Volume Clip extension)
• Volume Clip With Roi (scripted, bundled in Volume Clip extension)

WindowLevelEffect

• Window Level Effect (scripted, bundled in Window Level Effect extension)

XNATSlicer

• Xnat Slicer (scripted, bundled in XNATSlicer extension)

Extensions by name

54 extensions:

• ABC
• Airway Segmentation
• Cardiac MRI Toolkit
• Cardiac Agaston Measures
• Carrera Slice
• CBC 3D I2MConversion
• Change Tracker
• Cleaver Extension
• CMFreg
• Corner Annotation
• Curve Maker
• Dice Computation
• DTIAtlas Fiber Analyzer
• Erode Dilate Label
• Fast Grow Cut Effect
• Finsler Tractography
• Gel Dosimetry Analysis
• Gyro Guide
• IASEM
• i Gyne
• Image Maker
• Intensity Segmenter
• LAScar Segmenter
• Longitudinal PETCT
• MABMIS
• Matlab Bridge
• Mesh To Label Map
• Multidim Data
• Needle Finder
• Open CAD
• PBNRR
• Percutaneous Approach Analysis
• Perk Tutor
• PETDICOMExtension
• Pk Modeling
• Port Placement
• Py Dev Remote Debug
• Reporting
• Resection Planner
• Scoliosis
• Segmentation Aided Registration
• VMTK
• Slicer IGT
• Slicer RT
• Slicer To Kiwi Exporter
• Sobolev Segmenter
• Swiss Skull Stripper
• TCIABrowser
• Thingiverse Browser
• Tracker Stabilizer
• UKFTractography
• Volume Clip
• Window Level Effect
• XNATSlicer

Extensions by category

25 categories:

• Cardiac
• Cardiac MRI toolkit
• Converters
• Developer Tools
• Diffusion
• Editor Effects
• Exporter
• Filtering
  • Morphology
• IGT
• Informatics
• Mesh Generation
• Microscopy
• Multidimensional data
• Quantification
• Radiotherapy
• Registration
• Remote
• Scoliosis
• Segmentation
• Shape Analysis
• Tractography
• Training
• Utilities
• Vascular Modeling Toolkit
• Wizards

Cardiac

• Cardiac Agaston Measures

Cardiac MRI toolkit

• Cardiac MRI Toolkit

Converters

• PETDICOMExtension

Developer Tools

• Image Maker
• Matlab Bridge
• Py Dev Remote Debug

Diffusion

• DTIAtlas Fiber Analyzer

Editor Effects

• Window Level Effect

Exporter

• Slicer To Kiwi Exporter

Filtering

Morphology

• Erode Dilate Label

IGT

• Port Placement
• Gyro Guide
• Corner Annotation
• Percutaneous Approach Analysis
• Needle Finder
• Slicer IGT
• Tracker Stabilizer
• i Gyne
• Resection Planner

Informatics

• Reporting
• Longitudinal PETCT
• TCIABrowser
• Curve Maker

Mesh Generation

• CBC 3D I2MConversion
• Cleaver Extension

Microscopy

• IASEM

Multidimensional data

• Multidim Data

Quantification

• Dice Computation
• Pk Modeling

Radiotherapy

• Slicer RT
• Gel Dosimetry Analysis

Registration

• CMFreg
• Segmentation Aided Registration
• PBNRR

Remote

• XNATSlicer

Scoliosis

• Scoliosis

Segmentation

• Airway Segmentation
• Open CAD
• Swiss Skull Stripper
• Carrera Slice
• LAScar Segmenter
• Intensity Segmenter
• MABMIS
• ABC
• Sobolev Segmenter
• Fast Grow Cut Effect
• Volume Clip

Shape Analysis

• Mesh To Label Map

Tractography

• Finsler Tractography
• UKFTractography

Training

• Perk Tutor

Utilities

• Thingiverse Browser

Vascular Modeling Toolkit

• VMTK

Wizards

• Change Tracker

Extensions by contributing organization

54 contributing organizations:

• Asclepios INRIA) and Nikos Chrisochoides (CRTC
• Boston Childrens Hospital
• Brigham and Women's Hospital
• BWH
• BWH & MGH
• BWH, SPL
• BWH/UAB
• CARMA
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
• Crisalix
• CRTC
• Department of Neurosurgery, PLA General Hospital, Beijing, China
• Department of Orthodontics, UNC
• GE
• GE GLobal Research
• GT
• Isomics
• Kitware
• Massachusetts General Hospital
• Moka Creative LLC, Washington University in St. Louis
• NIRAL, UNC
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan
• Shiga University of Medical Science, Japan, SPL
• SPL
• SPL and BWH
• SPL B&W Harvard
• SRI
• Stony Brook University
• Surgical Planning Lab
• UAB
• UIowa
• UNC
• Univ of Michigan
• University College Cork
• University of Bern
• University of Heidelberg
• University of Iowa
• University of Utah
• Utah
• UWA
• Washington University in St. Louis
• yogesh@bwh.harvard.edu

Asclepios INRIA) and Nikos Chrisochoides (CRTC

• PBNRR

Boston Childrens Hospital

• VMTK

Brigham and Women's Hospital

• Erode Dilate Label
• Slicer IGT

BWH

• Change Tracker
• Curve Maker
• Dice Computation
• Fast Grow Cut Effect
• Open CAD
• Pk Modeling
• Segmentation Aided Registration
• Tracker Stabilizer

BWH & MGH

• Carrera Slice

BWH, SPL

• PETDICOMExtension

BWH/UAB

• Segmentation Aided Registration

CARMA

• Cardiac MRI Toolkit

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

• Gyro Guide

Crisalix

• Swiss Skull Stripper

CRTC

• CBC 3D I2MConversion
• PBNRR

Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide

Department of Orthodontics, UNC

• Intensity Segmenter

GE

• Pk Modeling

GE GLobal Research

• MABMIS

GT

• Carrera Slice

Isomics

• Carrera Slice
• Finsler Tractography
• VMTK
• Slicer To Kiwi Exporter
• XNATSlicer

Kitware

• Change Tracker
• Image Maker
• Matlab Bridge
• Port Placement
• VMTK
• Slicer To Kiwi Exporter

Massachusetts General Hospital

• Slicer RT

Moka Creative LLC, Washington University in St. Louis

• XNATSlicer

NIRAL, UNC

• Intensity Segmenter

Noware

• Swiss Skull Stripper

Orobix

• VMTK

PerkLab at Queen's University

• Py Dev Remote Debug

PerkLab, Queen's

• Multidim Data

PerkLab, Queen's University

• Gel Dosimetry Analysis
• Matlab Bridge
• Scoliosis
• Slicer RT
• Volume Clip

PMH

• Multidim Data

Queen's University

• Perk Tutor
• Resection Planner
• Slicer IGT

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Bridge
• Slicer RT

SBU

• LAScar Segmenter

SCI Institute

• Cleaver Extension

Shiga University of Medical Science, Japan

• Corner Annotation

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis

SPL

• Change Tracker
• Percutaneous Approach Analysis
• Reporting
• Window Level Effect

SPL and BWH

• TCIABrowser

SPL B&W Harvard

• PBNRR

SRI

• Pk Modeling

Stony Brook University

• Carrera Slice
• Fast Grow Cut Effect

Surgical Planning Lab

• Longitudinal PETCT

UAB

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• Segmentation Aided Registration
• Sobolev Segmenter

UIowa

• Cardiac Agaston Measures

UNC

• CMFreg
• DTIAtlas Fiber Analyzer
• MABMIS
• Mesh To Label Map
• Port Placement

Univ of Michigan

• CMFreg

University College Cork

• Airway Segmentation

University of Bern

• Swiss Skull Stripper

University of Heidelberg

• Longitudinal PETCT

University of Iowa

• PETDICOMExtension

University of Utah

• ABC

Utah

• LAScar Segmenter
• Segmentation Aided Registration

UWA

• Thingiverse Browser

Washington University in St. Louis

• XNATSlicer

yogesh@bwh.harvard.edu

• UKFTractography

Extensions by contributing individual

125 contributing individuals:

• Akila Viswanathan
• Alan Morris (Utah)
• Alex Yarmarkovich (Kitware))
• Alireza Mehrtash (SPL and BWH)
• Allen Tannenbaum (Stony Brook University)
• Andinet Enquobahrie (Kitware)
• Andras Lasso (PerkLab, Queen's University)
• Andre Mastmeyer
• Andrey Fedorov (SPL B&W Harvard)
• Andriy Fedorov (BWH)
• Andriy Kot (CRTC)
• Antonio Damato
• Antonio Tristan-Vega (Isomics)
• Arie Nakhmani (UAB)
• Arnaud Gelas (Crisalix)
• Atsushi Yamada (SNR)
• Beatriz Paniagua (UNC)
• Bill Lorensen (Noware)
• Bradley Lowekamp (MSC/NLM)
• Brig Bagley (SCI Institute)
• Carl-Fredrik Westin
• Christian Baumgartner
• Csaba Pinter (PerkLab, Queen's University)
• Dan Marcus (Washington University in St. Louis)
• Daniel Haehn (UPenn)
• Danny Perry (Utah)
• Demian Wasssermann
• Dinggang Shen (UNC)
• Ethan Ulrich (Univ. of Iowa)
• Eugene Kholmovski (CARMA)
• Fotis Drakopoulos (CRTC)
• Francois Budin (NIRAL, UNC)
• Franklin King (PerkLab, Queen's University)
• Greg Gardner (Utah)
• Greg Sharp (MGH, Boston)
• Guillaume Pernelle
• Hans Johnson (SINAPSE)
• Ipek Oguz
• Ivan Kolesov (Stony Brook University)
• Jan Egger
• Jayender Jagadeesan (BWH)
• Jean-Christophe Fillion-Robin (Kitware)
• Jennifer Andrea (PerkLab, Queen's University)
• Jessica Forbes (SINAPSE)
• Jiashu Zhang (Department of Neurosurgery, PLA General Hospital, Beijing, China)
• Jim Miller (GE)
• Jonathan Bronson (SCI Institute)
• Josh Cates (Utah)
• Julien Finet (Kitware)
• Junichi Tokuda (BWH)
• Karl Fritscher (BWH & MGH)
• Kent Williams (UIowa)
• Kevin Wang (Princess Margaret Cancer Centre)
• Kilian Pohl (UPenn)
• Koichiro Murakami (SUMS)
• Lauren Barber
• Laurent Chauvin (BWH)
• Liang-Jia Zhu (UAB)
• Liangjia Zhu (Stony Brook University)
• Luca Antiga (Orobix)
• Luis G. Torres (UNC)
• Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• Mahnaz Maddah (SRI)
• Manson Winsauer (UNC)
• Marcel Prastawa (University of Utah)
• Martin Styner (UNC)
• Matt Lougheed (PerkLab, Queen's University)
• Mattea Welch (PerkLab, Queen's University)
• Matthew Holden (Queen's University)
• Matthew S. Holden (Queen's University)
• Mauricio Reyes (University of Bern)
• Ming-ching Chang (GE)
• Minjeong Kim (UNC)
• Nabgha Fahrat
• Nicole Aucoin (BWH)
• Nigel Goh (UWA)
• Nikos Chrisochoides (CRTC)
• Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
• Pat Marion (Kitware)
• Patricio Vela (GT)
• Paul Mercea (University of Heidelberg)
• Pengdong Xiao (Department of Orthodontics, UNC)
• Peter Black (BWH)
• Peter Karasev (Georgia Tech)
• Peter Savadjiev (Kitware))
• Pietro Nardelli (University College Cork)
• Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• Rick Herrick (Washington University in St. Louis)
• Rob Mac Leod (Utah)
• Ron Kikinis (BWH)
• Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
• Ryan Eckbo
• S
• Salma Bengali (CARMA)
• Sam Song
• Stefan Bauer (University of Bern)
• Stefan Lienhard
• Steve Pieper (SPL)
• Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
• Sylvain Bouix (BWH)
• Tamas Ungi (PerkLab, Queen's University)
• Thomas Fejes (University of Bern)
• Tina Kapur
• Tobias Penzkofer
• Vinicius Boen (Univ of Michigan)
• Vivek Narayan (BWH)
• Xiaofeng Liu (GE GLobal Research)
• Xiaojun Chen
• Xiaolei Chen (Department of Neurosurgery, PLA General Hospital, Beijing, China)
• y Wells
• Yi Gao (BWH/UAB)
• Yingxuan Zhu (GE)
• Yinpeng Li
• Yixun Liu (CRTC)
• Yogesh Rathi (yogesh@bwh.harvard.edu)
• Yundi Shi

Akila Viswanathan

• i Gyne
• Needle Finder

Alan Morris

• Cardiac MRI Toolkit
• LAScar Segmenter
• Segmentation Aided Registration

Alex Yarmarkovich

• Finsler Tractography

Alireza Mehrtash

• i Gyne
• Needle Finder
• TCIABrowser

Allen Tannenbaum

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• Segmentation Aided Registration
• Sobolev Segmenter

Andinet Enquobahrie

• Port Placement

Andras Lasso

• Matlab Bridge
• Multidim Data
• Py Dev Remote Debug
• Slicer RT
• Tracker Stabilizer
• Volume Clip

Andre Mastmeyer

• Needle Finder

Andrey Fedorov

• CBC 3D I2MConversion
• Change Tracker
• Longitudinal PETCT
• PBNRR
• PETDICOMExtension
• Reporting
• TCIABrowser
• Window Level Effect

Andriy Fedorov

• Pk Modeling

Andriy Kot

• PBNRR

Antonio Damato

• i Gyne
• Needle Finder

Antonio Tristan-Vega

• Finsler Tractography

Arie Nakhmani

• Sobolev Segmenter

Arnaud Gelas

• Swiss Skull Stripper

Atsushi Yamada

• Corner Annotation

Beatriz Paniagua

• Intensity Segmenter

Bill Lorensen

• Swiss Skull Stripper

Bradley Lowekamp

• IASEM

Brig Bagley

• Cleaver Extension

Carl-Fredrik Westin

• Finsler Tractography
• UKFTractography

Christian Baumgartner

• UKFTractography

Csaba Pinter

• Gel Dosimetry Analysis
• Slicer RT

Dan Marcus

• XNATSlicer

Daniel Haehn

• VMTK

Danny Perry

• LAScar Segmenter
• Segmentation Aided Registration

Demian Wasssermann

• Finsler Tractography

Dinggang Shen

• MABMIS

Ethan Ulrich

• PETDICOMExtension

Eugene Kholmovski

• Cardiac MRI Toolkit

Fotis Drakopoulos

• CBC 3D I2MConversion
• PBNRR

Francois Budin

• DTIAtlas Fiber Analyzer
• Intensity Segmenter
• Mesh To Label Map

Franklin King

• Scoliosis

Greg Gardner

• LAScar Segmenter
• Segmentation Aided Registration

Greg Sharp

• Slicer RT

Guillaume Pernelle

• i Gyne
• Needle Finder

Hans Johnson

• Cardiac Agaston Measures
• UKFTractography

Ipek Oguz

• UKFTractography

Ivan Kolesov

• Carrera Slice
• Fast Grow Cut Effect

Jan Egger

• i Gyne
• Needle Finder

Jayender Jagadeesan

• Open CAD
• Tracker Stabilizer

Jean-Christophe Fillion-Robin

• Change Tracker
• Matlab Bridge
• VMTK
• Slicer To Kiwi Exporter

Jennifer Andrea

• Gel Dosimetry Analysis

Jessica Forbes

• Cardiac Agaston Measures

Jiashu Zhang

• Gyro Guide

Jim Miller

• MABMIS
• Pk Modeling

Jonathan Bronson

• Cleaver Extension

Josh Cates

• Cardiac MRI Toolkit
• LAScar Segmenter
• Segmentation Aided Registration

Julien Finet

• Image Maker

Junichi Tokuda

• Curve Maker
• Erode Dilate Label
• Percutaneous Approach Analysis
• Slicer IGT

Karl Fritscher

• Carrera Slice

Kent Williams

• UKFTractography

Kevin Wang

• Matlab Bridge
• Multidim Data
• Slicer RT

Kilian Pohl

• Change Tracker

Koichiro Murakami

• Percutaneous Approach Analysis

Lauren Barber

• i Gyne
• Needle Finder

Laurent Chauvin

• Dice Computation
• Percutaneous Approach Analysis
• Tracker Stabilizer

Liang-Jia Zhu

• Segmentation Aided Registration

Liangjia Zhu

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter

Luca Antiga

• VMTK

Luis G. Torres

• Port Placement

Luping Fang

• Gyro Guide

Mahnaz Maddah

• Pk Modeling

Manson Winsauer

• CMFreg

Marcel Prastawa

• ABC

Martin Styner

• UKFTractography

Matt Lougheed

• Resection Planner
• Volume Clip

Mattea Welch

• Gel Dosimetry Analysis

Matthew Holden

• Multidim Data

Matthew S. Holden

• Perk Tutor

Mauricio Reyes

• Swiss Skull Stripper

Ming-ching Chang

• Pk Modeling

Minjeong Kim

• MABMIS

Nabgha Fahrat

• i Gyne
• Needle Finder

Nicole Aucoin

• Reporting

Nigel Goh

• Thingiverse Browser

Nikos Chrisochoides

• CBC 3D I2MConversion

Olivier Clatz

• PBNRR

Pat Marion

• Slicer To Kiwi Exporter

Patricio Vela

• Carrera Slice

Paul Mercea

• Longitudinal PETCT

Pengdong Xiao

• Intensity Segmenter

Peter Black

• Change Tracker

Peter Karasev

• Carrera Slice

Peter Savadjiev

• Finsler Tractography
• UKFTractography

Pietro Nardelli

• Airway Segmentation

Qing Pan

• Gyro Guide

Rick Herrick

• XNATSlicer

Rob MacLeod

• Cardiac MRI Toolkit
• LAScar Segmenter
• Segmentation Aided Registration

Ron Kikinis

• Change Tracker
• Fast Grow Cut Effect

Ruifeng Chen

• Gyro Guide

Ryan Eckbo

• UKFTractography

S

• i Gyne
• Needle Finder

Salma Bengali

• Cardiac MRI Toolkit

Sam Song

• i Gyne
• Needle Finder

Stefan Bauer

• Swiss Skull Stripper

Stefan Lienhard

• UKFTractography

Steve Pieper

• Carrera Slice
• Reporting
• VMTK
• Slicer To Kiwi Exporter
• Window Level Effect
• XNATSlicer

Sunil Kumar

• XNATSlicer

Sylvain Bouix

• Segmentation Aided Registration

Tamas Ungi

• Perk Tutor
• Scoliosis
• Slicer IGT

Thomas Fejes

• Swiss Skull Stripper

Tina Kapur

• i Gyne
• Needle Finder

Tobias Penzkofer

• i Gyne
• Needle Finder

Vinicius Boen

• CMFreg

Vivek Narayan

• Open CAD

Xiaofeng Liu

• MABMIS

Xiaojun Chen

• i Gyne
• Needle Finder

Xiaolei Chen

• Gyro Guide

y Wells

• i Gyne
• Needle Finder

Yi Gao

• Carrera Slice
• Fast Grow Cut Effect
• i Gyne
• LAScar Segmenter
• Needle Finder
• Segmentation Aided Registration

Yingxuan Zhu

• Pk Modeling

Yinpeng Li

• UKFTractography

Yixun Liu

• CBC 3D I2MConversion
• PBNRR

Yogesh Rathi

• UKFTractography

Yundi Shi

• UKFTractography