Slicer3:How to implement an Interactive Module GUI

How to implement an Interactive Module GUI for Slicer3

Note: The material on this page describes the KWWidgets based module implementation. A New set of information is available as part of the Qt port of Slicer.

A number of files (source code, CMakeLists, config files) are needed to build a module. A convenient helper script has been created to automatically create the skeleton of an interactive module:

http://www.na-mic.org/Wiki/index.php/Slicer3:SkeletonGenerator

Virtual Methods

At the slicer-developers tcon 2007-02-13, we discussed some adjustments to the virtual methods in vtkSlicerModuleGUI for better consistency and utility. The following list defines the methods that a module needs to implement so the main application (Slicer3.cxx) can operate on all modules generically:

The following methods are defined by the vtkSlicerModuleGUI and typically won't be overriden:

• Enter
  • called when module is raised
  • calls CreateGUI if needed (instance variable tracks create state)
  • calls AddGUIObservers
  • calls UpdateGUI
• Exit
  • called when module is replaced by another
  • calls RemoveMRMLObservers

The following methods should be defined by the Module to implement the specific behavior:

• CreateGUI
  • instances and packs widgets
• DestroyGUI
  • typically called only by destructor
  • breaks any reference cycles
  • Deletes widgets
• ProcessGUIEvents
  • responds to events from widgets or slicer GUI classes
  • propagates data from GUI into MRML nodes
• ProcessMRMLEvents
  • responds to updates to MRML nodes
  • propagates data from MRML to widgets
• AddGUIObservers
  • set observers on widgets and GUI classes (use GUICallbackCommand local instance -- it will call ProcessGUIEvents)
• AddMRMLObservers
  • set observers on MRML nodes and scene (use MRMLCallbackCommand local instance -- it will call ProcessMRMLEvents)
• RemoveGUIObservers
• RemoveMRMLObservers
• UpdateGUI
  • copy state from MRML nodes to GUI/Widgets
  • if needed for efficiency, check the MTime for the MRML Node and the corresponding GUI and only update if needed (e.g. for a MultiColumnList or other widget the holds a lot of data)
• UpdateMRML
  • copy state from GUI/Widgets to MRML

Usage

NOTE: this description may change as Slicer3 moves from Beta to official release. The figure below shows a current overview of the three classes a new module (called MyModule for example) will need to define (vtkSlicerMyModuleGUI, vtkSlicerMyModuleLogic and vtkMRMLMyModuleNode) and some of the methods those classes should include to utilize the Slicer3 infrastructure. These classes should reside in the Slicer3/Modules/MyModule/ directory. If there are only one or two MRML class files, these can be in the top directory; if there are many files, you can create a Slicer3/Modules/MyModule/MRML directory. Slicer3/Libs/MRML should only include nodes that are part of the "primary" MRML support, i.e. things that make sense to include in the MRML file for data interchange.

Deriving your GUI class

To create a Module GUI that expresses its interface in Slicer's shared UIpanel, derive your class (vtkSlicerMyModuleGUI) from vtkSlicerModuleGUI. For a Module GUI that expresses its interface in a different panel of the Main Slicer Window, or in a toplevel widget, derive vtkSlicerMyModuleGUI from vtkSlicerComponentGUI instead. Your GUI class will inherit application logic and MRML pointers, an API for setting and observing them, and a framework for defining MRML, Logic and GUI callbacks from its parent class. Specific mediator methods, other logic and MRML node pointers can be added to the module's class definition. Importantly, keep logic and MRML classes independent of the GUI to facilitate testing and command-line execution possible *without* instantiating the Slicer3 GUI.

Example: An early example to work from is the GradientAnisotropicDiffusionFilter Module; define all the widgets you need within the class and create Get Macros for each of them. Define the methods you need from vtkSlicerModuleGUI and its parent class vtkSlicerComponentGUI, including BuildGUI(); in this method, you'll first add a page to the class's UIPanel (for now, only create one page).

Two GUI styles

Two styles: Depending on whether you want a notebook-style GUI for your module (similar to the style used in Slicer2) or a set of stacked collapsible frames to contain different logical sections of your interface like "help" and "display", your BuildGUI() method can be written in one of two ways. The notebook style may be appropriate for modules with long logical sections within their GUI, to minimize the amount of scrolling required of a user. The collapsing style may be appropriate for modules that have numerous logical sections, since the amount of horizontal space across which a notebook would array them is limited. The way these two styles are expressed in Slicer3's GUI panel is shown below.

Collapsing style: The GradientAnisotropicDiffusionFilter Module example implements the collapsible style, first adding a single new Page in its UIPanel:

 this->UIPanel->AddPage ( "MyModule", "MyModule", NULL );

then creating a vtkSlicerModuleCollapsibleFrame widget for each logical section in the GUI, parenting each to the UIPanel's single PageWidget, then creating, configuring and packing them from top to bottom in the UIPanel's PageWidget. Each logical section's widgets can be organized inside each of the vtkSlicerModuleCollapsibleFrames. The superclass has some helper methods to construct consisten Help&About Frames across modules.

 //--- help and about frame
 const char *help = "MyModule does the following...";
 const char *about = "This work was supported by...";
 vtkKWWidget *page = this->UIPanel->GetPageWidget ("MyModule");
 this->BuildHelpAndAboutFrame ( page, help, about );

 //--- rest of the frames
 vtkSlicerModuleCollapsibleFrame *firstFrame = vtkSlicerModuleCollapsibleFrame::New ( );
 vtkSlicerModuleCollapsibleFrame *secondFrame = vtkSlicerModuleCollapsibleFrame::New ( );
 vtkSlicerModuleCollapsibleFrame *thirdFrame = vtkSlicerModuleCollapsibleFrame::New ( );
 vtkSlicerModuleCollapsibleFrame *forthFrame = vtkSlicerModuleCollapsibleFrame::New ( );
 ...
 //--- parenting the frames to the same UIpanel page
 firstFrame->SetParent ( page );
 secondFrame->SetParent ( page );
 ...
 //--- parenting widgets to the various frames
 this->widget2->SetParent ( firstFrame->GetFrame () );
 this->widget3->SetParent ( secondFrame->GetFrame () );

Notebook style: To create a notebook style GUI (as there is no example yet, a little code will be included here), a new Page must be added to the UIPanel for every tab in the notebook:

 //--- get a pointer to the KWUserInterfaceManagerNotebook
 vtkKWUserInterfaceManagerNotebook *nbm = vtkKWUserInterfaceManagerNotebook::SafeDownCast ( this->UIPanel->GetUserInterfaceManager());
 //--- help and about frame
 this->UIPanel->AddPage ( "Help&About", "Information about using this module", NULL );
 const char *help = "MyModule does the following...";
 const char *about = "This work was supported by...";
 vtkKWWidget *page = this->UIPanel->GetPageWidget ("Help");
 this->BuildHelpAndAboutFrame ( page, help, about );

 //--- pages for other frames
 int page1ID = this->UIPanel->AddPage ( "First", "Functionality for some logical piece of module", NULL );
 int page2ID = this->UIPanel->AddPage ( "Second", "Functionality for another logical piece of module", NULL );

 //--- enabling or disabling notebook tabs
 nbm->GetNotebook()->SetPageEnabled ( page1ID, 1 );
 nbm->GetNotebook()->SetPageEnabled ( page2ID, 0 );

Widgets to be packed within each notebook page are parented to the PageWidget:

 this->widget2->SetParent ( this->UIPanel->GetPageWidget ( "First" ) );
 this->widget3->SetParent ( this->UIPanel->GetPageWidget ( "Second" ) );

or can be parented to a widget already parented to the PageWidget. Then they themselves can be created, configured, and packed in the same manner as they are in the GradientAnisotropicDiffusionFilter Module.

Defining methods

Methods to define: Define the methods you require from vtkSlicerComponentGUI base class, like: AddGUIObservers(), RemoveGUIObservers(), ProcessLogicEvents(), ProcessGUIEevents(), ProcessMRMLEvents(), Enter() and Exit(); and whatever else your module needs. (Eventually, available modules will be automatically detected, but this is not yet implemented; then, the Enter() method will probably be made to call the BuildGUI() method. For now, instantiate your class in Slicer3.cxx and call its BuildGUI() and other methods, following the pattern for other modules established there.)

Adding and removing observers

Adding observers: In AddGUIObservers, add an observer on each widget whose events you want to process. When an event is observed, the ProcessGUIEvents() method is called via the GUICallbackCommand; define this class to propagate information from the GUI to logic and MRML. Though it is tempting, try not to use ProcessGUIEvents() to update the GUI state directly -- just modify the Logic state, and allow observers on the logic and subsequent processing in ProcessLogicEvents() and ProcessMRMLEvents() to bring that state change BACK into the GUI.

Removing observers: In RemoveGUIObservers, make sure you remove every observer you've added to widgets in the GUI before calling Delete() on your widget. Make sure you call SetAndObserveMRML() and SetAndObserveLogic( ) with NULL pointers in your GUI class destructor to remove all observers on MRML and Logic that you have created.

Adding and removing references

For convenience, you may want to define pointers to Slicer's MainViewer, or to the SliceViewers, etc. Before Delete() can be called on anything you are referencing, you'll need to release the references. (Failure to release references can result in vtkDebugLeak reports on Application exit). The virtual method TearDownGUI() (inherited from vtkSlicerComponentGUI) can be defined for this purpose. References may be released in this method, and you can also use this method to call RemoveGUIObservers() if you don't want to explicitly call that method.

Defining new widgets

Defining your own widgets: The framework for doing this is still evolving. Currently there are two types of new widgets, those defined as extensions to vtkKW (like vtkKWWindowLevelThresholdEditor.h/cxx) and those defined as Slicer-specific widgets, (like vtkSlicerSliceControlWidget.h/cxx, derived from the vtkSlicerWidget.h/cxx base class). The Slicer widgets have methods for putting observers on their widget components, Logic and MRML, and processing events as well. Thus GUI classes that instance them do not have to manage events for them if the widgets' methods are used instead.

Using Undo and Redo

Undo: Make sure you process those events that mark junctures at which MRML state should be saved for Undo/Redo (using MRML's SaveStateForUndo() method. For instance, when an entry widget's value has changed, before changing a parameter in the appropriate MRML node, make a call to the MRMLScene's SaveStateForUndo() method with that node as a parameter. Save MRML state at reasonable junctures: for instance, for scale widgets, save MRML state when the scale starts changing, rather than continuously as the scale changes. For an example of they way SaveStateForUndo() is called, see slicer3/Base/GUI/vtkSlicerSliceControllerWidget.cxx. A detailed description of how undo/redo works, and how to use it in your module is available here.

Adding the module to the rest of Slicer3

Other files you will have to touch: follow the pattern used by the GradientAnisotropicDiffusionFilter module.

• create your own module folder in the Slicer3/Modules directory
• create your own CMakeLists.txt file
• create the following files: vtkMyModuleWin32Header.h, vtkMyModuleConfigure.h.in and vtkMyModule.h following the pattern set by other Modules (See Slicer3:Module Link Setup for Windows)
• add your module SUBDIR to the CMakeLists.txt file in the Slicer3/Modules directory above.

Miscellaneous

Helpful tips:

• Make the vtkModuleCollapsibleFrames which contain the major logical sections of your module members of your module GUI class and expose them through your API. Doing so helps other developers, who may want to offer a jump to your module's functionality, to programmatically raise your UIpanel and expand the frame they're interested in. This paradigm will help to promote fluid navigation of slicer's interface and the reuse of existing functionality.

• See the Module Link Setup for Windows

Build Support

Module Building