Developer Meetings/20120814

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Home < Developer Meetings < 20120814

Attendees:

To discuss

  • Plan for 4.2 hangout
  • Pick up general discussion from last time of the bug roadmap for slicer 4.2.
  • Status update on Mac extensions packaging issues
  • Reporting extension is missing on the dashboards -- why?
    • RESOLVED (thanks Chris Mullins!): the git path was not read-only; issue has been submitted to notify developers of extensions of the issues while cloning so that they could fix http://na-mic.org/Mantis/view.php?id=2395
  • Windows 64 bit nightly builds?
  • Update on volume rendering for mac (nvidia)?
  • setting up Slicer 32/64 bit Slicer dashboard on Windows questions
    • Current issues: no .log file is generated; there are build errors, but ctest does not stop when errors are encountered; how to turn off multi-CPU during build?
    • .bat script:
"C:\Program Files (x86)\CMake 2.8.8\bin\ctest.exe" -S C:\andrey\DashboardScripts\Lebesgue_Win7-32bits_slicer_release_nightly.cmake -V -o C:\S4D\Nightly-32bit.log
    • .cmake config file:
####################################################################################
# OS      :
# Hardware:
# GPU     :
####################################################################################
# WARNING - The specific version and processor type of this machine should be reported
# in the header above. Indeed, this file will be send to the dashboard as a NOTE file.
#
# On linux, you could run:
#     'uname -o' and 'cat /etc/*-release' to obtain the OS name.
#     'uname -mpi' to obtain hardware details.
#     'glxinfo | grep OpenGL' to obtain GPU details.
####################################################################################

cmake_minimum_required(VERSION 2.8.8)

#
# For additional information, see http://http://www.slicer.org/wiki/Documentation/Snapshot/Developers/Tutorials/DashboardSetup
#

#-----------------------------------------------------------------------------
# Dashboard properties
#-----------------------------------------------------------------------------
set(MY_OPERATING_SYSTEM   "Windows") # Windows, Linux, Darwin...
set(MY_COMPILER           "Visual Studio 9 2008")
set(MY_QT_VERSION         "4.7.4")
set(QT_QMAKE_EXECUTABLE   "C:/dev/Qt-4.7.4-win32/bin/qmake.exe")
set(CTEST_SITE            "lebesgue.partners.org") # for example: mymachine.kitware, mymachine.bwh.harvard.edu, ...
set(CTEST_DASHBOARD_ROOT  "C:/S4D/")

# Each dashboard script should specify a unique ID per CTEST_DASHBOARD_ROOT.
# It means the following directories will be created:
#   <CTEST_DASHBOARD_ROOT>/<DIRECTORY_NAME>-<DIRECTORY_IDENTIFIER>        # Source directory
#   <CTEST_DASHBOARD_ROOT>/<DIRECTORY_NAME>-<DIRECTORY_IDENTIFIER>-build  # Build directory
set(DIRECTORY_IDENTIFIER  "0")

# Open a shell and type in "cmake --help" to obtain the proper spelling of the generator
set(CTEST_CMAKE_GENERATOR "Visual Studio 9 2008")
set(MY_BITNESS            "32")

#-----------------------------------------------------------------------------
# Dashboard options
#-----------------------------------------------------------------------------
set(WITH_KWSTYLE FALSE)
set(WITH_MEMCHECK FALSE)
set(WITH_COVERAGE FALSE)
set(WITH_DOCUMENTATION FALSE)
#set(DOCUMENTATION_ARCHIVES_OUTPUT_DIRECTORY ) # for example: $ENV{HOME}/Projects/Doxygen
set(WITH_PACKAGES FALSE)
set(WITH_EXTENSIONS FALSE) # Indicates if 'trusted' Slicer extensions should be
                           # built, tested, packaged and uploaded.
set(CTEST_BUILD_CONFIGURATION "Release")
set(CTEST_TEST_TIMEOUT 500)
set(CTEST_BUILD_FLAGS "") # Use multiple CPU cores to build. For example "-j4" on unix
set(CTEST_PARALLEL_LEVEL 1) # Number of tests running in parallel

# experimental:
#     - run_ctest() macro will be called *ONE* time
#     - binary directory will *NOT* be cleaned
# continuous:
#     - run_ctest() macro will be called EVERY 5 minutes ...
#     - binary directory will *NOT* be cleaned
#     - configure/build will be executed *ONLY* if the repository has been updated
# nightly:
#     - run_ctest() macro will be called *ONE* time
#     - binary directory *WILL BE* cleaned
set(SCRIPT_MODE "nightly") # "experimental", "continuous", "nightly"

# You could invoke the script with the following syntax:
#  ctest -S karakoram_Slicer4_nightly.cmake -C <CTEST_BUILD_CONFIGURATION> -V
#
# Note that '-C <CTEST_BUILD_CONFIGURATION>' is mandatory on windows

#-----------------------------------------------------------------------------
# Additional CMakeCache options
#-----------------------------------------------------------------------------
set(ADDITIONAL_CMAKECACHE_OPTION "
  ADDITIONAL_C_FLAGS:STRING=
  ADDITIONAL_CXX_FLAGS:STRING=
  Slicer_USE_PYTHONQT:BOOL=ON
  Slicer_USE_PYTHONQT_WITH_TCL:BOOL=ON
  Slicer_BUILD_CLI:BOOL=OFF
")

#-----------------------------------------------------------------------------
# List of test that should be explicitly disabled on this machine
#-----------------------------------------------------------------------------
set(TEST_TO_EXCLUDE_REGEX "")

#-----------------------------------------------------------------------------
# Set any extra environment variables here
#-----------------------------------------------------------------------------
if(UNIX)
  set(ENV{DISPLAY} ":0")
endif()

#-----------------------------------------------------------------------------
# Required executables
#-----------------------------------------------------------------------------
find_program(CTEST_SVN_COMMAND NAMES svn)
find_program(CTEST_GIT_COMMAND NAMES git)
find_program(CTEST_COVERAGE_COMMAND NAMES gcov)
find_program(CTEST_MEMORYCHECK_COMMAND NAMES valgrind)

#-----------------------------------------------------------------------------
# Build Name
#-----------------------------------------------------------------------------
# Update the following variable to match the chosen build options. This variable is used to
# generate both the build directory and the build name.
# See http://www.cdash.org/CDash/index.php?project=Slicer4 for examples
set(BUILD_OPTIONS_STRING "${MY_BITNESS}bits-QT${MY_QT_VERSION}-PythonQt-With-Tcl-NoCLI")

#-----------------------------------------------------------------------------
# Directory name
#-----------------------------------------------------------------------------
set(DIRECTORY_NAME "Slicer")

#-----------------------------------------------------------------------------
# Build directory
#-----------------------------------------------------------------------------
set(CTEST_BINARY_DIRECTORY "${CTEST_DASHBOARD_ROOT}/${DIRECTORY_NAME}-${DIRECTORY_IDENTIFIER}-build")
file(WRITE "${CTEST_DASHBOARD_ROOT}/${DIRECTORY_NAME}-${DIRECTORY_IDENTIFIER}-build - ${BUILD_OPTIONS_STRING}-${CTEST_BUILD_CONFIGURATION}-${SCRIPT_MODE}.txt" "Generated by ${CTEST_SCRIPT_NAME}")

#-----------------------------------------------------------------------------
# Source directory
#-----------------------------------------------------------------------------
set(CTEST_SOURCE_DIRECTORY "${CTEST_DASHBOARD_ROOT}/${DIRECTORY_NAME}-${DIRECTORY_IDENTIFIER}")


##########################################
# WARNING: DO NOT EDIT BEYOND THIS POINT #
##########################################

set(CTEST_NOTES_FILES "${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}")

#
# Project specific properties
#
set(CTEST_PROJECT_NAME "Slicer4")
set(CTEST_BUILD_NAME "${MY_OPERATING_SYSTEM}-${MY_COMPILER}-${BUILD_OPTIONS_STRING}-${CTEST_BUILD_CONFIGURATION}")

#
# Display build info
#
message("CTEST_SITE ................: ${CTEST_SITE}")
message("CTEST_BUILD_NAME ..........: ${CTEST_BUILD_NAME}")
message("SCRIPT_MODE ...............: ${SCRIPT_MODE}")
message("CTEST_BUILD_CONFIGURATION .: ${CTEST_BUILD_CONFIGURATION}")
message("WITH_KWSTYLE ..............: ${WITH_KWSTYLE}")
message("WITH_COVERAGE: ............: ${WITH_COVERAGE}")
message("WITH_MEMCHECK .............: ${WITH_MEMCHECK}")
message("WITH_PACKAGES .............: ${WITH_PACKAGES}")
message("WITH_DOCUMENTATION ........: ${WITH_DOCUMENTATION}")
message("DOCUMENTATION_ARCHIVES_OUTPUT_DIRECTORY: ${DOCUMENTATION_ARCHIVES_OUTPUT_DIRECTORY}")

#
# Convenient function allowing to download a file
#
function(download_file url dest)
  file(DOWNLOAD ${url} ${dest} STATUS status)
  list(GET status 0 error_code)
  list(GET status 1 error_msg)
  if(error_code)
    message(FATAL_ERROR "error: Failed to download ${url} - ${error_msg}")
  endif()
endfunction()

#
# Download and include dashboard driver script
#
set(url http://svn.slicer.org/Slicer4/trunk/CMake/SlicerDashboardDriverScript.cmake)
set(dest ${CTEST_SCRIPT_DIRECTORY}/${CTEST_SCRIPT_NAME}.driver)
download_file(${url} ${dest})
include(${dest})

Conclusion

  • Chris will continue to look for a python path fix for mac - if not fixed by end of week, Andrey will implement workaround inside his extension.
  • Chris rebooted build machine which should fix the win64 build.
  • Steve will email slicer 4.2 hangout invite to DBPs:
    • Hans & Kent
    • Greg & Nadia
    • Jack & Andre
    • Rob & Josh
  • Discussed these bugs from the bug tracker:

- 0002114: [Building (CMake, Superbuild)] Ensure Slicer can be compiled against ITKv4 on both Windows 32 and 64 bit (hjmjohnson) - assigned. - 0002113: [Module EMSegment] Ensure EMSegment is compatible with ITKv4 (pohl) - closed. - 0002163: [GUI] models hierarchy is not workable (finetjul) - assigned. - 0001922: [Scripting (Wrapping, Python)] add a self-testing module (pieper) - assigned. - 0002358: [Extensions] Python wrapping in extensions fails on Mac (jcfr) - assigned. - 0002373: [Extensions] SkullStripper is available in the Extensions Manager but can NOT be installed (jcfr) - assigned. - 0002313: [Base Code] Implement onSDBSaveToDCMActionTriggered (pieper) - assigned. - 0002321: [Building (CMake, Superbuild)] Fix gcc 4.6.x link error related to libvtkPythonCore.so.5.10.0 - undefined reference to `Py*' (crmullin) - assigned. - 0002367: [Building (CMake, Superbuild)] Fix ubuntu factory error "Xlib: extension "GLX" missing on display ":0.0" (crmullin) - assigned. - 0001669: [Usability] Add recent loaded files menu entry in File menu bar (crmullin) - assigned. - 0002187: [QtTesting] Do not used "activated" signal since it doesn't map to "clicked" in a cross platform fashion (finetjul) - assigned. - 0002380: [Base Code] Transforms module issue: display of translation component when values exceed default max values (jcfr) - assigned. - 0002371: [Building (CMake, Superbuild)] Update factory ITKv4 nightly script to enable packaging (crmullin) - assigned. - 0002372: [Building (CMake, Superbuild)] Coordinate ITKv4 packaging with maintainer of download.slicer.org (crmullin) - assigned. - 0002115: [Building (CMake, Superbuild)] Mechanism to customize Slicer package name depending on build option (jcfr) - assigned. - 0001455: [Command Line Modules (Modules/CLI)] Launching CLI modules from command line (jcfr) - assigned. - 0002349: [Extensions] No output is submitted to the dashboard if a module generic test fails (crmullin) - assigned. - 0002370: [Documentation & Wiki] Document Slicer factory organization (crmullin) - assigned. - 0002365: [Extensions] ExtensionsIndex workflow improvments (jcfr) - assigned. - 0001838: [Module DICOM] Viewing DICOM header info. (assign to Steve Pieper) (pieper) - assigned. - 0001670: [Usability] Add "copy CTRL+C", "cut CTRL+X" and "paste CTRL+V" in Edit menu bar (crmullin) - assigned. - 0001537: [Base Code] Exit from tcl adapter causes seg fault when exiting program (finetjul) - assigned. - 0002343: [Base Code] Implement last test in qMRMLColorPickerWidgetTest2 (finetjul) - assigned. - 0002340: [Base Code] Option "autoLevel" and "interpolate" are not considered in vtkSlicerVolumesLogic::AddArchetypeVolume (alexy) - assigned.

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