User:UpdateBot/Issue-2843-Consolidated-Extension-List

• Modules by name
• Modules by category
• Modules by contributing organization
• Modules by contributing individual
• Modules by type
• Extensions by name
• Extensions by category
• Extensions by contributing organization
• Extensions by contributing individual

Modules by name

156 modules:

• ABC cli, bundled in ABC extension
• ACPCTransform cli, built-in
• Add Scalar Volumes cli, built-in
• Airway Segmentation CLI cli, bundled in Airway Segmentation extension
• Annotations loadable, built-in
• Apply Matrix cli, bundled in CMFreg extension
• Bin Shrink cli, bundled in IASEM extension
• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• BRAINSDemon Warp cli, built-in
• BRAINSDWICleanup cli, built-in
• BRAINSFit cli, built-in
• BRAINSLabel Stats cli, built-in
• BRAINSResample cli, built-in
• BRAINSResize cli, built-in
• BRAINSROIAuto cli, built-in
• BRAINSTransform Convert cli, built-in
• Carrera Slice loadable, bundled in Carrera Slice extension
• Cast Scalar Volume cli, built-in
• Change Tracker scripted, bundled in Change Tracker extension
• Checker Board Filter cli, built-in
• Cleaver CLI cli, bundled in Cleaver Extension extension
• Colors loadable, built-in
• Compare Volumes scripted, bundled in CMFreg extension
• Corner Annotation scripted, bundled in Corner Annotation extension
• Create DICOMSeries cli, built-in
• Crop Volume loadable, built-in
• Curvature Anisotropic Diffusion cli, built-in
• Curve Maker scripted, bundled in Curve Maker extension
• Data loadable, built-in
• Data Probe scripted, built-in
• Data Store loadable, built-in
• Dice Computation loadable, bundled in Dice Computation extension
• DICOM scripted, built-in
• DICOM2Full Brain Tractography scripted, built-in
• Diffusion Tensor Scalar Measurements cli, built-in
• Diffusion Weighted Volume Masking cli, built-in
• Dilate Label cli, bundled in Erode Dilate Label extension
• Downsize cli, bundled in CMFreg extension
• DWIConvert cli, built-in
• DWIJoint Rician LMMSEFilter cli, built-in
• DWIRician LMMSEFilter cli, built-in
• DWITo DTIEstimation cli, built-in
• Editor scripted, built-in
• EMSegment loadable, built-in
• EMSegment Command Line cli, built-in
• EMSegment Quick loadable, built-in
• EMSegment Transform To New Format cli, built-in
• Endoscopy scripted, built-in
• Erode Label cli, bundled in Erode Dilate Label extension
• Extract Skeleton cli, built-in
• Fast Grow Cut loadable, bundled in Fast Grow Cut Effect extension
• Fast Grow Cut Segmenter loadable, bundled in Carrera Slice extension
• Fiber Bundle Label Select cli, built-in
• Fiber Bundle To Label Map scripted, built-in
• Fiducial Registration cli, built-in
• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension
• Gaussian Blur Image Filter cli, built-in
• Gel Dosimetry Analysis Algo loadable, bundled in Gel Dosimetry Analysis extension
• Gradient Anisotropic Diffusion cli, built-in
• Grayscale Fill Hole Image Filter cli, built-in
• Grayscale Grind Peak Image Filter cli, built-in
• Grayscale Model Maker cli, built-in
• Growing cli, bundled in CMFreg extension
• Gyro Guide scripted, bundled in Gyro Guide extension
• Histogram Matching cli, built-in
• IASEMImport cli, bundled in IASEM extension
• IASEMImport Series cli, bundled in IASEM extension
• IGR3D MABMIS Testing cli, bundled in MABMIS extension
• IGR3D MABMIS Training cli, bundled in MABMIS extension
• i Gyne scripted, bundled in i Gyne extension
• Image Label Combine cli, built-in
• Intensity Difference Metric cli, bundled in Change Tracker extension
• Intensity Segmenter cli, bundled in Intensity Segmenter extension
• KUtil scripted, bundled in Carrera Slice extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Label Map Smoothing cli, built-in
• Label Object Statistics scripted, bundled in IASEM extension
• Label Statistics scripted, built-in
• Label To DICOMSEGConverter scripted, bundled in Reporting extension
• Landmark Registration scripted, bundled in CMFreg extension
• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension
• Markups loadable, built-in
• Mask Creation cli, bundled in CMFreg extension
• Mask Scalar Volume cli, built-in
• Median Image Filter cli, built-in
• Merge Models cli, built-in
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• Metafile Importer loadable, bundled in Multidim Data extension
• Model Maker cli, built-in
• Models loadable, built-in
• Model To Label Map cli, built-in
• Multiply Scalar Volumes cli, built-in
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• N4ITKBias Field Correction cli, built-in
• Needle Finder scripted, bundled in Needle Finder extension
• Non Growing cli, bundled in CMFreg extension
• Open IGTLink IF loadable, built-in
• Orient Scalar Volume cli, built-in
• PBNRR cli, bundled in PBNRR extension
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension
• Perform Metric Test cli, built-in
• Perk Evaluator loadable, bundled in Perk Tutor extension
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Pk Modeling cli, bundled in Pk Modeling extension
• Port Placement scripted, bundled in Port Placement extension
• Probe Volume With Model cli, built-in
• Python Metrics Calculator scripted, bundled in Perk Tutor extension
• Reformat loadable, built-in
• Reporting loadable, bundled in Reporting extension
• Resample DTIVolume cli, built-in
• Resample Scalar Vector DWIVolume cli, built-in
• Robust Statistics Segmenter cli, built-in
• Sample Data scripted, built-in
• Scene Views loadable, built-in
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension
• Simple Filters scripted, built-in
• Simple Region Growing Segmentation cli, built-in
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Sobolev Segmenter cli, bundled in Sobolev Segmenter extension
• Spacing Aware Curvature Diffusion cli, bundled in IASEM extension
• Spinal Curvature Measurement scripted, bundled in Scoliosis extension
• Subject Hierarchy loadable, built-in
• Subtract Scalar Volumes cli, built-in
• Surface Registration scripted, bundled in CMFreg extension
• Surface Toolbox scripted, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• Swiss Skull Stripper cli, bundled in Swiss Skull Stripper extension
• TCIABrowser scripted, bundled in TCIABrowser extension
• Thingiverse Browser scripted, bundled in Thingiverse Browser extension
• Threshold Scalar Volume cli, built-in
• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension
• Tractography Display loadable, built-in
• Tractography Interactive Seeding loadable, built-in
• Tractography Label Map Seeding cli, built-in
• Transform Recorder loadable, bundled in Perk Tutor extension
• Transforms loadable, built-in
• Units loadable, built-in
• VBRAINSDemon Warp cli, built-in
• Vector To Scalar Volume scripted, built-in
• View Controllers loadable, built-in
• Volume Clip With Model scripted, bundled in Volume Clip extension
• Volume Clip With Roi scripted, bundled in Volume Clip extension
• Volume Rendering loadable, built-in
• Volumes loadable, built-in
• Voting Binary Hole Filling Image Filter cli, built-in
• Welcome loadable, built-in
• Window Level Effect scripted, bundled in Window Level Effect extension
• Workflow Segmentation loadable, bundled in Perk Tutor extension
• Xnat Slicer scripted, bundled in XNATSlicer extension

Modules by name

156 modules:

Modules by category

30 categories:

• BRAINS
  • Label Statistics
• CMF Registration
  • Voxelbase Registration
• Converters
• Developer Tools
  • DICOM Plugins
  • Editor Extensions
  • Matlab
• Diffusion
  • Diffusion Data Conversion
  • Diffusion Tensor Images
  • Diffusion Weighted Images
  • Tractography
• Editor Effects
• Endoscopy
• Examples
• Exporter
• Filtering
  • Arithmetic
  • Denoising
  • Morphology
• IGT
• Informatics
• Legacy
  • Converters
  • Diffusion
    • Denoising
    • Diffusion Data Conversion
  • Filtering
  • Registration
  • Work in Progress
    • Diffusion Tensor
      • Test
• Mesh Generation
• Mesh Generation
• Microscopy
• Multidimensional data
• Multi Volume Support
• Perk Tutor
• Quantification
  • Change Quantification
• Registration
  • Specialized
• Segmentation
  • Specialized
• Slicelets
• Surface Models
• Testing
  • Test Cases
• Unspecified
• Utilities
  • BRAINS
• Wizards
• Work in Progress
  • Converters
  • Informatics
    • Test Cases
• XNATSlicer

BRAINS

LabelStatistics

• BRAINSLabelStats

CMF Registration

• ApplyMatrix
• LandmarkRegistration
• SurfaceRegistration
• LabelExtraction
• LabelAddition
• Downsize

Voxelbase Registration

• Growing
• MaskCreation
• NonGrowing

Converters

• VectorToScalarVolume
• CropVolume
• CreateDICOMSeries
• OrientScalarVolume

Developer Tools

• EventBroker
• DoubleArrays
• PyDevRemoteDebug
• Cameras
• ExtensionWizard
• ExecutionModelTour
• ImageMaker

DICOM Plugins

• DICOMRWVMPlugin
• DICOMLongitudinalPETCTPlugin
• MultiVolumeImporterPlugin
• DICOMPETSUVPlugin
• DICOMDiffusionVolumePlugin
• DICOMSegmentationPlugin
• DICOMScalarVolumePlugin
• DICOMSlicerDataBundlePlugin

Editor Extensions

• BinaryWatershedEffect
• FastGrowCutEffect
• CarreraSliceEffect
• DoubleThresholdEffect

Matlab

• MatlabModuleGenerator
• MatlabCommander

Diffusion

• TractographyDisplay
• DICOM2FullBrainTractography

Diffusion Data Conversion

• DWIConvert

Diffusion Tensor Images

• ResampleDTIVolume
• DiffusionTensorScalarMeasurements
• TractographyLabelMapSeeding
• TractographyInteractiveSeeding

Diffusion Weighted Images

• DWIRicianLMMSEFilter
• DWIJointRicianLMMSEFilter
• DWIToDTIEstimation
• FinslerBacktracing
• ResampleScalarVectorDWIVolume
• FinslerTractography
• DiffusionWeightedVolumeMasking

Tractography

• FiberBundleToLabelMap
• FiberBundleLabelSelect

Editor Effects

• WindowLevelEffect

Endoscopy

• Endoscopy

Examples

• CarreraSlice
• FastGrowCut
• FastGrowCutSegmenter
• SegmentationAidedRegistration

Exporter

• SlicerToKiwiExporter

Filtering

• ExtractSkeleton
• ThresholdScalarVolume
• N4ITKBiasFieldCorrection
• SimpleFilters
• ImageLabelCombine
• VotingBinaryHoleFillingImageFilter
• HistogramMatching
• CheckerBoardFilter

Arithmetic

• MultiplyScalarVolumes
• AddScalarVolumes
• CastScalarVolume
• SubtractScalarVolumes
• MaskScalarVolume

Denoising

• GradientAnisotropicDiffusion
• MedianImageFilter
• GaussianBlurImageFilter
• CurvatureAnisotropicDiffusion

Morphology

• GrayscaleFillHoleImageFilter
• ErodeLabel
• DilateLabel
• GrayscaleGrindPeakImageFilter

IGT

• PercutaneousApproachAnalysis
• PortPlacement
• OpenIGTLinkIF
• NeedleFinder
• TrackerStabilizer
• GyroGuide
• iGyne
• CornerAnnotation

Informatics

• Annotations
• Markups
• Units
• DICOM
• SampleData
• SubjectHierarchy
• Data
• Colors
• CurveMaker
• TCIABrowser

Legacy

Converters

• BSplineToDeformationField

Diffusion

Denoising

• DWIUnbiasedNonLocalMeansFilter

Diffusion Data Conversion

• DTIimport
• DTIexport

Filtering

• OtsuThresholdImageFilter
• ResampleScalarVolume

Registration

• TestGridTransformRegistration
• ExpertAutomatedRegistration

Work in Progress

Diffusion Tensor

Test

• DiffusionTensorTest

Mesh Generation

• CleaverCLI

MeshGeneration

• BodyCentricCubicMesh
• MeshCompression

Microscopy

• BinShrink
• LabelObjectStatistics
• SpacingAwareCurvatureDiffusion
• IASEMImportSeries
• IASEMImport

Multidimensional data

• MetafileImporter
• SequenceBrowser
• Sequences

MultiVolume Support

• MultiVolumeExplorer
• MultiVolumeImporter

Perk Tutor

• PythonMetricsCalculator
• WorkflowSegmentation
• TransformRecorder
• PerkEvaluator

Quantification

• PETStandardUptakeValueComputation
• SUVFactorCalculator
• SpinalCurvatureMeasurement
• PkModeling
• LabelStatistics
• PETSUVImageMaker
• DiceComputation
• DataProbe

ChangeQuantification

• IntensityDifferenceMetric

Registration

• BRAINSResample
• Transforms
• BRAINSResize
• PerformMetricTest
• BRAINSFit
• PBNRR

Specialized

• ACPCTransform
• FiducialRegistration
• VBRAINSDemonWarp
• BRAINSDemonWarp
• Reformat

Segmentation

• Editor
• EMSegmentQuick
• SimpleRegionGrowingSegmentation
• EMSegment
• VolumeClipWithRoi
• SwissSkullStripper
• AirwaySegmentationCLI
• LAScarSegmenter
• SobolevSegmenter
• VolumeClipWithModel
• IGR3D_MABMIS_Testing
• ABC
• IGR3D_MABMIS_Training
• IntensitySegmenter

Specialized

• EMSegmentCommandLine
• RobustStatisticsSegmenter
• BRAINSROIAuto

Slicelets

• GelDosimetryAnalysisAlgo

Surface Models

• ModelToLabelMap
• MergeModels
• SurfaceToolbox
• ProbeVolumeWithModel
• GrayscaleModelMaker
• LabelMapSmoothing
• ModelMaker

Testing

• SelfTests
• CLIROITest
• CLI4Test
• ThresholdThreadingTest
• ScoliosisMonitoring
• PerformanceTests
• SlicerMRBTest

TestCases

• SliceLinkLogic
• AtlasTests
• RSNAQuantTutorial
• VolumeRenderingSceneClose
• test_tractography_display
• SubjectHierarchyCorePluginsSelfTest
• slicerCloseCrashBug2590
• SubjectHierarchyGenericSelfTest
• Charting
• ScenePerformance
• MarkupsInCompareViewersSelfTest
• fiber_visibility_crash2438
• sceneImport2428
• RSNAVisTutorial
• JRC2013Vis
• RSNA2012ProstateDemo
• AddManyMarkupsFiducialTest
• NeurosurgicalPlanningTutorialMarkupsSelfTest
• ColorsScalarBarSelfTest
• MarkupsInViewsSelfTest
• ChangeTrackerSelfTest
• FiducialLayoutSwitchBug1914
• ViewControllersSliceInterpolationBug1926
• Slicer4Minute
• labelToggleBug2049

Unspecified

• BRAINSDWICleanup

Utilities

• ThingiverseBrowser
• EMSegmentTransformToNewFormat
• DataStore

BRAINS

• BRAINSTransformConvert

Wizards

• CompareVolumes
• ChangeTracker

Work in Progress

• LongitudinalPETCT

Converters

• LabelToDICOMSEGConverter

Informatics

• Reporting

TestCases

• ReportingSelfTest
• LabelToDICOMSEGConverterSelfTest

XNATSlicer

• XnatSlicer

Modules by contributing organization

62 contributing organizations:

• Asclepios INRIA
• AZE R&D
• Brigham and Women's Hospital
• BWH
• BWH, SPL
• BWH, SUMS
• BWH/UAB
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
• CRTC
• gatech
• GE
• Georgia Institute of Technology
• Georgia Tech
• IBM
• Isomics
• Isomics Inc.
• Isomics, Inc.
• Isomics, pieper@isomics.com
• Kitware
• Kitware)
• MGH
• Moka Creative, LLC, kumar.sunil.p@gmail.com
• MSC/NLM
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SAIC-Frederick, NCI-Frederick
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan, SPL
• SNR
• SPL
• SPL B&W Harvard
• SPL, BWH
• SPL, BWH, UPenn
• Stony Brook University
• SUMS
• Surgical Planning Lab
• UAB
• Uiowa
• UIowa
• UNC
• Univ of Michigan
• Univ. of Iowa
• University College Cork
• University of Alabama Birmingham
• University of Heidelberg
• University of Iowa
• University of Iowa) and Andrey Fedorov (SPL
• UPenn
• Utah
• UVa
• UWA
• Wash U-St. Louis, dmarcus@wustl.edu
• while at GE

Asclepios INRIA

• PBNRR cli, bundled in PBNRR extension

AZE R&D

• JRC2013Vis

Brigham and Women's Hospital

• Corner Annotation scripted, bundled in Corner Annotation extension
• Surface Toolbox scripted, built-in
• test tractography display

BWH

• Add Many Markups Fiducial Test
• Change Tracker Self Test
• Colors Scalar Bar Self Test
• Curve Maker scripted, bundled in Curve Maker extension
• Dice Computation loadable, bundled in Dice Computation extension
• DICOMRWVMPlugin
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension
• Fiducial Layout Switch Bug1914
• Markups loadable, built-in
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Neurosurgical Planning Tutorial Markups Self Test
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension
• Volume Rendering Scene Close scripted, built-in
• Window Level Effect scripted, bundled in Window Level Effect extension

BWH, SPL

• Crop Volume loadable, built-in

BWH, SUMS

• Corner Annotation scripted, bundled in Corner Annotation extension

BWH/UAB

• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide scripted, bundled in Gyro Guide extension

CRTC

• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• PBNRR cli, bundled in PBNRR extension

gatech

• Robust Statistics Segmenter cli, built-in

GE

• Add Scalar Volumes cli, built-in
• Charting scripted, built-in
• Checker Board Filter cli, built-in
• Create DICOMSeries cli, built-in
• Curvature Anisotropic Diffusion cli, built-in
• Diffusion Tensor Test cli, built-in
• DWIConvert cli, built-in
• Execution Model Tour cli, built-in
• Gradient Anisotropic Diffusion cli, built-in
• Grayscale Fill Hole Image Filter cli, built-in
• Grayscale Grind Peak Image Filter cli, built-in
• Grayscale Model Maker cli, built-in
• Histogram Matching cli, built-in
• Label Map Smoothing cli, built-in
• Median Image Filter cli, built-in
• Model Maker cli, built-in
• Model To Label Map cli, built-in
• Multiply Scalar Volumes cli, built-in
• Orient Scalar Volume cli, built-in
• Otsu Threshold Image Filter cli, built-in
• Pk Modeling cli, bundled in Pk Modeling extension
• Resample Scalar Volume cli, built-in
• Simple Region Growing Segmentation cli, built-in
• Slice Link Logic scripted, built-in
• Slicer4Minute scripted, built-in
• Spacing Aware Curvature Diffusion cli, bundled in IASEM extension
• Subtract Scalar Volumes cli, built-in
• View Controllers loadable, built-in
• View Controllers Slice Interpolation Bug1926
• Voting Binary Hole Filling Image Filter cli, built-in

Georgia Institute of Technology

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Georgia Tech

• Carrera Slice loadable, bundled in Carrera Slice extension

IBM

• Annotations loadable, built-in

Isomics

• Atlas Tests
• Binary Watershed Effect scripted, bundled in IASEM extension
• Compare Volumes scripted, bundled in CMFreg extension
• Data loadable, built-in
• Data Probe scripted, built-in
• DICOM scripted, built-in
• Editor scripted, built-in
• Endoscopy scripted, built-in
• fiber visibility crash2438
• Fiber Bundle To Label Map scripted, built-in
• Label Statistics scripted, built-in
• label Toggle Bug2049
• Landmark Registration scripted, bundled in CMFreg extension
• Models loadable, built-in
• Performance Tests
• Reporting loadable, bundled in Reporting extension
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data scripted, built-in
• scene Import2428
• Self Tests
• Simple Filters scripted, built-in
• slicer Close Crash Bug2590
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Tractography Interactive Seeding loadable, built-in
• Transforms loadable, built-in
• Vector To Scalar Volume scripted, built-in
• View Controllers loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in

Isomics Inc.

• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Slicer MRBTest
• Threshold Threading Test

Isomics, Inc.

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Isomics, pieper@isomics.com

• Xnat Slicer scripted, bundled in XNATSlicer extension

Kitware

• Cameras loadable, built-in
• Colors loadable, built-in
• Data loadable, built-in
• Data Store loadable, built-in
• Double Arrays loadable, built-in
• Event Broker
• Expert Automated Registration cli, built-in
• Extension Wizard scripted, built-in
• Extract Skeleton cli, built-in
• Fast Grow Cut loadable, bundled in Fast Grow Cut Effect extension
• Fast Grow Cut Segmenter loadable, bundled in Carrera Slice extension
• fiber visibility crash2438
• Fiducial Registration cli, built-in
• Gaussian Blur Image Filter cli, built-in
• Image Maker cli, bundled in Image Maker extension
• label Toggle Bug2049
• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Models loadable, built-in
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• Port Placement scripted, bundled in Port Placement extension
• Reformat loadable, built-in
• Sample Data scripted, built-in
• Scene Performance scripted, built-in
• Simple Filters scripted, built-in
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Threshold Scalar Volume cli, built-in
• Tractography Display loadable, built-in
• Transforms loadable, built-in
• Units loadable, built-in
• View Controllers loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in
• Welcome loadable, built-in

Kitware)

• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

MGH

• Pk Modeling cli, bundled in Pk Modeling extension

Moka Creative, LLC, kumar.sunil.p@gmail.com

• Xnat Slicer scripted, bundled in XNATSlicer extension

MSC/NLM

• Label Object Statistics scripted, bundled in IASEM extension
• Simple Filters scripted, built-in

Noware

• Swiss Skull Stripper cli, bundled in Swiss Skull Stripper extension

Orobix

• Surface Toolbox scripted, built-in

PerkLab at Queen's University

• Py Dev Remote Debug scripted, bundled in Py Dev Remote Debug extension

PerkLab, Queen's

• Metafile Importer loadable, bundled in Multidim Data extension
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension
• Transforms loadable, built-in

PerkLab, Queen's University

• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Volume Clip With Model scripted, bundled in Volume Clip extension

PMH

• Colors Scalar Bar Self Test
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension

Queen's

• Data loadable, built-in
• Gel Dosimetry Analysis Algo loadable, bundled in Gel Dosimetry Analysis extension
• Subject Hierarchy loadable, built-in
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test

Queen's University

• Perk Evaluator loadable, bundled in Perk Tutor extension
• Python Metrics Calculator scripted, bundled in Perk Tutor extension
• Scoliosis Monitoring scripted, bundled in Scoliosis extension
• Spinal Curvature Measurement scripted, bundled in Scoliosis extension
• Transform Recorder loadable, bundled in Perk Tutor extension
• Volume Clip With Roi scripted, bundled in Volume Clip extension
• Workflow Segmentation loadable, bundled in Perk Tutor extension

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension

SAIC-Frederick, NCI-Frederick

• Volume Rendering loadable, built-in

SBU

• LAScar Segmenter cli, bundled in LAScar Segmenter extension

SCI Institute

• Cleaver CLI cli, bundled in Cleaver Extension extension

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension

SNR

• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension

SPL

• DICOM2Full Brain Tractography scripted, built-in
• Label To DICOMSEGConverter Self Test
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension
• Pk Modeling cli, bundled in Pk Modeling extension
• Reporting Self Test
• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension

SPL B&W Harvard

• PBNRR cli, bundled in PBNRR extension

SPL, BWH

• ACPCTransform cli, built-in
• Annotations loadable, built-in
• BSpline To Deformation Field cli, built-in
• Cast Scalar Volume cli, built-in
• Colors loadable, built-in
• Data loadable, built-in
• Diffusion Tensor Scalar Measurements cli, built-in
• Diffusion Weighted Volume Masking cli, built-in
• DTIexport cli, built-in
• DTIimport cli, built-in
• DWITo DTIEstimation cli, built-in
• Fiducial Registration cli, built-in
• Grayscale Model Maker cli, built-in
• Image Label Combine cli, built-in
• Mask Scalar Volume cli, built-in
• Merge Models cli, built-in
• Model Maker cli, built-in
• Models loadable, built-in
• Model To Label Map cli, built-in
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• N4ITKBias Field Correction cli, built-in
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Probe Volume With Model cli, built-in
• Reporting loadable, bundled in Reporting extension
• Robust Statistics Segmenter cli, built-in
• Scene Views loadable, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• TCIABrowser scripted, bundled in TCIABrowser extension
• Test Grid Transform Registration cli, built-in
• Threshold Scalar Volume cli, built-in
• Tractography Label Map Seeding cli, built-in
• View Controllers loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in
• Welcome loadable, built-in

SPL, BWH, UPenn

• Merge Models cli, built-in

Stony Brook University

• Carrera Slice Effect scripted, bundled in Carrera Slice extension
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension

SUMS

• Corner Annotation scripted, bundled in Corner Annotation extension

Surgical Planning Lab

• Label To DICOMSEGConverter scripted, bundled in Reporting extension

UAB

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension
• Sobolev Segmenter cli, bundled in Sobolev Segmenter extension

Uiowa

• DWIConvert cli, built-in

UIowa

• DWIConvert cli, built-in

UNC

• DWIRician LMMSEFilter cli, built-in
• Extract Skeleton cli, built-in
• Intensity Segmenter cli, bundled in Intensity Segmenter extension
• Port Placement scripted, bundled in Port Placement extension
• Resample DTIVolume cli, built-in
• Resample Scalar Vector DWIVolume cli, built-in

Univ of Michigan

• Surface Registration scripted, bundled in CMFreg extension

Univ. of Iowa

• DICOMPETSUVPlugin
• DICOMRWVMPlugin

University College Cork

• Airway Segmentation CLI cli, bundled in Airway Segmentation extension

University of Alabama Birmingham

• Carrera Slice Effect scripted, bundled in Carrera Slice extension
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension

University of Heidelberg

• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension

University of Iowa

• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension

University of Iowa) and Andrey Fedorov (SPL

• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension

UPenn

• Annotations loadable, built-in
• EMSegment loadable, built-in
• N4ITKBias Field Correction cli, built-in
• Scene Views loadable, built-in

Utah

• Label Map Smoothing cli, built-in
• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

UVa

• DWIJoint Rician LMMSEFilter cli, built-in
• DWIRician LMMSEFilter cli, built-in
• DWIUnbiased Non Local Means Filter cli, built-in

UWA

• Thingiverse Browser scripted, bundled in Thingiverse Browser extension

WashU-St. Louis, dmarcus@wustl.edu

• Xnat Slicer scripted, bundled in XNATSlicer extension

while at GE

• Pk Modeling cli, bundled in Pk Modeling extension

Modules by contributing organization

62 contributing organizations:

• Asclepios INRIA
• AZE R&D
• Brigham and Women's Hospital
• BWH
• BWH, SPL
• BWH, SUMS
• BWH/UAB
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
• CRTC
• gatech
• GE
• Georgia Institute of Technology
• Georgia Tech
• IBM
• Isomics
• Isomics Inc.
• Isomics, Inc.
• Isomics, pieper@isomics.com
• Kitware
• Kitware)
• MGH
• Moka Creative, LLC, kumar.sunil.p@gmail.com
• MSC/NLM
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SAIC-Frederick, NCI-Frederick
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan, SPL
• SNR
• SPL
• SPL B&W Harvard
• SPL, BWH
• SPL, BWH, UPenn
• Stony Brook University
• SUMS
• Surgical Planning Lab
• UAB
• Uiowa
• UIowa
• UNC
• Univ of Michigan
• Univ. of Iowa
• University College Cork
• University of Alabama Birmingham
• University of Heidelberg
• University of Iowa
• University of Iowa) and Andrey Fedorov (SPL
• UPenn
• Utah
• UVa
• UWA
• Wash U-St. Louis, dmarcus@wustl.edu
• while at GE

Modules by contributing individual

163 contributing individuals:

• Alex Yarmarkovich
• Ali Ghayoor
• Allen Tannenbaum
• and Hans Johnson.
• Beatriz Paniagua from Department of Orthodontics
• Brad Davis
• BWH
• Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
• Daniel Haehn
• Demian Wassermann
• Dinggang Shen
• Francois Budin
• Greg Harris
• hans-johnson -at- uiowa.edu
• http://www.psychiatry.uiowa.edu
• Ivan Kolesov
• Kilian Pohl
• Lauren O'Donnell
• Liangjia Zhu
• Luping Fang
• Matt Lougheed
• Neuro Image Resarch and Analysis Laboratory
• Patricio Vela
• Peter Karasev
• Peter Savadjiev
• Polina Golland
• Qing Pan
• the University of North Carolina at Chapel Hill
• UNC Medical School
• Uof M School of Dentistry
• Uof M School Of Dentistry
• Xiaofeng Liu
• Yumin Yuan
• Akila Viswanathan
• Alan Morris
• Alex Yarmakovich
• Alex Yarmarkovich
• Ali Ghayoor
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• and Steve Pieper
• Andinet Enquobahrie
• Andras Lasso
• Andreas Freudling
• Andrey Fedorov
• Andriy Kot
• Anonymous
• Antonio Damato
• Antonio Tristan Vega
• Arie Nakhmani
• Atsushi Yamada
• Benjamin Long
• Bill Lorensen
• Bradley Lowekamp
• Bradley Lowekamp and Bill Lorensen
• Casey B Goodlett
• Charles Marion
• Csaba Pinter
• Dan Marcus
• Daniel Blezek
• Daniel Haehn
• Danny Perry
• Demian Wassermann
• Dirk Padfield
• Dominik Meier
• Ethan Ulrich
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Guido Gerig
• Guillaume Pernelle
• Hans J. Johnson
• Hans Johnson
• Ivan Kolesov
• Jan Egger
• Jayender Jagadeesan
• Jean-Baptiste Berger
• Jean-Christophe Fillion-Robin
• Jim Miller
• Johan Andruejol
• John Evans
• Jonathan Bronson
• Josh Cates
• Joy Matsui
• Julien Finet
• Julien Jomier
• Junichi Tokuda
• Kent Williams
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Lauren Barber
• Lauren O'Donnell
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Marc Niethammer
• Marcel Prastawa prastawa@sci.utah.edu
• Mark Scully
• Markus Van Tol
• Martin Styner
• Matthew Holden
• Matthew S. Holden
• Matthew Woehlke
• Michael Jeulin-Lagarrigue
• Minjeong Kim
• Nabgha Fahrat
• Nicholas Herlambang
• Nick Tustison
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pierre Seroul
• Pietro Nardelli
• Raul San Jose
• Rob Mac Leod
• Ron Kikinis
• Ross Whitaker
• Ruifeng Chen
• Sam Song
• Sandy Wells
• Santiago Aja Fernandez
• Sebastien Barré
• Sebastien Barre
• Shigeyuki Naka
• Soichiro Tani
• Sonia Pujol
• Stephen Aylward
• Stephen R Aylward
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• This tool was developed by Hans J. Johnson and Greg Harris.
• This tool was developed by Hans Johnson.
• This tool was developed by Kent Williams.
• This tool was developed by Vincent Magnotta
• Tina Kapur
• Tobias Penzkofer
• Tohru Tani
• Vince Magnotta
• Vincent A. Magnotta
• Vinicius Boen
• Vinicius Boen and Mason Winsauer
• Wendy Plesniak
• Xiaodong Tao
• Xiaojun Chen
• Yanling Liu
• Yi Gao
• Yinglin Lee
• Yingxuan Zhu
• Yixun Liu
• Yong Zhang

Alex Yarmarkovich

• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

Ali Ghayoor

• BRAINSTransform Convert cli, built-in

Allen Tannenbaum

• Carrera Slice Effect scripted, bundled in Carrera Slice extension
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension

and Hans Johnson.

• BRAINSResample cli, built-in

Beatriz Paniagua from Department of Orthodontics

• Intensity Segmenter cli, bundled in Intensity Segmenter extension

Brad Davis

• EMSegment Command Line cli, built-in

BWH

• DICOMSegmentation Plugin
• Multi Volume Importer Plugin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

Daniel Haehn

• EMSegment Command Line cli, built-in

Demian Wassermann

• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

Dinggang Shen

• IGR3D MABMIS Testing cli, bundled in MABMIS extension
• IGR3D MABMIS Training cli, bundled in MABMIS extension

Francois Budin

• Intensity Segmenter cli, bundled in Intensity Segmenter extension

Greg Harris

• BRAINSResample cli, built-in

hans-johnson -at- uiowa.edu

• BRAINSFit cli, built-in
• BRAINSROIAuto cli, built-in

http://www.psychiatry.uiowa.edu

• BRAINSFit cli, built-in
• BRAINSROIAuto cli, built-in

Ivan Kolesov

• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension

Kilian Pohl

• EMSegment loadable, built-in
• EMSegment Command Line cli, built-in

Lauren O'Donnell

• Fiber Bundle Label Select cli, built-in

Liangjia Zhu

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Luping Fang

• Gyro Guide scripted, bundled in Gyro Guide extension

Matt Lougheed

• Volume Clip With Model scripted, bundled in Volume Clip extension

Neuro Image Resarch and Analysis Laboratory

• Apply Matrix cli, bundled in CMFreg extension
• Downsize cli, bundled in CMFreg extension
• Growing cli, bundled in CMFreg extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Mask Creation cli, bundled in CMFreg extension
• Non Growing cli, bundled in CMFreg extension

Patricio Vela

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Peter Karasev

• Carrera Slice loadable, bundled in Carrera Slice extension

Peter Savadjiev

• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

Polina Golland

• EMSegment Command Line cli, built-in

Qing Pan

• Gyro Guide scripted, bundled in Gyro Guide extension

the University of North Carolina at Chapel Hill

• Intensity Segmenter cli, bundled in Intensity Segmenter extension

UNC Medical School

• Apply Matrix cli, bundled in CMFreg extension
• Downsize cli, bundled in CMFreg extension
• Growing cli, bundled in CMFreg extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Mask Creation cli, bundled in CMFreg extension
• Non Growing cli, bundled in CMFreg extension

UofM School of Dentistry

• Apply Matrix cli, bundled in CMFreg extension
• Downsize cli, bundled in CMFreg extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Mask Creation cli, bundled in CMFreg extension
• Non Growing cli, bundled in CMFreg extension

UofM School Of Dentistry

• Growing cli, bundled in CMFreg extension

Xiaofeng Liu

• IGR3D MABMIS Testing cli, bundled in MABMIS extension
• IGR3D MABMIS Training cli, bundled in MABMIS extension

Yumin Yuan

• EMSegment Command Line cli, built-in

Akila Viswanathan

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Alan Morris

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Alex Yarmakovich

• Models loadable, built-in
• Tractography Interactive Seeding loadable, built-in

Alex Yarmarkovich

• Data loadable, built-in
• Image Label Combine cli, built-in
• Transforms loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in

Ali Ghayoor

• Perform Metric Test cli, built-in

Alireza Mehrtash

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension
• TCIABrowser scripted, bundled in TCIABrowser extension

Allen Tannenbaum

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Robust Statistics Segmenter cli, built-in
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension
• Sobolev Segmenter cli, bundled in Sobolev Segmenter extension

and Ron Kikinis

• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension

and Steve Pieper

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Andinet Enquobahrie

• Port Placement scripted, bundled in Port Placement extension

Andras Lasso

• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Metafile Importer loadable, bundled in Multidim Data extension
• Py Dev Remote Debug scripted, bundled in Py Dev Remote Debug extension
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension
• Transforms loadable, built-in
• Volume Clip With Model scripted, bundled in Volume Clip extension
• Volume Clip With Roi scripted, bundled in Volume Clip extension

Andreas Freudling

• Volume Rendering loadable, built-in

Andrey Fedorov

• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• BSpline To Deformation Field cli, built-in
• Change Tracker scripted, bundled in Change Tracker extension
• Change Tracker Self Test
• Crop Volume loadable, built-in
• DICOMRWVMPlugin
• DICOMSegmentation Plugin
• Intensity Difference Metric cli, bundled in Change Tracker extension
• Label To DICOMSEGConverter scripted, bundled in Reporting extension
• Label To DICOMSEGConverter Self Test
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• Multi Volume Importer Plugin
• N4ITKBias Field Correction cli, built-in
• PBNRR cli, bundled in PBNRR extension
• Pk Modeling cli, bundled in Pk Modeling extension
• Reporting loadable, bundled in Reporting extension
• Reporting Self Test
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• TCIABrowser scripted, bundled in TCIABrowser extension
• Window Level Effect scripted, bundled in Window Level Effect extension

Andriy Kot

• PBNRR cli, bundled in PBNRR extension

Anonymous

• CLIROITest cli, built-in
• EMSegment Transform To New Format cli, built-in

Antonio Damato

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Antonio Tristan Vega

• DWIJoint Rician LMMSEFilter cli, built-in
• DWIRician LMMSEFilter cli, built-in
• DWIUnbiased Non Local Means Filter cli, built-in
• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension

Arie Nakhmani

• Sobolev Segmenter cli, bundled in Sobolev Segmenter extension

Atsushi Yamada

• Corner Annotation scripted, bundled in Corner Annotation extension

Benjamin Long

• Sample Data scripted, built-in

Bill Lorensen

• Add Scalar Volumes cli, built-in
• Checker Board Filter cli, built-in
• Create DICOMSeries cli, built-in
• Curvature Anisotropic Diffusion cli, built-in
• Diffusion Tensor Test cli, built-in
• Execution Model Tour cli, built-in
• Gradient Anisotropic Diffusion cli, built-in
• Grayscale Fill Hole Image Filter cli, built-in
• Grayscale Grind Peak Image Filter cli, built-in
• Grayscale Model Maker cli, built-in
• Histogram Matching cli, built-in
• Median Image Filter cli, built-in
• Model Maker cli, built-in
• Multiply Scalar Volumes cli, built-in
• Orient Scalar Volume cli, built-in
• Otsu Threshold Image Filter cli, built-in
• Resample Scalar Volume cli, built-in
• Subtract Scalar Volumes cli, built-in
• Swiss Skull Stripper cli, bundled in Swiss Skull Stripper extension
• Voting Binary Hole Filling Image Filter cli, built-in

Bradley Lowekamp

• Bin Shrink cli, bundled in IASEM extension
• Double Threshold Effect scripted, bundled in IASEM extension
• IASEMImport cli, bundled in IASEM extension
• IASEMImport Series cli, bundled in IASEM extension
• Label Object Statistics scripted, bundled in IASEM extension
• Simple Filters scripted, built-in

Bradley Lowekamp and Bill Lorensen

• Spacing Aware Curvature Diffusion cli, bundled in IASEM extension

Casey B Goodlett

• Expert Automated Registration cli, built-in
• Fiducial Registration cli, built-in

Charles Marion

• Data Store loadable, built-in

Csaba Pinter

• Data loadable, built-in
• Gel Dosimetry Analysis Algo loadable, bundled in Gel Dosimetry Analysis extension
• Subject Hierarchy loadable, built-in
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test

Dan Marcus

• Xnat Slicer scripted, bundled in XNATSlicer extension

Daniel Blezek

• Execution Model Tour cli, built-in

Daniel Haehn

• Annotations loadable, built-in
• EMSegment loadable, built-in
• Merge Models cli, built-in
• Scene Views loadable, built-in

Danny Perry

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Demian Wassermann

• DICOM2Full Brain Tractography scripted, built-in
• Diffusion Weighted Volume Masking cli, built-in
• Fiber Bundle Label Select cli, built-in
• test tractography display
• Tractography Label Map Seeding cli, built-in

Dirk Padfield

• Label Map Smoothing cli, built-in

Dominik Meier

• Fiducial Registration cli, built-in

Ethan Ulrich

• DICOMPETSUVPlugin
• DICOMRWVMPlugin
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension

Fotis Drakopoulos

• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• PBNRR cli, bundled in PBNRR extension

Francois Budin

• Resample DTIVolume cli, built-in
• Resample Scalar Vector DWIVolume cli, built-in

Franklin King

• Scoliosis Monitoring scripted, bundled in Scoliosis extension
• Spinal Curvature Measurement scripted, bundled in Scoliosis extension
• Transforms loadable, built-in

Greg Gardner

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Guido Gerig

• Extract Skeleton cli, built-in

Guillaume Pernelle

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Hans J. Johnson

• BRAINSFit cli, built-in
• BRAINSROIAuto cli, built-in
• BRAINSTransform Convert cli, built-in

Hans Johnson

• DWIConvert cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension

Ivan Kolesov

• Carrera Slice loadable, bundled in Carrera Slice extension
• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Jan Egger

• i Gyne scripted, bundled in i Gyne extension

Jayender Jagadeesan

• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension

Jean-Baptiste Berger

• Data Store loadable, built-in

Jean-Christophe Fillion-Robin

• CLI4Test
• Data Store loadable, built-in
• Fast Grow Cut loadable, bundled in Fast Grow Cut Effect extension
• Fast Grow Cut Segmenter loadable, bundled in Carrera Slice extension
• fiber visibility crash2438
• label Toggle Bug2049
• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• Sample Data scripted, built-in
• Simple Filters scripted, built-in
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Transforms loadable, built-in
• View Controllers loadable, built-in
• Welcome loadable, built-in

Jim Miller

• Charting scripted, built-in
• Pk Modeling cli, bundled in Pk Modeling extension
• Simple Region Growing Segmentation cli, built-in
• Slice Link Logic scripted, built-in
• Slicer4Minute scripted, built-in
• View Controllers loadable, built-in
• View Controllers Slice Interpolation Bug1926

Johan Andruejol

• Units loadable, built-in

John Evans

• Pk Modeling cli, bundled in Pk Modeling extension

Jonathan Bronson

• Cleaver CLI cli, bundled in Cleaver Extension extension

Josh Cates

• Label Map Smoothing cli, built-in
• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Joy Matsui

• DWIConvert cli, built-in

Julien Finet

• Cameras loadable, built-in
• Colors loadable, built-in
• Data loadable, built-in
• Double Arrays loadable, built-in
• Event Broker
• Image Maker cli, bundled in Image Maker extension
• Models loadable, built-in
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• Scene Performance scripted, built-in
• Threshold Scalar Volume cli, built-in
• Tractography Display loadable, built-in
• Transforms loadable, built-in
• Units loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in

Julien Jomier

• Gaussian Blur Image Filter cli, built-in

Junichi Tokuda

• Corner Annotation scripted, bundled in Corner Annotation extension
• Curve Maker scripted, bundled in Curve Maker extension
• Dilate Label cli, bundled in Erode Dilate Label extension
• Erode Label cli, bundled in Erode Dilate Label extension
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension

Kent Williams

• BRAINSTransform Convert cli, built-in
• DWIConvert cli, built-in

Kevin Wang

• Colors Scalar Bar Self Test
• Matlab Commander cli, bundled in Matlab Bridge extension
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension

Kilian Pohl

• Annotations loadable, built-in
• Change Tracker scripted, bundled in Change Tracker extension
• Scene Views loadable, built-in

Koichiro Murakami

• Corner Annotation scripted, bundled in Corner Annotation extension
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension

Lauren Barber

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Lauren O'Donnell

• Probe Volume With Model cli, built-in

Laurent Chauvin

• Curve Maker scripted, bundled in Curve Maker extension
• Dice Computation loadable, bundled in Dice Computation extension
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension
• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension

Liang-Jia Zhu

• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Liangjia Zhu

• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension
• LAScar Segmenter cli, bundled in LAScar Segmenter extension

Luca Antiga

• Surface Toolbox scripted, built-in

Luis G. Torres

• Port Placement scripted, bundled in Port Placement extension

Marc Niethammer

• DWIRician LMMSEFilter cli, built-in

Marcel Prastawa prastawa@sci.utah.edu

• ABC cli, bundled in ABC extension

Mark Scully

• DWIConvert cli, built-in

Markus Van Tol

• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension

Martin Styner

• Extract Skeleton cli, built-in

Matthew Holden

• Metafile Importer loadable, bundled in Multidim Data extension
• Python Metrics Calculator scripted, bundled in Perk Tutor extension
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension

Matthew S. Holden

• Perk Evaluator loadable, bundled in Perk Tutor extension
• Transform Recorder loadable, bundled in Perk Tutor extension
• Workflow Segmentation loadable, bundled in Perk Tutor extension

Matthew Woehlke

• Extension Wizard scripted, built-in

Michael Jeulin-Lagarrigue

• Reformat loadable, built-in

Minjeong Kim

• IGR3D MABMIS Testing cli, bundled in MABMIS extension
• IGR3D MABMIS Training cli, bundled in MABMIS extension

Nabgha Fahrat

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Nicholas Herlambang

• JRC2013Vis

Nick Tustison

• N4ITKBias Field Correction cli, built-in

Nicole Aucoin

• ACPCTransform cli, built-in
• Add Many Markups Fiducial Test
• Annotations loadable, built-in
• Cast Scalar Volume cli, built-in
• Colors loadable, built-in
• Colors Scalar Bar Self Test
• Data loadable, built-in
• Fiducial Layout Switch Bug1914
• Grayscale Model Maker cli, built-in
• Markups loadable, built-in
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Mask Scalar Volume cli, built-in
• Merge Models cli, built-in
• Model Maker cli, built-in
• Models loadable, built-in
• Model To Label Map cli, built-in
• Neurosurgical Planning Tutorial Markups Self Test
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Reporting loadable, bundled in Reporting extension
• Scene Views loadable, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• Threshold Scalar Volume cli, built-in
• Volume Rendering Scene Close scripted, built-in
• Volumes loadable, built-in

Nigel Goh

• Thingiverse Browser scripted, bundled in Thingiverse Browser extension

Nikos Chrisochoides

• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• PBNRR cli, bundled in PBNRR extension

Olivier Clatz

• PBNRR cli, bundled in PBNRR extension

Pat Marion

• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension

Paul Mercea

• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension

Pengdong Xiao

• Intensity Segmenter cli, bundled in Intensity Segmenter extension

Peter Black

• Change Tracker scripted, bundled in Change Tracker extension

Peter Karasev

• Carrera Slice Effect scripted, bundled in Carrera Slice extension

Pierre Seroul

• Extract Skeleton cli, built-in

Pietro Nardelli

• Airway Segmentation CLI cli, bundled in Airway Segmentation extension

Raul San Jose

• Diffusion Tensor Scalar Measurements cli, built-in
• DWITo DTIEstimation cli, built-in
• Tractography Label Map Seeding cli, built-in

Rob MacLeod

• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Ron Kikinis

• ACPCTransform cli, built-in
• Cast Scalar Volume cli, built-in
• Change Tracker scripted, bundled in Change Tracker extension
• Crop Volume loadable, built-in
• Mask Scalar Volume cli, built-in
• Merge Models cli, built-in
• Model Maker cli, built-in
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• N4ITKBias Field Correction cli, built-in
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Robust Statistics Segmenter cli, built-in
• Surface Toolbox scripted, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• Threshold Scalar Volume cli, built-in
• View Controllers loadable, built-in
• Volume Rendering loadable, built-in

Ross Whitaker

• Label Map Smoothing cli, built-in

Ruifeng Chen

• Gyro Guide scripted, bundled in Gyro Guide extension

Sam Song

• i Gyne scripted, bundled in i Gyne extension

Sandy Wells

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Santiago Aja Fernandez

• DWIJoint Rician LMMSEFilter cli, built-in
• DWIRician LMMSEFilter cli, built-in
• DWIUnbiased Non Local Means Filter cli, built-in

Sebastien Barré

• Cameras loadable, built-in

Sebastien Barre

• EMSegment Command Line cli, built-in

Shigeyuki Naka

• Corner Annotation scripted, bundled in Corner Annotation extension

Soichiro Tani

• Corner Annotation scripted, bundled in Corner Annotation extension

Sonia Pujol

• Dice Computation loadable, bundled in Dice Computation extension
• DTIexport cli, built-in
• DTIimport cli, built-in

Stephen Aylward

• Extract Skeleton cli, built-in
• Gaussian Blur Image Filter cli, built-in

Stephen R Aylward

• Expert Automated Registration cli, built-in

Steve Pieper

• Atlas Tests
• Binary Watershed Effect scripted, bundled in IASEM extension
• Compare Volumes scripted, bundled in CMFreg extension
• Data Probe scripted, built-in
• DICOM scripted, built-in
• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Editor scripted, built-in
• Endoscopy scripted, built-in
• fiber visibility crash2438
• Fiber Bundle To Label Map scripted, built-in
• Label Statistics scripted, built-in
• label Toggle Bug2049
• Landmark Registration scripted, bundled in CMFreg extension
• Multi Volume Explorer loadable, built-in
• Multi Volume Importer scripted, built-in
• Performance Tests
• Reporting loadable, bundled in Reporting extension
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data scripted, built-in
• scene Import2428
• Self Tests
• Simple Filters scripted, built-in
• slicer Close Crash Bug2590
• Slicer MRBTest
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Threshold Threading Test
• Vector To Scalar Volume scripted, built-in
• View Controllers loadable, built-in
• Volumes loadable, built-in
• Xnat Slicer scripted, bundled in XNATSlicer extension

Sunil Kumar

• Xnat Slicer scripted, bundled in XNATSlicer extension

Sylvain Bouix

• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Tamas Ungi

• Perk Evaluator loadable, bundled in Perk Tutor extension
• Python Metrics Calculator scripted, bundled in Perk Tutor extension
• Scoliosis Monitoring scripted, bundled in Scoliosis extension
• Spinal Curvature Measurement scripted, bundled in Scoliosis extension
• Transform Recorder loadable, bundled in Perk Tutor extension
• Workflow Segmentation loadable, bundled in Perk Tutor extension

This tool was developed by Hans J. Johnson and Greg Harris.

• BRAINSDemon Warp cli, built-in
• VBRAINSDemon Warp cli, built-in

This tool was developed by Hans Johnson.

• BRAINSResize cli, built-in

This tool was developed by Kent Williams.

• BRAINSDWICleanup cli, built-in

This tool was developed by Vincent Magnotta

• BRAINSResample cli, built-in

Tina Kapur

• i Gyne scripted, bundled in i Gyne extension
• Needle Finder scripted, bundled in Needle Finder extension

Tobias Penzkofer

• i Gyne scripted, bundled in i Gyne extension

Tohru Tani

• Corner Annotation scripted, bundled in Corner Annotation extension

Vince Magnotta

• DWIConvert cli, built-in

Vincent A. Magnotta

• BRAINSLabel Stats cli, built-in

Vinicius Boen

• Surface Registration scripted, bundled in CMFreg extension

Vinicius Boen and Mason Winsauer

• Apply Matrix cli, bundled in CMFreg extension
• Downsize cli, bundled in CMFreg extension
• Growing cli, bundled in CMFreg extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Mask Creation cli, bundled in CMFreg extension
• Non Growing cli, bundled in CMFreg extension

Wendy Plesniak

• Annotations loadable, built-in
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Scene Views loadable, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• View Controllers loadable, built-in
• Welcome loadable, built-in

Xiaodong Tao

• DWIConvert cli, built-in
• Model To Label Map cli, built-in

Xiaojun Chen

• i Gyne scripted, bundled in i Gyne extension

Yanling Liu

• Volume Rendering loadable, built-in

Yi Gao

• Carrera Slice Effect scripted, bundled in Carrera Slice extension
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension
• i Gyne scripted, bundled in i Gyne extension
• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Needle Finder scripted, bundled in Needle Finder extension
• Robust Statistics Segmenter cli, built-in
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension

Yinglin Lee

• Test Grid Transform Registration cli, built-in

Yingxuan Zhu

• Pk Modeling cli, bundled in Pk Modeling extension

Yixun Liu

• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• PBNRR cli, bundled in PBNRR extension

Yong Zhang

• Annotations loadable, built-in

Modules by contributing individual

163 contributing individuals:

• Alex Yarmarkovich
• Ali Ghayoor
• Allen Tannenbaum
• and Hans Johnson.
• Beatriz Paniagua from Department of Orthodontics
• Brad Davis
• BWH
• Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
• Daniel Haehn
• Demian Wassermann
• Dinggang Shen
• Francois Budin
• Greg Harris
• hans-johnson -at- uiowa.edu
• http://www.psychiatry.uiowa.edu
• Ivan Kolesov
• Kilian Pohl
• Lauren O'Donnell
• Liangjia Zhu
• Luping Fang
• Matt Lougheed
• Neuro Image Resarch and Analysis Laboratory
• Patricio Vela
• Peter Karasev
• Peter Savadjiev
• Polina Golland
• Qing Pan
• the University of North Carolina at Chapel Hill
• UNC Medical School
• Uof M School of Dentistry
• Uof M School Of Dentistry
• Xiaofeng Liu
• Yumin Yuan
• Akila Viswanathan
• Alan Morris
• Alex Yarmakovich
• Alex Yarmarkovich
• Ali Ghayoor
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• and Steve Pieper
• Andinet Enquobahrie
• Andras Lasso
• Andreas Freudling
• Andrey Fedorov
• Andriy Kot
• Anonymous
• Antonio Damato
• Antonio Tristan Vega
• Arie Nakhmani
• Atsushi Yamada
• Benjamin Long
• Bill Lorensen
• Bradley Lowekamp
• Bradley Lowekamp and Bill Lorensen
• Casey B Goodlett
• Charles Marion
• Csaba Pinter
• Dan Marcus
• Daniel Blezek
• Daniel Haehn
• Danny Perry
• Demian Wassermann
• Dirk Padfield
• Dominik Meier
• Ethan Ulrich
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Guido Gerig
• Guillaume Pernelle
• Hans J. Johnson
• Hans Johnson
• Ivan Kolesov
• Jan Egger
• Jayender Jagadeesan
• Jean-Baptiste Berger
• Jean-Christophe Fillion-Robin
• Jim Miller
• Johan Andruejol
• John Evans
• Jonathan Bronson
• Josh Cates
• Joy Matsui
• Julien Finet
• Julien Jomier
• Junichi Tokuda
• Kent Williams
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Lauren Barber
• Lauren O'Donnell
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Marc Niethammer
• Marcel Prastawa prastawa@sci.utah.edu
• Mark Scully
• Markus Van Tol
• Martin Styner
• Matthew Holden
• Matthew S. Holden
• Matthew Woehlke
• Michael Jeulin-Lagarrigue
• Minjeong Kim
• Nabgha Fahrat
• Nicholas Herlambang
• Nick Tustison
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pierre Seroul
• Pietro Nardelli
• Raul San Jose
• Rob Mac Leod
• Ron Kikinis
• Ross Whitaker
• Ruifeng Chen
• Sam Song
• Sandy Wells
• Santiago Aja Fernandez
• Sebastien Barré
• Sebastien Barre
• Shigeyuki Naka
• Soichiro Tani
• Sonia Pujol
• Stephen Aylward
• Stephen R Aylward
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• This tool was developed by Hans J. Johnson and Greg Harris.
• This tool was developed by Hans Johnson.
• This tool was developed by Kent Williams.
• This tool was developed by Vincent Magnotta
• Tina Kapur
• Tobias Penzkofer
• Tohru Tani
• Vince Magnotta
• Vincent A. Magnotta
• Vinicius Boen
• Vinicius Boen and Mason Winsauer
• Wendy Plesniak
• Xiaodong Tao
• Xiaojun Chen
• Yanling Liu
• Yi Gao
• Yinglin Lee
• Yingxuan Zhu
• Yixun Liu
• Yong Zhang

Modules by type

3 types:

• cli
• loadable
• scripted

cli

• ABC cli, bundled in ABC extension
• ACPCTransform cli, built-in
• Add Scalar Volumes cli, built-in
• Airway Segmentation CLI cli, bundled in Airway Segmentation extension
• Apply Matrix cli, bundled in CMFreg extension
• Bin Shrink cli, bundled in IASEM extension
• Body Centric Cubic Mesh cli, bundled in CBC 3D I2MConversion extension
• BRAINSDemon Warp cli, built-in
• BRAINSDWICleanup cli, built-in
• BRAINSFit cli, built-in
• BRAINSLabel Stats cli, built-in
• BRAINSResample cli, built-in
• BRAINSResize cli, built-in
• BRAINSROIAuto cli, built-in
• BRAINSTransform Convert cli, built-in
• BSpline To Deformation Field cli, built-in
• Cast Scalar Volume cli, built-in
• Checker Board Filter cli, built-in
• Cleaver CLI cli, bundled in Cleaver Extension extension
• CLIROITest cli, built-in
• Create DICOMSeries cli, built-in
• Curvature Anisotropic Diffusion cli, built-in
• Diffusion Tensor Scalar Measurements cli, built-in
• Diffusion Tensor Test cli, built-in
• Diffusion Weighted Volume Masking cli, built-in
• Dilate Label cli, bundled in Erode Dilate Label extension
• Downsize cli, bundled in CMFreg extension
• DTIexport cli, built-in
• DTIimport cli, built-in
• DWIConvert cli, built-in
• DWIJoint Rician LMMSEFilter cli, built-in
• DWIRician LMMSEFilter cli, built-in
• DWITo DTIEstimation cli, built-in
• DWIUnbiased Non Local Means Filter cli, built-in
• EMSegment Command Line cli, built-in
• EMSegment Transform To New Format cli, built-in
• Erode Label cli, bundled in Erode Dilate Label extension
• Execution Model Tour cli, built-in
• Expert Automated Registration cli, built-in
• Extract Skeleton cli, built-in
• Fiber Bundle Label Select cli, built-in
• Fiducial Registration cli, built-in
• Finsler Backtracing cli, bundled in Finsler Tractography extension
• Finsler Tractography cli, bundled in Finsler Tractography extension
• Gaussian Blur Image Filter cli, built-in
• Gradient Anisotropic Diffusion cli, built-in
• Grayscale Fill Hole Image Filter cli, built-in
• Grayscale Grind Peak Image Filter cli, built-in
• Grayscale Model Maker cli, built-in
• Growing cli, bundled in CMFreg extension
• Histogram Matching cli, built-in
• IASEMImport cli, bundled in IASEM extension
• IASEMImport Series cli, bundled in IASEM extension
• IGR3D MABMIS Testing cli, bundled in MABMIS extension
• IGR3D MABMIS Training cli, bundled in MABMIS extension
• Image Label Combine cli, built-in
• Image Maker cli, bundled in Image Maker extension
• Intensity Difference Metric cli, bundled in Change Tracker extension
• Intensity Segmenter cli, bundled in Intensity Segmenter extension
• Label Addition cli, bundled in CMFreg extension
• Label Extraction cli, bundled in CMFreg extension
• Label Map Smoothing cli, built-in
• LAScar Segmenter cli, bundled in LAScar Segmenter extension
• Mask Creation cli, bundled in CMFreg extension
• Mask Scalar Volume cli, built-in
• Matlab Commander cli, bundled in Matlab Bridge extension
• Median Image Filter cli, built-in
• Merge Models cli, built-in
• Mesh Compression cli, bundled in CBC 3D I2MConversion extension
• Model Maker cli, built-in
• Model To Label Map cli, built-in
• Multiply Scalar Volumes cli, built-in
• N4ITKBias Field Correction cli, built-in
• Non Growing cli, bundled in CMFreg extension
• Orient Scalar Volume cli, built-in
• Otsu Threshold Image Filter cli, built-in
• PBNRR cli, bundled in PBNRR extension
• Perform Metric Test cli, built-in
• PETStandard Uptake Value Computation cli, built-in
• PETSUVImage Maker cli, bundled in Longitudinal PETCT extension
• Pk Modeling cli, bundled in Pk Modeling extension
• Probe Volume With Model cli, built-in
• Resample DTIVolume cli, built-in
• Resample Scalar Vector DWIVolume cli, built-in
• Resample Scalar Volume cli, built-in
• Robust Statistics Segmenter cli, built-in
• Segmentation Aided Registration cli, bundled in Segmentation Aided Registration extension
• Simple Region Growing Segmentation cli, built-in
• Sobolev Segmenter cli, bundled in Sobolev Segmenter extension
• Spacing Aware Curvature Diffusion cli, bundled in IASEM extension
• Subtract Scalar Volumes cli, built-in
• SUVFactor Calculator cli, bundled in PETDICOMExtension extension
• Swiss Skull Stripper cli, bundled in Swiss Skull Stripper extension
• Test Grid Transform Registration cli, built-in
• Threshold Scalar Volume cli, built-in
• Tractography Label Map Seeding cli, built-in
• VBRAINSDemon Warp cli, built-in
• Voting Binary Hole Filling Image Filter cli, built-in

loadable

• Annotations loadable, built-in
• Cameras loadable, built-in
• Carrera Slice loadable, bundled in Carrera Slice extension
• Colors loadable, built-in
• Crop Volume loadable, built-in
• Data loadable, built-in
• Data Store loadable, built-in
• Dice Computation loadable, bundled in Dice Computation extension
• Double Arrays loadable, built-in
• EMSegment loadable, built-in
• EMSegment Quick loadable, built-in
• Fast Grow Cut loadable, bundled in Fast Grow Cut Effect extension
• Fast Grow Cut Segmenter loadable, bundled in Carrera Slice extension
• Gel Dosimetry Analysis Algo loadable, bundled in Gel Dosimetry Analysis extension
• Longitudinal PETCT loadable, bundled in Longitudinal PETCT extension
• Markups loadable, built-in
• Matlab Module Generator loadable, bundled in Matlab Bridge extension
• Metafile Importer loadable, bundled in Multidim Data extension
• Models loadable, built-in
• Multi Volume Explorer loadable, built-in
• Open IGTLink IF loadable, built-in
• Perk Evaluator loadable, bundled in Perk Tutor extension
• Reformat loadable, built-in
• Reporting loadable, bundled in Reporting extension
• Scene Views loadable, built-in
• Sequence Browser loadable, bundled in Multidim Data extension
• Sequences loadable, bundled in Multidim Data extension
• Subject Hierarchy loadable, built-in
• Tracker Stabilizer loadable, bundled in Tracker Stabilizer extension
• Tractography Display loadable, built-in
• Tractography Interactive Seeding loadable, built-in
• Transform Recorder loadable, bundled in Perk Tutor extension
• Transforms loadable, built-in
• Units loadable, built-in
• View Controllers loadable, built-in
• Volume Rendering loadable, built-in
• Volumes loadable, built-in
• Welcome loadable, built-in
• Workflow Segmentation loadable, bundled in Perk Tutor extension

scripted

• Binary Watershed Effect scripted, bundled in IASEM extension
• Carrera Slice Effect scripted, bundled in Carrera Slice extension
• Change Tracker scripted, bundled in Change Tracker extension
• Charting scripted, built-in
• Compare Volumes scripted, bundled in CMFreg extension
• Corner Annotation scripted, bundled in Corner Annotation extension
• Curve Maker scripted, bundled in Curve Maker extension
• Data Probe scripted, built-in
• DICOM scripted, built-in
• DICOM2Full Brain Tractography scripted, built-in
• Double Threshold Effect scripted, bundled in IASEM extension
• Editor scripted, built-in
• Endoscopy scripted, built-in
• Extension Wizard scripted, built-in
• Fast Grow Cut Effect scripted, bundled in Fast Grow Cut Effect extension
• Fiber Bundle To Label Map scripted, built-in
• Gyro Guide scripted, bundled in Gyro Guide extension
• i Gyne scripted, bundled in i Gyne extension
• KUtil scripted, bundled in Carrera Slice extension
• Label Object Statistics scripted, bundled in IASEM extension
• Label Statistics scripted, built-in
• Label To DICOMSEGConverter scripted, bundled in Reporting extension
• Landmark Registration scripted, bundled in CMFreg extension
• Multi Volume Importer scripted, built-in
• Needle Finder scripted, bundled in Needle Finder extension
• Percutaneous Approach Analysis scripted, bundled in Percutaneous Approach Analysis extension
• Port Placement scripted, bundled in Port Placement extension
• Py Dev Remote Debug scripted, bundled in Py Dev Remote Debug extension
• Python Metrics Calculator scripted, bundled in Perk Tutor extension
• Sample Data scripted, built-in
• Scene Performance scripted, built-in
• Scoliosis Monitoring scripted, bundled in Scoliosis extension
• Simple Filters scripted, built-in
• Slice Link Logic scripted, built-in
• Slicer4Minute scripted, built-in
• Slicer To Kiwi Exporter scripted, bundled in Slicer To Kiwi Exporter extension
• Spinal Curvature Measurement scripted, bundled in Scoliosis extension
• Surface Registration scripted, bundled in CMFreg extension
• Surface Toolbox scripted, built-in
• TCIABrowser scripted, bundled in TCIABrowser extension
• Thingiverse Browser scripted, bundled in Thingiverse Browser extension
• Vector To Scalar Volume scripted, built-in
• Volume Clip With Model scripted, bundled in Volume Clip extension
• Volume Clip With Roi scripted, bundled in Volume Clip extension
• Volume Rendering Scene Close scripted, built-in
• Window Level Effect scripted, bundled in Window Level Effect extension
• Xnat Slicer scripted, bundled in XNATSlicer extension

Modules by type

3 types:

• cli
• loadable
• scripted

Extensions by name

67 extensions:

• ABC
• Airway Segmentation
• Cardiac MRI Toolkit
• Cardiac Agaston Measures
• Carrera Slice
• CBC 3D I2MConversion
• Change Tracker
• Cleaver Extension
• CMFreg
• Corner Annotation
• Curve Maker
• Dice Computation
• DTIAtlas Builder
• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Erode Dilate Label
• Faceted Visualizer
• Fast Grow Cut Effect
• Fiber Viewer Light
• Finsler Tractography
• Gel Dosimetry Analysis
• Gyro Guide
• hough Transform CLI
• IASEM
• i Gyne
• Image Maker
• Intensity Segmenter
• LAScar Segmenter
• LASegmenter
• Light Weight Robot IGT
• Longitudinal PETCT
• MABMIS
• Matlab Bridge
• Model Clip
• Model To Model Distance
• Multidim Data
• Needle Finder
• Open CAD
• PBNRR
• Percutaneous Approach Analysis
• Perk Tutor
• PETDICOMExtension
• Pk Modeling
• Port Placement
• Py Dev Remote Debug
• Reporting
• Resection Planner
• RSSExtension
• Scoliosis
• Segmentation Aided Registration
• Shape Population Viewer
• Skull Stripper
• VMTK
• Slicer IGT
• Slicer RT
• Slicer To Kiwi Exporter
• Sobolev Segmenter
• SPHARM-PDM
• Swiss Skull Stripper
• TCIABrowser
• Thingiverse Browser
• Tracker Stabilizer
• UKFTractography
• Volume Clip
• Window Level Effect
• XNATSlicer

Extensions by name

67 extensions:

Extensions by category

26 categories:

• Cardiac
• Cardiac MRI toolkit
• Converters
• Developer Tools
• Diffusion
• Editor Effects
• Exporter
• Filtering
  • Morphology
• IGT
• Informatics
• Mesh Generation
• Microscopy
• Multidimensional data
• Quantification
• Radiotherapy
• Registration
• Remote
• Scoliosis
• Segmentation
• Shape Analysis
• Surface Models
• Tractography
• Training
• Utilities
• Vascular Modeling Toolkit
• Wizards

Cardiac

• CardiacAgastonMeasures

Cardiac MRI toolkit

• Cardiac_MRI_Toolkit

Converters

• PETDICOMExtension

Developer Tools

• ImageMaker
• PyDevRemoteDebug
• MatlabBridge

Diffusion

• DTIAtlasBuilder
• DTIProcess
• FiberViewerLight
• DTIAtlasFiberAnalyzer
• DTIPrep

Editor Effects

• WindowLevelEffect

Exporter

• SlicerToKiwiExporter

Filtering

Morphology

• ErodeDilateLabel

IGT

• PortPlacement
• LightWeightRobotIGT
• GyroGuide
• CornerAnnotation
• iGyne
• SlicerIGT
• PercutaneousApproachAnalysis
• NeedleFinder
• TrackerStabilizer
• ResectionPlanner

Informatics

• Reporting
• LongitudinalPETCT
• FacetedVisualizer
• TCIABrowser
• CurveMaker

Mesh Generation

• CBC_3D_I2MConversion
• CleaverExtension

Microscopy

• IASEM

Multidimensional data

• MultidimData

Quantification

• DiceComputation
• PkModeling

Radiotherapy

• SlicerRT
• GelDosimetryAnalysis

Registration

• CMFreg
• SegmentationAidedRegistration
• PBNRR

Remote

• XNATSlicer

Scoliosis

• Scoliosis

Segmentation

• OpenCAD
• SwissSkullStripper
• CarreraSlice
• SkullStripper
• AirwaySegmentation
• houghTransformCLI
• LAScarSegmenter
• RSSExtension
• ABC
• MABMIS
• SobolevSegmenter
• LASegmenter
• FastGrowCutEffect
• IntensitySegmenter
• VolumeClip

Shape Analysis

• ModelToModelDistance
• ShapePopulationViewer
• SPHARM-PDM

Surface Models

• ModelClip

Tractography

• FinslerTractography
• UKFTractography

Training

• PerkTutor

Utilities

• ThingiverseBrowser

Vascular Modeling Toolkit

• SlicerExtension-VMTK

Wizards

• ChangeTracker

Extensions by contributing organization

54 contributing organizations:

• Asclepios INRIA) and Nikos Chrisochoides (CRTC
• Boston Childrens Hospital
• Brigham and Women's Hospital
• BWH
• BWH & MGH
• BWH, SPL
• BWH/UAB
• CARMA
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
• Crisalix
• CRTC
• Department of Neurosurgery, PLA General Hospital, Beijing, China
• Department of Orthodontics, UNC
• GE
• GE GLobal Research
• GT
• Isomics
• Kitware
• LUH
• Massachusetts General Hospital
• Moka Creative LLC, Washington University in St. Louis
• NIRAL, UNC
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan
• Shiga University of Medical Science, Japan, SPL
• SPL
• SPL and BWH
• SPL B&W Harvard
• SRI
• Stony Brook University
• Surgical Planning Lab
• UAB
• UIowa
• UNC
• Univ of Michigan
• University College Cork
• University of Bern
• University of Heidelberg
• University of Iowa
• University of Utah
• Utah
• UWA
• Washington University in St. Louis
• yogesh@bwh.harvard.edu

Asclepios INRIA) and Nikos Chrisochoides (CRTC

• PBNRR

Boston Childrens Hospital

• VMTK

Brigham and Women's Hospital

• Erode Dilate Label
• Slicer IGT

BWH

• Change Tracker
• Curve Maker
• Dice Computation
• Fast Grow Cut Effect
• Light Weight Robot IGT
• Open CAD
• Pk Modeling
• RSSExtension
• Segmentation Aided Registration
• Tracker Stabilizer

BWH & MGH

• Carrera Slice

BWH, SPL

• PETDICOMExtension

BWH/UAB

• Segmentation Aided Registration

CARMA

• Cardiac MRI Toolkit

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

• Gyro Guide

Crisalix

• Swiss Skull Stripper

CRTC

• CBC 3D I2MConversion
• PBNRR

Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide

Department of Orthodontics, UNC

• Intensity Segmenter

GE

• Faceted Visualizer
• Pk Modeling
• Skull Stripper

GE GLobal Research

• MABMIS

GT

• Carrera Slice

Isomics

• Carrera Slice
• Finsler Tractography
• VMTK
• Slicer To Kiwi Exporter
• XNATSlicer

Kitware

• Change Tracker
• Image Maker
• Matlab Bridge
• Port Placement
• VMTK
• Slicer To Kiwi Exporter

LUH

• Light Weight Robot IGT

Massachusetts General Hospital

• Slicer RT

Moka Creative LLC, Washington University in St. Louis

• XNATSlicer

NIRAL, UNC

• Intensity Segmenter
• Shape Population Viewer

Noware

• Swiss Skull Stripper

Orobix

• VMTK

PerkLab at Queen's University

• Py Dev Remote Debug

PerkLab, Queen's

• Multidim Data

PerkLab, Queen's University

• Gel Dosimetry Analysis
• Matlab Bridge
• Scoliosis
• Slicer RT
• Volume Clip

PMH

• Multidim Data

Queen's University

• Perk Tutor
• Resection Planner
• Slicer IGT

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Bridge
• Slicer RT

SBU

• LAScar Segmenter
• LASegmenter
• RSSExtension

SCI Institute

• Cleaver Extension

Shiga University of Medical Science, Japan

• Corner Annotation

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis

SPL

• Change Tracker
• Percutaneous Approach Analysis
• Reporting
• Window Level Effect

SPL and BWH

• TCIABrowser

SPL B&W Harvard

• PBNRR

SRI

• Pk Modeling

Stony Brook University

• Carrera Slice
• Fast Grow Cut Effect

Surgical Planning Lab

• Longitudinal PETCT

UAB

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration
• Sobolev Segmenter

UIowa

• Cardiac Agaston Measures

UNC

• CMFreg
• DTIAtlas Builder
• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Fiber Viewer Light
• MABMIS
• Model To Model Distance
• Port Placement
• SPHARM-PDM

Univ of Michigan

• CMFreg

University College Cork

• Airway Segmentation

University of Bern

• Swiss Skull Stripper

University of Heidelberg

• Longitudinal PETCT

University of Iowa

• PETDICOMExtension

University of Utah

• ABC

Utah

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

UWA

• Thingiverse Browser

Washington University in St. Louis

• XNATSlicer

yogesh@bwh.harvard.edu

• UKFTractography

Extensions by contributing organization

54 contributing organizations:

• Asclepios INRIA) and Nikos Chrisochoides (CRTC
• Boston Childrens Hospital
• Brigham and Women's Hospital
• BWH
• BWH & MGH
• BWH, SPL
• BWH/UAB
• CARMA
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
• Crisalix
• CRTC
• Department of Neurosurgery, PLA General Hospital, Beijing, China
• Department of Orthodontics, UNC
• GE
• GE GLobal Research
• GT
• Isomics
• Kitware
• LUH
• Massachusetts General Hospital
• Moka Creative LLC, Washington University in St. Louis
• NIRAL, UNC
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan
• Shiga University of Medical Science, Japan, SPL
• SPL
• SPL and BWH
• SPL B&W Harvard
• SRI
• Stony Brook University
• Surgical Planning Lab
• UAB
• UIowa
• UNC
• Univ of Michigan
• University College Cork
• University of Bern
• University of Heidelberg
• University of Iowa
• University of Utah
• Utah
• UWA
• Washington University in St. Louis
• yogesh@bwh.harvard.edu

Extensions by contributing individual

136 contributing individuals:

• Alireza Mehrtash
• Allen Tannenbaum
• Akila Viswanathan
• Alex Yarmarkovich
• Alireza Mehrtash
• Allen Tannenbaum
• Andre Mastmeyer
• Antonio Damato
• Carl-Fredrik Westin
• Carl-Fredrik Westin.
• Christian Baumgartner
• Hans Johnson
• Ipek Oguz
• Ivan Kolesov
• Jan Egger
• Jiashu Zhang
• Kent Williams
• Lauren Barber
• Liangjia Zhu
• Luping Fang
• Martin Styner
• Matt Lougheed
• Matthew S. Holden
• Nabgha Fahrat
• Patricio Vela
• Peter Savadjiev
• Qing Pan
• Ryan Eckbo
• Sam Song
• Sandy Wells
• Tina Kapur
• Tobias Penzkofer
• Xiaojun CHEN
• Xiaojun Chen
• Yi Gao
• Yinpeng Li
• Yundi Shi
• Adrien Kaiser
• Alan Morris
• Alexis Girault
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• Andinet Enquobahrie
• Andras Lasso
• Andrey Fedorov
• Andriy Fedorov
• Andriy Kot
• Antonio Tristan-Vega
• Arie Nakhmani
• Arnaud Gelas
• Atsushi Yamada
• Beatriz Paniagua
• Bill Lorensen
• Bradley Lowekamp
• Brig Bagley
• Csaba Pinter
• Dan Marcus
• Daniel Haehn
• Danny Perry
• Demian Wasssermann
• Dinggang Shen
• Ethan Ulrich
• Eugene Kholmovski
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Greg Sharp
• Guillaume Pernelle
• Hans Johnson
• Harini Veeraraghavan
• Ivan Kolesov
• Jayender Jagadeesan
• Jean-Christophe Fillion-Robin
• Jennifer Andrea
• Jessica Forbes
• Jim Miller
• Jonathan Bronson
• Josh Cates
• Julien Finet
• Juliette Pera
• Jun LIN
• Junichi Tokuda
• Karl Fritscher
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Mahnaz Maddah
• Manson Winsauer
• Marcel Prastawa
• Martha Shenton
• Martin Styner
• Matt Lougheed
• Mattea Welch
• Matthew Holden
• Mauricio Reyes
• Ming-ching Chang
• Minjeong Kim
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pietro Nardelli
• Rick Herrick
• Rob Mac Leod
• Ron Kikinis
• Ruifeng Chen
• Salma Bengali
• Sebastian Tauscher
• Stefan Bauer
• Stefan Lienhard
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• Thomas Fejes
• Vinicius Boen
• Vivek Narayan
• Xiaodong Tao
• Xiaofeng Liu
• Xiaolei Chen
• Yi Gao
• Yingxuan Zhu
• Yixun Liu
• Yogesh Rathi

Alireza Mehrtash

• i Gyne

Allen Tannenbaum

• Fast Grow Cut Effect

Akila Viswanathan

• i Gyne
• Needle Finder

Alex Yarmarkovich

• Finsler Tractography

Alireza Mehrtash

• Needle Finder

Allen Tannenbaum

• Carrera Slice

Andre Mastmeyer

• Needle Finder

Antonio Damato

• i Gyne
• Needle Finder

Carl-Fredrik Westin

• Finsler Tractography

Carl-Fredrik Westin.

• UKFTractography

Christian Baumgartner

• UKFTractography

Hans Johnson

• UKFTractography

Ipek Oguz

• UKFTractography

Ivan Kolesov

• Fast Grow Cut Effect

Jan Egger

• i Gyne
• Needle Finder

Jiashu Zhang

• Gyro Guide

Kent Williams

• UKFTractography

Lauren Barber

• i Gyne
• Needle Finder

Liangjia Zhu

• Carrera Slice

Luping Fang

• Gyro Guide

Martin Styner

• UKFTractography

Matt Lougheed

• Volume Clip

Matthew S. Holden

• Perk Tutor

Nabgha Fahrat

• i Gyne
• Needle Finder

Patricio Vela

• Carrera Slice

Peter Savadjiev

• Finsler Tractography
• UKFTractography

Qing Pan

• Gyro Guide

Ryan Eckbo

• UKFTractography

Sam Song

• i Gyne
• Needle Finder

Sandy Wells

• i Gyne
• Needle Finder

Tina Kapur

• i Gyne
• Needle Finder

Tobias Penzkofer

• i Gyne
• Needle Finder

Xiaojun CHEN

• Model Clip

Xiaojun Chen

• i Gyne
• Needle Finder

Yi Gao

• i Gyne
• Needle Finder

Yinpeng Li

• UKFTractography

Yundi Shi

• UKFTractography

Adrien Kaiser

• DTIAtlas Builder

Alan Morris

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Alexis Girault

• Shape Population Viewer

Alireza Mehrtash

• TCIABrowser

Allen Tannenbaum

• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration
• Sobolev Segmenter

and Ron Kikinis

• Fast Grow Cut Effect

Andinet Enquobahrie

• Port Placement

Andras Lasso

• Matlab Bridge
• Multidim Data
• Py Dev Remote Debug
• Slicer RT
• Tracker Stabilizer
• Volume Clip

Andrey Fedorov

• CBC 3D I2MConversion
• Change Tracker
• Longitudinal PETCT
• PBNRR
• PETDICOMExtension
• Reporting
• TCIABrowser
• Window Level Effect

Andriy Fedorov

• Pk Modeling

Andriy Kot

• PBNRR

Antonio Tristan-Vega

• Finsler Tractography

Arie Nakhmani

• Sobolev Segmenter

Arnaud Gelas

• Swiss Skull Stripper

Atsushi Yamada

• Corner Annotation

Beatriz Paniagua

• Intensity Segmenter
• Model To Model Distance
• SPHARM-PDM

Bill Lorensen

• Swiss Skull Stripper

Bradley Lowekamp

• IASEM

Brig Bagley

• Cleaver Extension

Csaba Pinter

• Gel Dosimetry Analysis
• Slicer RT

Dan Marcus

• XNATSlicer

Daniel Haehn

• VMTK

Danny Perry

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Demian Wasssermann

• Finsler Tractography

Dinggang Shen

• MABMIS

Ethan Ulrich

• PETDICOMExtension

Eugene Kholmovski

• Cardiac MRI Toolkit

Fotis Drakopoulos

• CBC 3D I2MConversion
• PBNRR

Francois Budin

• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Fiber Viewer Light
• Intensity Segmenter
• Model To Model Distance
• SPHARM-PDM

Franklin King

• Scoliosis

Greg Gardner

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Greg Sharp

• Slicer RT

Guillaume Pernelle

• hough Transform CLI
• i Gyne
• Needle Finder

Hans Johnson

• Cardiac Agaston Measures

Harini Veeraraghavan

• Faceted Visualizer

Ivan Kolesov

• Carrera Slice

Jayender Jagadeesan

• Open CAD
• Tracker Stabilizer

Jean-Christophe Fillion-Robin

• Change Tracker
• Matlab Bridge
• VMTK
• Slicer To Kiwi Exporter

Jennifer Andrea

• Gel Dosimetry Analysis

Jessica Forbes

• Cardiac Agaston Measures

Jim Miller

• MABMIS
• Pk Modeling

Jonathan Bronson

• Cleaver Extension

Josh Cates

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Julien Finet

• Image Maker

Juliette Pera

• Model To Model Distance

Jun LIN

• Model Clip

Junichi Tokuda

• Curve Maker
• Erode Dilate Label
• Light Weight Robot IGT
• Percutaneous Approach Analysis
• Slicer IGT

Karl Fritscher

• Carrera Slice

Kevin Wang

• Matlab Bridge
• Multidim Data
• Slicer RT

Kilian Pohl

• Change Tracker

Koichiro Murakami

• Percutaneous Approach Analysis

Laurent Chauvin

• Dice Computation
• Percutaneous Approach Analysis
• Tracker Stabilizer

Liang-Jia Zhu

• Segmentation Aided Registration

Liangjia Zhu

• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter

Luca Antiga

• VMTK

Luis G. Torres

• Port Placement

Mahnaz Maddah

• Pk Modeling

Manson Winsauer

• CMFreg

Marcel Prastawa

• ABC

Martha Shenton

• RSSExtension

Martin Styner

• SPHARM-PDM

Matt Lougheed

• Resection Planner

Mattea Welch

• Gel Dosimetry Analysis

Matthew Holden

• Multidim Data

Mauricio Reyes

• Swiss Skull Stripper

Ming-ching Chang

• Pk Modeling

Minjeong Kim

• MABMIS

Nicole Aucoin

• Reporting

Nigel Goh

• Thingiverse Browser

Nikos Chrisochoides

• CBC 3D I2MConversion

Olivier Clatz

• PBNRR

Pat Marion

• Slicer To Kiwi Exporter

Paul Mercea

• Longitudinal PETCT

Pengdong Xiao

• Intensity Segmenter

Peter Black

• Change Tracker

Peter Karasev

• Carrera Slice

Pietro Nardelli

• Airway Segmentation

Rick Herrick

• XNATSlicer

Rob MacLeod

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Ron Kikinis

• Change Tracker
• RSSExtension

Ruifeng Chen

• Gyro Guide

Salma Bengali

• Cardiac MRI Toolkit

Sebastian Tauscher

• Light Weight Robot IGT

Stefan Bauer

• Swiss Skull Stripper

Stefan Lienhard

• UKFTractography

Steve Pieper

• Carrera Slice
• Reporting
• VMTK
• Slicer To Kiwi Exporter
• Window Level Effect
• XNATSlicer

Sunil Kumar

• XNATSlicer

Sylvain Bouix

• RSSExtension
• Segmentation Aided Registration

Tamas Ungi

• Perk Tutor
• Scoliosis
• Slicer IGT

Thomas Fejes

• Swiss Skull Stripper

Vinicius Boen

• CMFreg

Vivek Narayan

• Open CAD

Xiaodong Tao

• Skull Stripper

Xiaofeng Liu

• MABMIS

Xiaolei Chen

• Gyro Guide

Yi Gao

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration

Yingxuan Zhu

• Pk Modeling

Yixun Liu

• CBC 3D I2MConversion
• PBNRR

Yogesh Rathi

• UKFTractography

Extensions by contributing individual

136 contributing individuals:

• Alireza Mehrtash
• Allen Tannenbaum
• Akila Viswanathan
• Alex Yarmarkovich
• Alireza Mehrtash
• Allen Tannenbaum
• Andre Mastmeyer
• Antonio Damato
• Carl-Fredrik Westin
• Carl-Fredrik Westin.
• Christian Baumgartner
• Hans Johnson
• Ipek Oguz
• Ivan Kolesov
• Jan Egger
• Jiashu Zhang
• Kent Williams
• Lauren Barber
• Liangjia Zhu
• Luping Fang
• Martin Styner
• Matt Lougheed
• Matthew S. Holden
• Nabgha Fahrat
• Patricio Vela
• Peter Savadjiev
• Qing Pan
• Ryan Eckbo
• Sam Song
• Sandy Wells
• Tina Kapur
• Tobias Penzkofer
• Xiaojun CHEN
• Xiaojun Chen
• Yi Gao
• Yinpeng Li
• Yundi Shi
• Adrien Kaiser
• Alan Morris
• Alexis Girault
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• Andinet Enquobahrie
• Andras Lasso
• Andrey Fedorov
• Andriy Fedorov
• Andriy Kot
• Antonio Tristan-Vega
• Arie Nakhmani
• Arnaud Gelas
• Atsushi Yamada
• Beatriz Paniagua
• Bill Lorensen
• Bradley Lowekamp
• Brig Bagley
• Csaba Pinter
• Dan Marcus
• Daniel Haehn
• Danny Perry
• Demian Wasssermann
• Dinggang Shen
• Ethan Ulrich
• Eugene Kholmovski
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Greg Sharp
• Guillaume Pernelle
• Hans Johnson
• Harini Veeraraghavan
• Ivan Kolesov
• Jayender Jagadeesan
• Jean-Christophe Fillion-Robin
• Jennifer Andrea
• Jessica Forbes
• Jim Miller
• Jonathan Bronson
• Josh Cates
• Julien Finet
• Juliette Pera
• Jun LIN
• Junichi Tokuda
• Karl Fritscher
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Mahnaz Maddah
• Manson Winsauer
• Marcel Prastawa
• Martha Shenton
• Martin Styner
• Matt Lougheed
• Mattea Welch
• Matthew Holden
• Mauricio Reyes
• Ming-ching Chang
• Minjeong Kim
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pietro Nardelli
• Rick Herrick
• Rob Mac Leod
• Ron Kikinis
• Ruifeng Chen
• Salma Bengali
• Sebastian Tauscher
• Stefan Bauer
• Stefan Lienhard
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• Thomas Fejes
• Vinicius Boen
• Vivek Narayan
• Xiaodong Tao
• Xiaofeng Liu
• Xiaolei Chen
• Yi Gao
• Yingxuan Zhu
• Yixun Liu
• Yogesh Rathi