User:UpdateBot/Issue-2843-Consolidated-Extension-List

• Modules by name
• Modules by category
• Modules by contributing organization
• Modules by contributing individual
• Extensions by name
• Extensions by category
• Extensions by contributing organization
• Extensions by contributing individual

Modules by name

156 modules:

• ABC (bundled in ABC extension)
• ACPCTransform (built-in)
• Add Scalar Volumes (built-in)
• Airway Segmentation CLI (bundled in Airway Segmentation extension)
• Annotations (built-in)
• Apply Matrix (bundled in CMFreg extension)
• Bin Shrink (bundled in IASEM extension)
• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• BRAINSDemon Warp (built-in)
• BRAINSDWICleanup (built-in)
• BRAINSFit (built-in)
• BRAINSLabel Stats (built-in)
• BRAINSResample (built-in)
• BRAINSResize (built-in)
• BRAINSROIAuto (built-in)
• BRAINSTransform Convert (built-in)
• Carrera Slice (bundled in Carrera Slice extension)
• Cast Scalar Volume (built-in)
• Change Tracker (bundled in Change Tracker extension)
• Checker Board Filter (built-in)
• Cleaver CLI (bundled in Cleaver Extension extension)
• Colors (built-in)
• Compare Volumes (bundled in CMFreg extension)
• Corner Annotation (bundled in Corner Annotation extension)
• Create DICOMSeries (built-in)
• Crop Volume (built-in)
• Curvature Anisotropic Diffusion (built-in)
• Curve Maker (bundled in Curve Maker extension)
• Data (built-in)
• Data Probe (built-in)
• Data Store (built-in)
• Dice Computation (bundled in Dice Computation extension)
• DICOM (built-in)
• DICOM2Full Brain Tractography (built-in)
• Diffusion Tensor Scalar Measurements (built-in)
• Diffusion Weighted Volume Masking (built-in)
• Dilate Label (bundled in Erode Dilate Label extension)
• Downsize (bundled in CMFreg extension)
• DWIConvert (built-in)
• DWIJoint Rician LMMSEFilter (built-in)
• DWIRician LMMSEFilter (built-in)
• DWITo DTIEstimation (built-in)
• Editor (built-in)
• EMSegment (built-in)
• EMSegment Command Line (built-in)
• EMSegment Quick (built-in)
• EMSegment Transform To New Format (built-in)
• Endoscopy (built-in)
• Erode Label (bundled in Erode Dilate Label extension)
• Extract Skeleton (built-in)
• Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
• Fiber Bundle Label Select (built-in)
• Fiber Bundle To Label Map (built-in)
• Fiducial Registration (built-in)
• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)
• Gaussian Blur Image Filter (built-in)
• Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
• Gradient Anisotropic Diffusion (built-in)
• Grayscale Fill Hole Image Filter (built-in)
• Grayscale Grind Peak Image Filter (built-in)
• Grayscale Model Maker (built-in)
• Growing (bundled in CMFreg extension)
• Gyro Guide (bundled in Gyro Guide extension)
• Histogram Matching (built-in)
• IASEMImport (bundled in IASEM extension)
• IASEMImport Series (bundled in IASEM extension)
• IGR3D MABMIS Testing (bundled in MABMIS extension)
• IGR3D MABMIS Training (bundled in MABMIS extension)
• i Gyne (bundled in i Gyne extension)
• Image Label Combine (built-in)
• Intensity Difference Metric (bundled in Change Tracker extension)
• Intensity Segmenter (bundled in Intensity Segmenter extension)
• KUtil (bundled in Carrera Slice extension)
• Label Addition (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Label Map Smoothing (built-in)
• Label Object Statistics (bundled in IASEM extension)
• Label Statistics (built-in)
• Label To DICOMSEGConverter (bundled in Reporting extension)
• Landmark Registration (bundled in CMFreg extension)
• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Longitudinal PETCT (bundled in Longitudinal PETCT extension)
• Markups (built-in)
• Mask Creation (bundled in CMFreg extension)
• Mask Scalar Volume (built-in)
• Median Image Filter (built-in)
• Merge Models (built-in)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• Metafile Importer (bundled in Multidim Data extension)
• Model Maker (built-in)
• Models (built-in)
• Model To Label Map (built-in)
• Multiply Scalar Volumes (built-in)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• N4ITKBias Field Correction (built-in)
• Needle Finder (bundled in Needle Finder extension)
• Non Growing (bundled in CMFreg extension)
• Open IGTLink IF (built-in)
• Orient Scalar Volume (built-in)
• PBNRR (bundled in PBNRR extension)
• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
• Perform Metric Test (built-in)
• Perk Evaluator (bundled in Perk Tutor extension)
• PETStandard Uptake Value Computation (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Pk Modeling (bundled in Pk Modeling extension)
• Port Placement (bundled in Port Placement extension)
• Probe Volume With Model (built-in)
• Python Metrics Calculator (bundled in Perk Tutor extension)
• Reformat (built-in)
• Reporting (bundled in Reporting extension)
• Resample DTIVolume (built-in)
• Resample Scalar Vector DWIVolume (built-in)
• Robust Statistics Segmenter (built-in)
• Sample Data (built-in)
• Scene Views (built-in)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)
• Simple Filters (built-in)
• Simple Region Growing Segmentation (built-in)
• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
• Sobolev Segmenter (bundled in Sobolev Segmenter extension)
• Spacing Aware Curvature Diffusion (bundled in IASEM extension)
• Spinal Curvature Measurement (bundled in Scoliosis extension)
• Subject Hierarchy (built-in)
• Subtract Scalar Volumes (built-in)
• Surface Registration (bundled in CMFreg extension)
• Surface Toolbox (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
• TCIABrowser (bundled in TCIABrowser extension)
• Thingiverse Browser (bundled in Thingiverse Browser extension)
• Threshold Scalar Volume (built-in)
• Tracker Stabilizer (bundled in Tracker Stabilizer extension)
• Tractography Display (built-in)
• Tractography Interactive Seeding (built-in)
• Tractography Label Map Seeding (built-in)
• Transform Recorder (bundled in Perk Tutor extension)
• Transforms (built-in)
• Units (built-in)
• VBRAINSDemon Warp (built-in)
• Vector To Scalar Volume (built-in)
• View Controllers (built-in)
• Volume Clip With Model (bundled in Volume Clip extension)
• Volume Clip With Roi (bundled in Volume Clip extension)
• Volume Rendering (built-in)
• Volumes (built-in)
• Voting Binary Hole Filling Image Filter (built-in)
• Welcome (built-in)
• Window Level Effect (bundled in Window Level Effect extension)
• Workflow Segmentation (bundled in Perk Tutor extension)
• Xnat Slicer (bundled in XNATSlicer extension)

Modules by category

30 categories:

• BRAINS
  • Label Statistics
• CMF Registration
  • Voxelbase Registration
• Converters
• Developer Tools
  • DICOM Plugins
  • Editor Extensions
  • Matlab
• Diffusion
  • Diffusion Data Conversion
  • Diffusion Tensor Images
  • Diffusion Weighted Images
  • Tractography
• Editor Effects
• Endoscopy
• Examples
• Exporter
• Filtering
  • Arithmetic
  • Denoising
  • Morphology
• IGT
• Informatics
• Legacy
  • Converters
  • Diffusion
    • Denoising
    • Diffusion Data Conversion
  • Filtering
  • Registration
  • Work in Progress
    • Diffusion Tensor
      • Test
• Mesh Generation
• Mesh Generation
• Microscopy
• Multidimensional data
• Multi Volume Support
• Perk Tutor
• Quantification
  • Change Quantification
• Registration
  • Specialized
• Segmentation
  • Specialized
• Slicelets
• Surface Models
• Testing
  • Test Cases
• Unspecified
• Utilities
  • BRAINS
• Wizards
• Work in Progress
  • Converters
  • Informatics
    • Test Cases
• XNATSlicer

BRAINS

LabelStatistics

• BRAINSLabel Stats (built-in)

CMF Registration

• Apply Matrix (bundled in CMFreg extension)
• Landmark Registration (bundled in CMFreg extension)
• Surface Registration (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Label Addition (bundled in CMFreg extension)
• Downsize (bundled in CMFreg extension)

Voxelbase Registration

• Growing (bundled in CMFreg extension)
• Mask Creation (bundled in CMFreg extension)
• Non Growing (bundled in CMFreg extension)

Converters

• Vector To Scalar Volume (built-in)
• Crop Volume (built-in)
• Create DICOMSeries (built-in)
• Orient Scalar Volume (built-in)

Developer Tools

• Event Broker
• Double Arrays (built-in)
• Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)
• Cameras (built-in)
• Extension Wizard (built-in)
• Execution Model Tour (built-in)
• Image Maker (bundled in Image Maker extension)

DICOM Plugins

• DICOMRWVMPlugin
• DICOMLongitudinal PETCTPlugin
• Multi Volume Importer Plugin
• DICOMPETSUVPlugin
• DICOMDiffusion Volume Plugin
• DICOMSegmentation Plugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin

Editor Extensions

• Binary Watershed Effect (bundled in IASEM extension)
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
• Carrera Slice Effect (bundled in Carrera Slice extension)
• Double Threshold Effect (bundled in IASEM extension)

Matlab

• Matlab Module Generator (bundled in Matlab Bridge extension)
• Matlab Commander (bundled in Matlab Bridge extension)

Diffusion

• Tractography Display (built-in)
• DICOM2Full Brain Tractography (built-in)

Diffusion Data Conversion

• DWIConvert (built-in)

Diffusion Tensor Images

• Resample DTIVolume (built-in)
• Diffusion Tensor Scalar Measurements (built-in)
• Tractography Label Map Seeding (built-in)
• Tractography Interactive Seeding (built-in)

Diffusion Weighted Images

• DWIRician LMMSEFilter (built-in)
• DWIJoint Rician LMMSEFilter (built-in)
• DWITo DTIEstimation (built-in)
• Finsler Backtracing (bundled in Finsler Tractography extension)
• Resample Scalar Vector DWIVolume (built-in)
• Finsler Tractography (bundled in Finsler Tractography extension)
• Diffusion Weighted Volume Masking (built-in)

Tractography

• Fiber Bundle To Label Map (built-in)
• Fiber Bundle Label Select (built-in)

Editor Effects

• Window Level Effect (bundled in Window Level Effect extension)

Endoscopy

• Endoscopy (built-in)

Examples

• Carrera Slice (bundled in Carrera Slice extension)
• Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Exporter

• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)

Filtering

• Extract Skeleton (built-in)
• Threshold Scalar Volume (built-in)
• N4ITKBias Field Correction (built-in)
• Simple Filters (built-in)
• Image Label Combine (built-in)
• Voting Binary Hole Filling Image Filter (built-in)
• Histogram Matching (built-in)
• Checker Board Filter (built-in)

Arithmetic

• Multiply Scalar Volumes (built-in)
• Add Scalar Volumes (built-in)
• Cast Scalar Volume (built-in)
• Subtract Scalar Volumes (built-in)
• Mask Scalar Volume (built-in)

Denoising

• Gradient Anisotropic Diffusion (built-in)
• Median Image Filter (built-in)
• Gaussian Blur Image Filter (built-in)
• Curvature Anisotropic Diffusion (built-in)

Morphology

• Grayscale Fill Hole Image Filter (built-in)
• Erode Label (bundled in Erode Dilate Label extension)
• Dilate Label (bundled in Erode Dilate Label extension)
• Grayscale Grind Peak Image Filter (built-in)

IGT

• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
• Port Placement (bundled in Port Placement extension)
• Open IGTLink IF (built-in)
• Needle Finder (bundled in Needle Finder extension)
• Tracker Stabilizer (bundled in Tracker Stabilizer extension)
• Gyro Guide (bundled in Gyro Guide extension)
• i Gyne (bundled in i Gyne extension)
• Corner Annotation (bundled in Corner Annotation extension)

Informatics

• Annotations (built-in)
• Markups (built-in)
• Units (built-in)
• DICOM (built-in)
• Sample Data (built-in)
• Subject Hierarchy (built-in)
• Data (built-in)
• Colors (built-in)
• Curve Maker (bundled in Curve Maker extension)
• TCIABrowser (bundled in TCIABrowser extension)

Legacy

Converters

• BSpline To Deformation Field (built-in)

Diffusion

Denoising

• DWIUnbiased Non Local Means Filter (built-in)

Diffusion Data Conversion

• DTIimport (built-in)
• DTIexport (built-in)

Filtering

• Otsu Threshold Image Filter (built-in)
• Resample Scalar Volume (built-in)

Registration

• Test Grid Transform Registration (built-in)
• Expert Automated Registration (built-in)

Work in Progress

Diffusion Tensor

Test

• Diffusion Tensor Test (built-in)

Mesh Generation

• Cleaver CLI (bundled in Cleaver Extension extension)

MeshGeneration

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)

Microscopy

• Bin Shrink (bundled in IASEM extension)
• Label Object Statistics (bundled in IASEM extension)
• Spacing Aware Curvature Diffusion (bundled in IASEM extension)
• IASEMImport Series (bundled in IASEM extension)
• IASEMImport (bundled in IASEM extension)

Multidimensional data

• Metafile Importer (bundled in Multidim Data extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)

MultiVolume Support

• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)

Perk Tutor

• Python Metrics Calculator (bundled in Perk Tutor extension)
• Workflow Segmentation (bundled in Perk Tutor extension)
• Transform Recorder (bundled in Perk Tutor extension)
• Perk Evaluator (bundled in Perk Tutor extension)

Quantification

• PETStandard Uptake Value Computation (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• Spinal Curvature Measurement (bundled in Scoliosis extension)
• Pk Modeling (bundled in Pk Modeling extension)
• Label Statistics (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Dice Computation (bundled in Dice Computation extension)
• Data Probe (built-in)

ChangeQuantification

• Intensity Difference Metric (bundled in Change Tracker extension)

Registration

• BRAINSResample (built-in)
• Transforms (built-in)
• BRAINSResize (built-in)
• Perform Metric Test (built-in)
• BRAINSFit (built-in)
• PBNRR (bundled in PBNRR extension)

Specialized

• ACPCTransform (built-in)
• Fiducial Registration (built-in)
• VBRAINSDemon Warp (built-in)
• BRAINSDemon Warp (built-in)
• Reformat (built-in)

Segmentation

• Editor (built-in)
• EMSegment Quick (built-in)
• Simple Region Growing Segmentation (built-in)
• EMSegment (built-in)
• Volume Clip With Roi (bundled in Volume Clip extension)
• Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
• Airway Segmentation CLI (bundled in Airway Segmentation extension)
• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Sobolev Segmenter (bundled in Sobolev Segmenter extension)
• Volume Clip With Model (bundled in Volume Clip extension)
• IGR3D MABMIS Testing (bundled in MABMIS extension)
• ABC (bundled in ABC extension)
• IGR3D MABMIS Training (bundled in MABMIS extension)
• Intensity Segmenter (bundled in Intensity Segmenter extension)

Specialized

• EMSegment Command Line (built-in)
• Robust Statistics Segmenter (built-in)
• BRAINSROIAuto (built-in)

Slicelets

• Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)

Surface Models

• Model To Label Map (built-in)
• Merge Models (built-in)
• Surface Toolbox (built-in)
• Probe Volume With Model (built-in)
• Grayscale Model Maker (built-in)
• Label Map Smoothing (built-in)
• Model Maker (built-in)

Testing

• Self Tests
• CLIROITest (built-in)
• CLI4Test
• Threshold Threading Test
• Scoliosis Monitoring (bundled in Scoliosis extension)
• Performance Tests
• Slicer MRBTest

TestCases

• Slice Link Logic (built-in)
• Atlas Tests
• RSNAQuant Tutorial
• Volume Rendering Scene Close (built-in)
• test tractography display
• Subject Hierarchy Core Plugins Self Test
• slicer Close Crash Bug2590
• Subject Hierarchy Generic Self Test
• Charting (built-in)
• Scene Performance (built-in)
• Markups In Compare Viewers Self Test
• fiber visibility crash2438
• scene Import2428
• RSNAVis Tutorial
• JRC2013Vis
• RSNA2012Prostate Demo
• Add Many Markups Fiducial Test
• Neurosurgical Planning Tutorial Markups Self Test
• Colors Scalar Bar Self Test
• Markups In Views Self Test
• Change Tracker Self Test
• Fiducial Layout Switch Bug1914
• View Controllers Slice Interpolation Bug1926
• Slicer4Minute (built-in)
• label Toggle Bug2049

Unspecified

• BRAINSDWICleanup (built-in)

Utilities

• Thingiverse Browser (bundled in Thingiverse Browser extension)
• EMSegment Transform To New Format (built-in)
• Data Store (built-in)

BRAINS

• BRAINSTransform Convert (built-in)

Wizards

• Compare Volumes (bundled in CMFreg extension)
• Change Tracker (bundled in Change Tracker extension)

Work in Progress

• Longitudinal PETCT (bundled in Longitudinal PETCT extension)

Converters

• Label To DICOMSEGConverter (bundled in Reporting extension)

Informatics

• Reporting (bundled in Reporting extension)

TestCases

• Reporting Self Test
• Label To DICOMSEGConverter Self Test

XNATSlicer

• Xnat Slicer (bundled in XNATSlicer extension)

Modules by contributing organization

62 contributing organizations:

• Asclepios INRIA
• AZE R&D
• Brigham and Women's Hospital
• BWH
• BWH, SPL
• BWH, SUMS
• BWH/UAB
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
• CRTC
• gatech
• GE
• Georgia Institute of Technology
• Georgia Tech
• IBM
• Isomics
• Isomics Inc.
• Isomics, Inc.
• Isomics, pieper@isomics.com
• Kitware
• Kitware)
• MGH
• Moka Creative, LLC, kumar.sunil.p@gmail.com
• MSC/NLM
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SAIC-Frederick, NCI-Frederick
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan, SPL
• SNR
• SPL
• SPL B&W Harvard
• SPL, BWH
• SPL, BWH, UPenn
• Stony Brook University
• SUMS
• Surgical Planning Lab
• UAB
• Uiowa
• UIowa
• UNC
• Univ of Michigan
• Univ. of Iowa
• University College Cork
• University of Alabama Birmingham
• University of Heidelberg
• University of Iowa
• University of Iowa) and Andrey Fedorov (SPL
• UPenn
• Utah
• UVa
• UWA
• Wash U-St. Louis, dmarcus@wustl.edu
• while at GE

Asclepios INRIA

• PBNRR (bundled in PBNRR extension)

AZE R&D

• JRC2013Vis

Brigham and Women's Hospital

• Corner Annotation (bundled in Corner Annotation extension)
• Surface Toolbox (built-in)
• test tractography display

BWH

• Add Many Markups Fiducial Test
• Change Tracker Self Test
• Colors Scalar Bar Self Test
• Curve Maker (bundled in Curve Maker extension)
• Dice Computation (bundled in Dice Computation extension)
• DICOMRWVMPlugin
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
• Fiducial Layout Switch Bug1914
• Markups (built-in)
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Neurosurgical Planning Tutorial Markups Self Test
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
• Volume Rendering Scene Close (built-in)
• Window Level Effect (bundled in Window Level Effect extension)

BWH, SPL

• Crop Volume (built-in)

BWH, SUMS

• Corner Annotation (bundled in Corner Annotation extension)

BWH/UAB

• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide (bundled in Gyro Guide extension)

CRTC

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• PBNRR (bundled in PBNRR extension)

gatech

• Robust Statistics Segmenter (built-in)

GE

• Add Scalar Volumes (built-in)
• Charting (built-in)
• Checker Board Filter (built-in)
• Create DICOMSeries (built-in)
• Curvature Anisotropic Diffusion (built-in)
• Diffusion Tensor Test (built-in)
• DWIConvert (built-in)
• Execution Model Tour (built-in)
• Gradient Anisotropic Diffusion (built-in)
• Grayscale Fill Hole Image Filter (built-in)
• Grayscale Grind Peak Image Filter (built-in)
• Grayscale Model Maker (built-in)
• Histogram Matching (built-in)
• Label Map Smoothing (built-in)
• Median Image Filter (built-in)
• Model Maker (built-in)
• Model To Label Map (built-in)
• Multiply Scalar Volumes (built-in)
• Orient Scalar Volume (built-in)
• Otsu Threshold Image Filter (built-in)
• Pk Modeling (bundled in Pk Modeling extension)
• Resample Scalar Volume (built-in)
• Simple Region Growing Segmentation (built-in)
• Slice Link Logic (built-in)
• Slicer4Minute (built-in)
• Spacing Aware Curvature Diffusion (bundled in IASEM extension)
• Subtract Scalar Volumes (built-in)
• View Controllers (built-in)
• View Controllers Slice Interpolation Bug1926
• Voting Binary Hole Filling Image Filter (built-in)

Georgia Institute of Technology

• Carrera Slice Effect (bundled in Carrera Slice extension)

Georgia Tech

• Carrera Slice (bundled in Carrera Slice extension)

IBM

• Annotations (built-in)

Isomics

• Atlas Tests
• Binary Watershed Effect (bundled in IASEM extension)
• Compare Volumes (bundled in CMFreg extension)
• Data (built-in)
• Data Probe (built-in)
• DICOM (built-in)
• Editor (built-in)
• Endoscopy (built-in)
• fiber visibility crash2438
• Fiber Bundle To Label Map (built-in)
• Label Statistics (built-in)
• label Toggle Bug2049
• Landmark Registration (bundled in CMFreg extension)
• Models (built-in)
• Performance Tests
• Reporting (bundled in Reporting extension)
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data (built-in)
• scene Import2428
• Self Tests
• Simple Filters (built-in)
• slicer Close Crash Bug2590
• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
• Tractography Interactive Seeding (built-in)
• Transforms (built-in)
• Vector To Scalar Volume (built-in)
• View Controllers (built-in)
• Volume Rendering (built-in)
• Volumes (built-in)

Isomics Inc.

• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Slicer MRBTest
• Threshold Threading Test

Isomics, Inc.

• Carrera Slice Effect (bundled in Carrera Slice extension)

Isomics, pieper@isomics.com

• Xnat Slicer (bundled in XNATSlicer extension)

Kitware

• Cameras (built-in)
• Colors (built-in)
• Data (built-in)
• Data Store (built-in)
• Double Arrays (built-in)
• Event Broker
• Expert Automated Registration (built-in)
• Extension Wizard (built-in)
• Extract Skeleton (built-in)
• Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
• fiber visibility crash2438
• Fiducial Registration (built-in)
• Gaussian Blur Image Filter (built-in)
• Image Maker (bundled in Image Maker extension)
• label Toggle Bug2049
• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)
• Models (built-in)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• Port Placement (bundled in Port Placement extension)
• Reformat (built-in)
• Sample Data (built-in)
• Scene Performance (built-in)
• Simple Filters (built-in)
• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
• Threshold Scalar Volume (built-in)
• Tractography Display (built-in)
• Transforms (built-in)
• Units (built-in)
• View Controllers (built-in)
• Volume Rendering (built-in)
• Volumes (built-in)
• Welcome (built-in)

Kitware)

• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

MGH

• Pk Modeling (bundled in Pk Modeling extension)

Moka Creative, LLC, kumar.sunil.p@gmail.com

• Xnat Slicer (bundled in XNATSlicer extension)

MSC/NLM

• Label Object Statistics (bundled in IASEM extension)
• Simple Filters (built-in)

Noware

• Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)

Orobix

• Surface Toolbox (built-in)

PerkLab at Queen's University

• Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)

PerkLab, Queen's

• Metafile Importer (bundled in Multidim Data extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)
• Transforms (built-in)

PerkLab, Queen's University

• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)
• Volume Clip With Model (bundled in Volume Clip extension)

PMH

• Colors Scalar Bar Self Test
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)

Queen's

• Data (built-in)
• Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
• Subject Hierarchy (built-in)
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test

Queen's University

• Perk Evaluator (bundled in Perk Tutor extension)
• Python Metrics Calculator (bundled in Perk Tutor extension)
• Scoliosis Monitoring (bundled in Scoliosis extension)
• Spinal Curvature Measurement (bundled in Scoliosis extension)
• Transform Recorder (bundled in Perk Tutor extension)
• Volume Clip With Roi (bundled in Volume Clip extension)
• Workflow Segmentation (bundled in Perk Tutor extension)

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)

SAIC-Frederick, NCI-Frederick

• Volume Rendering (built-in)

SBU

• LAScar Segmenter (bundled in LAScar Segmenter extension)

SCI Institute

• Cleaver CLI (bundled in Cleaver Extension extension)

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)

SNR

• Tracker Stabilizer (bundled in Tracker Stabilizer extension)

SPL

• DICOM2Full Brain Tractography (built-in)
• Label To DICOMSEGConverter Self Test
• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
• Pk Modeling (bundled in Pk Modeling extension)
• Reporting Self Test
• Tracker Stabilizer (bundled in Tracker Stabilizer extension)

SPL B&W Harvard

• PBNRR (bundled in PBNRR extension)

SPL, BWH

• ACPCTransform (built-in)
• Annotations (built-in)
• BSpline To Deformation Field (built-in)
• Cast Scalar Volume (built-in)
• Colors (built-in)
• Data (built-in)
• Diffusion Tensor Scalar Measurements (built-in)
• Diffusion Weighted Volume Masking (built-in)
• DTIexport (built-in)
• DTIimport (built-in)
• DWITo DTIEstimation (built-in)
• Fiducial Registration (built-in)
• Grayscale Model Maker (built-in)
• Image Label Combine (built-in)
• Mask Scalar Volume (built-in)
• Merge Models (built-in)
• Model Maker (built-in)
• Models (built-in)
• Model To Label Map (built-in)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• N4ITKBias Field Correction (built-in)
• PETStandard Uptake Value Computation (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Probe Volume With Model (built-in)
• Reporting (bundled in Reporting extension)
• Robust Statistics Segmenter (built-in)
• Scene Views (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• TCIABrowser (bundled in TCIABrowser extension)
• Test Grid Transform Registration (built-in)
• Threshold Scalar Volume (built-in)
• Tractography Label Map Seeding (built-in)
• View Controllers (built-in)
• Volume Rendering (built-in)
• Volumes (built-in)
• Welcome (built-in)

SPL, BWH, UPenn

• Merge Models (built-in)

Stony Brook University

• Carrera Slice Effect (bundled in Carrera Slice extension)
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)

SUMS

• Corner Annotation (bundled in Corner Annotation extension)

Surgical Planning Lab

• Label To DICOMSEGConverter (bundled in Reporting extension)

UAB

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
• Sobolev Segmenter (bundled in Sobolev Segmenter extension)

Uiowa

• DWIConvert (built-in)

UIowa

• DWIConvert (built-in)

UNC

• DWIRician LMMSEFilter (built-in)
• Extract Skeleton (built-in)
• Intensity Segmenter (bundled in Intensity Segmenter extension)
• Port Placement (bundled in Port Placement extension)
• Resample DTIVolume (built-in)
• Resample Scalar Vector DWIVolume (built-in)

Univ of Michigan

• Surface Registration (bundled in CMFreg extension)

Univ. of Iowa

• DICOMPETSUVPlugin
• DICOMRWVMPlugin

University College Cork

• Airway Segmentation CLI (bundled in Airway Segmentation extension)

University of Alabama Birmingham

• Carrera Slice Effect (bundled in Carrera Slice extension)
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)

University of Heidelberg

• Longitudinal PETCT (bundled in Longitudinal PETCT extension)

University of Iowa

• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)

University of Iowa) and Andrey Fedorov (SPL

• Longitudinal PETCT (bundled in Longitudinal PETCT extension)

UPenn

• Annotations (built-in)
• EMSegment (built-in)
• N4ITKBias Field Correction (built-in)
• Scene Views (built-in)

Utah

• Label Map Smoothing (built-in)
• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

UVa

• DWIJoint Rician LMMSEFilter (built-in)
• DWIRician LMMSEFilter (built-in)
• DWIUnbiased Non Local Means Filter (built-in)

UWA

• Thingiverse Browser (bundled in Thingiverse Browser extension)

WashU-St. Louis, dmarcus@wustl.edu

• Xnat Slicer (bundled in XNATSlicer extension)

while at GE

• Pk Modeling (bundled in Pk Modeling extension)

Modules by contributing individual

163 contributing individuals:

• Alex Yarmarkovich
• Ali Ghayoor
• Allen Tannenbaum
• and Hans Johnson.
• Beatriz Paniagua from Department of Orthodontics
• Brad Davis
• BWH
• Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
• Daniel Haehn
• Demian Wassermann
• Dinggang Shen
• Francois Budin
• Greg Harris
• hans-johnson -at- uiowa.edu
• http://www.psychiatry.uiowa.edu
• Ivan Kolesov
• Kilian Pohl
• Lauren O'Donnell
• Liangjia Zhu
• Luping Fang
• Matt Lougheed
• Neuro Image Resarch and Analysis Laboratory
• Patricio Vela
• Peter Karasev
• Peter Savadjiev
• Polina Golland
• Qing Pan
• the University of North Carolina at Chapel Hill
• UNC Medical School
• Uof M School of Dentistry
• Uof M School Of Dentistry
• Xiaofeng Liu
• Yumin Yuan
• Akila Viswanathan
• Alan Morris
• Alex Yarmakovich
• Alex Yarmarkovich
• Ali Ghayoor
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• and Steve Pieper
• Andinet Enquobahrie
• Andras Lasso
• Andreas Freudling
• Andrey Fedorov
• Andriy Kot
• Anonymous
• Antonio Damato
• Antonio Tristan Vega
• Arie Nakhmani
• Atsushi Yamada
• Benjamin Long
• Bill Lorensen
• Bradley Lowekamp
• Bradley Lowekamp and Bill Lorensen
• Casey B Goodlett
• Charles Marion
• Csaba Pinter
• Dan Marcus
• Daniel Blezek
• Daniel Haehn
• Danny Perry
• Demian Wassermann
• Dirk Padfield
• Dominik Meier
• Ethan Ulrich
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Guido Gerig
• Guillaume Pernelle
• Hans J. Johnson
• Hans Johnson
• Ivan Kolesov
• Jan Egger
• Jayender Jagadeesan
• Jean-Baptiste Berger
• Jean-Christophe Fillion-Robin
• Jim Miller
• Johan Andruejol
• John Evans
• Jonathan Bronson
• Josh Cates
• Joy Matsui
• Julien Finet
• Julien Jomier
• Junichi Tokuda
• Kent Williams
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Lauren Barber
• Lauren O'Donnell
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Marc Niethammer
• Marcel Prastawa prastawa@sci.utah.edu
• Mark Scully
• Markus Van Tol
• Martin Styner
• Matthew Holden
• Matthew S. Holden
• Matthew Woehlke
• Michael Jeulin-Lagarrigue
• Minjeong Kim
• Nabgha Fahrat
• Nicholas Herlambang
• Nick Tustison
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pierre Seroul
• Pietro Nardelli
• Raul San Jose
• Rob Mac Leod
• Ron Kikinis
• Ross Whitaker
• Ruifeng Chen
• Sam Song
• Sandy Wells
• Santiago Aja Fernandez
• Sebastien Barré
• Sebastien Barre
• Shigeyuki Naka
• Soichiro Tani
• Sonia Pujol
• Stephen Aylward
• Stephen R Aylward
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• This tool was developed by Hans J. Johnson and Greg Harris.
• This tool was developed by Hans Johnson.
• This tool was developed by Kent Williams.
• This tool was developed by Vincent Magnotta
• Tina Kapur
• Tobias Penzkofer
• Tohru Tani
• Vince Magnotta
• Vincent A. Magnotta
• Vinicius Boen
• Vinicius Boen and Mason Winsauer
• Wendy Plesniak
• Xiaodong Tao
• Xiaojun Chen
• Yanling Liu
• Yi Gao
• Yinglin Lee
• Yingxuan Zhu
• Yixun Liu
• Yong Zhang

Alex Yarmarkovich

• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

Ali Ghayoor

• BRAINSTransform Convert (built-in)

Allen Tannenbaum

• Carrera Slice Effect (bundled in Carrera Slice extension)
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)

and Hans Johnson.

• BRAINSResample (built-in)

Beatriz Paniagua from Department of Orthodontics

• Intensity Segmenter (bundled in Intensity Segmenter extension)

Brad Davis

• EMSegment Command Line (built-in)

BWH

• DICOMSegmentation Plugin
• Multi Volume Importer Plugin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

Daniel Haehn

• EMSegment Command Line (built-in)

Demian Wassermann

• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

Dinggang Shen

• IGR3D MABMIS Testing (bundled in MABMIS extension)
• IGR3D MABMIS Training (bundled in MABMIS extension)

Francois Budin

• Intensity Segmenter (bundled in Intensity Segmenter extension)

Greg Harris

• BRAINSResample (built-in)

hans-johnson -at- uiowa.edu

• BRAINSFit (built-in)
• BRAINSROIAuto (built-in)

http://www.psychiatry.uiowa.edu

• BRAINSFit (built-in)
• BRAINSROIAuto (built-in)

Ivan Kolesov

• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)

Kilian Pohl

• EMSegment (built-in)
• EMSegment Command Line (built-in)

Lauren O'Donnell

• Fiber Bundle Label Select (built-in)

Liangjia Zhu

• Carrera Slice Effect (bundled in Carrera Slice extension)

Luping Fang

• Gyro Guide (bundled in Gyro Guide extension)

Matt Lougheed

• Volume Clip With Model (bundled in Volume Clip extension)

Neuro Image Resarch and Analysis Laboratory

• Apply Matrix (bundled in CMFreg extension)
• Downsize (bundled in CMFreg extension)
• Growing (bundled in CMFreg extension)
• Label Addition (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Mask Creation (bundled in CMFreg extension)
• Non Growing (bundled in CMFreg extension)

Patricio Vela

• Carrera Slice Effect (bundled in Carrera Slice extension)

Peter Karasev

• Carrera Slice (bundled in Carrera Slice extension)

Peter Savadjiev

• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

Polina Golland

• EMSegment Command Line (built-in)

Qing Pan

• Gyro Guide (bundled in Gyro Guide extension)

the University of North Carolina at Chapel Hill

• Intensity Segmenter (bundled in Intensity Segmenter extension)

UNC Medical School

• Apply Matrix (bundled in CMFreg extension)
• Downsize (bundled in CMFreg extension)
• Growing (bundled in CMFreg extension)
• Label Addition (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Mask Creation (bundled in CMFreg extension)
• Non Growing (bundled in CMFreg extension)

UofM School of Dentistry

• Apply Matrix (bundled in CMFreg extension)
• Downsize (bundled in CMFreg extension)
• Label Addition (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Mask Creation (bundled in CMFreg extension)
• Non Growing (bundled in CMFreg extension)

UofM School Of Dentistry

• Growing (bundled in CMFreg extension)

Xiaofeng Liu

• IGR3D MABMIS Testing (bundled in MABMIS extension)
• IGR3D MABMIS Training (bundled in MABMIS extension)

Yumin Yuan

• EMSegment Command Line (built-in)

Akila Viswanathan

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Alan Morris

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Alex Yarmakovich

• Models (built-in)
• Tractography Interactive Seeding (built-in)

Alex Yarmarkovich

• Data (built-in)
• Image Label Combine (built-in)
• Transforms (built-in)
• Volume Rendering (built-in)
• Volumes (built-in)

Ali Ghayoor

• Perform Metric Test (built-in)

Alireza Mehrtash

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)
• TCIABrowser (bundled in TCIABrowser extension)

Allen Tannenbaum

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Robust Statistics Segmenter (built-in)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
• Sobolev Segmenter (bundled in Sobolev Segmenter extension)

and Ron Kikinis

• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)

and Steve Pieper

• Carrera Slice Effect (bundled in Carrera Slice extension)

Andinet Enquobahrie

• Port Placement (bundled in Port Placement extension)

Andras Lasso

• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)
• Metafile Importer (bundled in Multidim Data extension)
• Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)
• Transforms (built-in)
• Volume Clip With Model (bundled in Volume Clip extension)
• Volume Clip With Roi (bundled in Volume Clip extension)

Andreas Freudling

• Volume Rendering (built-in)

Andrey Fedorov

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• BSpline To Deformation Field (built-in)
• Change Tracker (bundled in Change Tracker extension)
• Change Tracker Self Test
• Crop Volume (built-in)
• DICOMRWVMPlugin
• DICOMSegmentation Plugin
• Intensity Difference Metric (bundled in Change Tracker extension)
• Label To DICOMSEGConverter (bundled in Reporting extension)
• Label To DICOMSEGConverter Self Test
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• Multi Volume Importer Plugin
• N4ITKBias Field Correction (built-in)
• PBNRR (bundled in PBNRR extension)
• Pk Modeling (bundled in Pk Modeling extension)
• Reporting (bundled in Reporting extension)
• Reporting Self Test
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• TCIABrowser (bundled in TCIABrowser extension)
• Window Level Effect (bundled in Window Level Effect extension)

Andriy Kot

• PBNRR (bundled in PBNRR extension)

Anonymous

• CLIROITest (built-in)
• EMSegment Transform To New Format (built-in)

Antonio Damato

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Antonio Tristan Vega

• DWIJoint Rician LMMSEFilter (built-in)
• DWIRician LMMSEFilter (built-in)
• DWIUnbiased Non Local Means Filter (built-in)
• Finsler Backtracing (bundled in Finsler Tractography extension)
• Finsler Tractography (bundled in Finsler Tractography extension)

Arie Nakhmani

• Sobolev Segmenter (bundled in Sobolev Segmenter extension)

Atsushi Yamada

• Corner Annotation (bundled in Corner Annotation extension)

Benjamin Long

• Sample Data (built-in)

Bill Lorensen

• Add Scalar Volumes (built-in)
• Checker Board Filter (built-in)
• Create DICOMSeries (built-in)
• Curvature Anisotropic Diffusion (built-in)
• Diffusion Tensor Test (built-in)
• Execution Model Tour (built-in)
• Gradient Anisotropic Diffusion (built-in)
• Grayscale Fill Hole Image Filter (built-in)
• Grayscale Grind Peak Image Filter (built-in)
• Grayscale Model Maker (built-in)
• Histogram Matching (built-in)
• Median Image Filter (built-in)
• Model Maker (built-in)
• Multiply Scalar Volumes (built-in)
• Orient Scalar Volume (built-in)
• Otsu Threshold Image Filter (built-in)
• Resample Scalar Volume (built-in)
• Subtract Scalar Volumes (built-in)
• Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
• Voting Binary Hole Filling Image Filter (built-in)

Bradley Lowekamp

• Bin Shrink (bundled in IASEM extension)
• Double Threshold Effect (bundled in IASEM extension)
• IASEMImport (bundled in IASEM extension)
• IASEMImport Series (bundled in IASEM extension)
• Label Object Statistics (bundled in IASEM extension)
• Simple Filters (built-in)

Bradley Lowekamp and Bill Lorensen

• Spacing Aware Curvature Diffusion (bundled in IASEM extension)

Casey B Goodlett

• Expert Automated Registration (built-in)
• Fiducial Registration (built-in)

Charles Marion

• Data Store (built-in)

Csaba Pinter

• Data (built-in)
• Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
• Subject Hierarchy (built-in)
• Subject Hierarchy Core Plugins Self Test
• Subject Hierarchy Generic Self Test

Dan Marcus

• Xnat Slicer (bundled in XNATSlicer extension)

Daniel Blezek

• Execution Model Tour (built-in)

Daniel Haehn

• Annotations (built-in)
• EMSegment (built-in)
• Merge Models (built-in)
• Scene Views (built-in)

Danny Perry

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Demian Wassermann

• DICOM2Full Brain Tractography (built-in)
• Diffusion Weighted Volume Masking (built-in)
• Fiber Bundle Label Select (built-in)
• test tractography display
• Tractography Label Map Seeding (built-in)

Dirk Padfield

• Label Map Smoothing (built-in)

Dominik Meier

• Fiducial Registration (built-in)

Ethan Ulrich

• DICOMPETSUVPlugin
• DICOMRWVMPlugin
• SUVFactor Calculator (bundled in PETDICOMExtension extension)

Fotis Drakopoulos

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• PBNRR (bundled in PBNRR extension)

Francois Budin

• Resample DTIVolume (built-in)
• Resample Scalar Vector DWIVolume (built-in)

Franklin King

• Scoliosis Monitoring (bundled in Scoliosis extension)
• Spinal Curvature Measurement (bundled in Scoliosis extension)
• Transforms (built-in)

Greg Gardner

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Guido Gerig

• Extract Skeleton (built-in)

Guillaume Pernelle

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Hans J. Johnson

• BRAINSFit (built-in)
• BRAINSROIAuto (built-in)
• BRAINSTransform Convert (built-in)

Hans Johnson

• DWIConvert (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)

Ivan Kolesov

• Carrera Slice (bundled in Carrera Slice extension)
• Carrera Slice Effect (bundled in Carrera Slice extension)

Jan Egger

• i Gyne (bundled in i Gyne extension)

Jayender Jagadeesan

• Tracker Stabilizer (bundled in Tracker Stabilizer extension)

Jean-Baptiste Berger

• Data Store (built-in)

Jean-Christophe Fillion-Robin

• CLI4Test
• Data Store (built-in)
• Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
• Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
• fiber visibility crash2438
• label Toggle Bug2049
• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• Sample Data (built-in)
• Simple Filters (built-in)
• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
• Transforms (built-in)
• View Controllers (built-in)
• Welcome (built-in)

Jim Miller

• Charting (built-in)
• Pk Modeling (bundled in Pk Modeling extension)
• Simple Region Growing Segmentation (built-in)
• Slice Link Logic (built-in)
• Slicer4Minute (built-in)
• View Controllers (built-in)
• View Controllers Slice Interpolation Bug1926

Johan Andruejol

• Units (built-in)

John Evans

• Pk Modeling (bundled in Pk Modeling extension)

Jonathan Bronson

• Cleaver CLI (bundled in Cleaver Extension extension)

Josh Cates

• Label Map Smoothing (built-in)
• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Joy Matsui

• DWIConvert (built-in)

Julien Finet

• Cameras (built-in)
• Colors (built-in)
• Data (built-in)
• Double Arrays (built-in)
• Event Broker
• Image Maker (bundled in Image Maker extension)
• Models (built-in)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• Scene Performance (built-in)
• Threshold Scalar Volume (built-in)
• Tractography Display (built-in)
• Transforms (built-in)
• Units (built-in)
• Volume Rendering (built-in)
• Volumes (built-in)

Julien Jomier

• Gaussian Blur Image Filter (built-in)

Junichi Tokuda

• Corner Annotation (bundled in Corner Annotation extension)
• Curve Maker (bundled in Curve Maker extension)
• Dilate Label (bundled in Erode Dilate Label extension)
• Erode Label (bundled in Erode Dilate Label extension)
• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)

Kent Williams

• BRAINSTransform Convert (built-in)
• DWIConvert (built-in)

Kevin Wang

• Colors Scalar Bar Self Test
• Matlab Commander (bundled in Matlab Bridge extension)
• Matlab Module Generator (bundled in Matlab Bridge extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)

Kilian Pohl

• Annotations (built-in)
• Change Tracker (bundled in Change Tracker extension)
• Scene Views (built-in)

Koichiro Murakami

• Corner Annotation (bundled in Corner Annotation extension)
• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)

Lauren Barber

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Lauren O'Donnell

• Probe Volume With Model (built-in)

Laurent Chauvin

• Curve Maker (bundled in Curve Maker extension)
• Dice Computation (bundled in Dice Computation extension)
• Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
• Tracker Stabilizer (bundled in Tracker Stabilizer extension)

Liang-Jia Zhu

• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Liangjia Zhu

• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
• LAScar Segmenter (bundled in LAScar Segmenter extension)

Luca Antiga

• Surface Toolbox (built-in)

Luis G. Torres

• Port Placement (bundled in Port Placement extension)

Marc Niethammer

• DWIRician LMMSEFilter (built-in)

Marcel Prastawa prastawa@sci.utah.edu

• ABC (bundled in ABC extension)

Mark Scully

• DWIConvert (built-in)

Markus Van Tol

• Longitudinal PETCT (bundled in Longitudinal PETCT extension)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)

Martin Styner

• Extract Skeleton (built-in)

Matthew Holden

• Metafile Importer (bundled in Multidim Data extension)
• Python Metrics Calculator (bundled in Perk Tutor extension)
• Sequence Browser (bundled in Multidim Data extension)
• Sequences (bundled in Multidim Data extension)

Matthew S. Holden

• Perk Evaluator (bundled in Perk Tutor extension)
• Transform Recorder (bundled in Perk Tutor extension)
• Workflow Segmentation (bundled in Perk Tutor extension)

Matthew Woehlke

• Extension Wizard (built-in)

Michael Jeulin-Lagarrigue

• Reformat (built-in)

Minjeong Kim

• IGR3D MABMIS Testing (bundled in MABMIS extension)
• IGR3D MABMIS Training (bundled in MABMIS extension)

Nabgha Fahrat

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Nicholas Herlambang

• JRC2013Vis

Nick Tustison

• N4ITKBias Field Correction (built-in)

Nicole Aucoin

• ACPCTransform (built-in)
• Add Many Markups Fiducial Test
• Annotations (built-in)
• Cast Scalar Volume (built-in)
• Colors (built-in)
• Colors Scalar Bar Self Test
• Data (built-in)
• Fiducial Layout Switch Bug1914
• Grayscale Model Maker (built-in)
• Markups (built-in)
• Markups In Compare Viewers Self Test
• Markups In Views Self Test
• Mask Scalar Volume (built-in)
• Merge Models (built-in)
• Model Maker (built-in)
• Models (built-in)
• Model To Label Map (built-in)
• Neurosurgical Planning Tutorial Markups Self Test
• PETStandard Uptake Value Computation (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Reporting (bundled in Reporting extension)
• Scene Views (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• Threshold Scalar Volume (built-in)
• Volume Rendering Scene Close (built-in)
• Volumes (built-in)

Nigel Goh

• Thingiverse Browser (bundled in Thingiverse Browser extension)

Nikos Chrisochoides

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• PBNRR (bundled in PBNRR extension)

Olivier Clatz

• PBNRR (bundled in PBNRR extension)

Pat Marion

• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)

Paul Mercea

• Longitudinal PETCT (bundled in Longitudinal PETCT extension)

Pengdong Xiao

• Intensity Segmenter (bundled in Intensity Segmenter extension)

Peter Black

• Change Tracker (bundled in Change Tracker extension)

Peter Karasev

• Carrera Slice Effect (bundled in Carrera Slice extension)

Pierre Seroul

• Extract Skeleton (built-in)

Pietro Nardelli

• Airway Segmentation CLI (bundled in Airway Segmentation extension)

Raul San Jose

• Diffusion Tensor Scalar Measurements (built-in)
• DWITo DTIEstimation (built-in)
• Tractography Label Map Seeding (built-in)

Rob MacLeod

• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Ron Kikinis

• ACPCTransform (built-in)
• Cast Scalar Volume (built-in)
• Change Tracker (bundled in Change Tracker extension)
• Crop Volume (built-in)
• Mask Scalar Volume (built-in)
• Merge Models (built-in)
• Model Maker (built-in)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• N4ITKBias Field Correction (built-in)
• PETStandard Uptake Value Computation (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Robust Statistics Segmenter (built-in)
• Surface Toolbox (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• Threshold Scalar Volume (built-in)
• View Controllers (built-in)
• Volume Rendering (built-in)

Ross Whitaker

• Label Map Smoothing (built-in)

Ruifeng Chen

• Gyro Guide (bundled in Gyro Guide extension)

Sam Song

• i Gyne (bundled in i Gyne extension)

Sandy Wells

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Santiago Aja Fernandez

• DWIJoint Rician LMMSEFilter (built-in)
• DWIRician LMMSEFilter (built-in)
• DWIUnbiased Non Local Means Filter (built-in)

Sebastien Barré

• Cameras (built-in)

Sebastien Barre

• EMSegment Command Line (built-in)

Shigeyuki Naka

• Corner Annotation (bundled in Corner Annotation extension)

Soichiro Tani

• Corner Annotation (bundled in Corner Annotation extension)

Sonia Pujol

• Dice Computation (bundled in Dice Computation extension)
• DTIexport (built-in)
• DTIimport (built-in)

Stephen Aylward

• Extract Skeleton (built-in)
• Gaussian Blur Image Filter (built-in)

Stephen R Aylward

• Expert Automated Registration (built-in)

Steve Pieper

• Atlas Tests
• Binary Watershed Effect (bundled in IASEM extension)
• Compare Volumes (bundled in CMFreg extension)
• Data Probe (built-in)
• DICOM (built-in)
• DICOMDiffusion Volume Plugin
• DICOMLongitudinal PETCTPlugin
• DICOMScalar Volume Plugin
• DICOMSlicer Data Bundle Plugin
• Editor (built-in)
• Endoscopy (built-in)
• fiber visibility crash2438
• Fiber Bundle To Label Map (built-in)
• Label Statistics (built-in)
• label Toggle Bug2049
• Landmark Registration (bundled in CMFreg extension)
• Multi Volume Explorer (built-in)
• Multi Volume Importer (built-in)
• Performance Tests
• Reporting (bundled in Reporting extension)
• RSNA2012Prostate Demo
• RSNAQuant Tutorial
• RSNAVis Tutorial
• Sample Data (built-in)
• scene Import2428
• Self Tests
• Simple Filters (built-in)
• slicer Close Crash Bug2590
• Slicer MRBTest
• Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
• Threshold Threading Test
• Vector To Scalar Volume (built-in)
• View Controllers (built-in)
• Volumes (built-in)
• Xnat Slicer (bundled in XNATSlicer extension)

Sunil Kumar

• Xnat Slicer (bundled in XNATSlicer extension)

Sylvain Bouix

• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Tamas Ungi

• Perk Evaluator (bundled in Perk Tutor extension)
• Python Metrics Calculator (bundled in Perk Tutor extension)
• Scoliosis Monitoring (bundled in Scoliosis extension)
• Spinal Curvature Measurement (bundled in Scoliosis extension)
• Transform Recorder (bundled in Perk Tutor extension)
• Workflow Segmentation (bundled in Perk Tutor extension)

This tool was developed by Hans J. Johnson and Greg Harris.

• BRAINSDemon Warp (built-in)
• VBRAINSDemon Warp (built-in)

This tool was developed by Hans Johnson.

• BRAINSResize (built-in)

This tool was developed by Kent Williams.

• BRAINSDWICleanup (built-in)

This tool was developed by Vincent Magnotta

• BRAINSResample (built-in)

Tina Kapur

• i Gyne (bundled in i Gyne extension)
• Needle Finder (bundled in Needle Finder extension)

Tobias Penzkofer

• i Gyne (bundled in i Gyne extension)

Tohru Tani

• Corner Annotation (bundled in Corner Annotation extension)

Vince Magnotta

• DWIConvert (built-in)

Vincent A. Magnotta

• BRAINSLabel Stats (built-in)

Vinicius Boen

• Surface Registration (bundled in CMFreg extension)

Vinicius Boen and Mason Winsauer

• Apply Matrix (bundled in CMFreg extension)
• Downsize (bundled in CMFreg extension)
• Growing (bundled in CMFreg extension)
• Label Addition (bundled in CMFreg extension)
• Label Extraction (bundled in CMFreg extension)
• Mask Creation (bundled in CMFreg extension)
• Non Growing (bundled in CMFreg extension)

Wendy Plesniak

• Annotations (built-in)
• PETStandard Uptake Value Computation (built-in)
• PETSUVImage Maker (bundled in Longitudinal PETCT extension)
• Scene Views (built-in)
• SUVFactor Calculator (bundled in PETDICOMExtension extension)
• View Controllers (built-in)
• Welcome (built-in)

Xiaodong Tao

• DWIConvert (built-in)
• Model To Label Map (built-in)

Xiaojun Chen

• i Gyne (bundled in i Gyne extension)

Yanling Liu

• Volume Rendering (built-in)

Yi Gao

• Carrera Slice Effect (bundled in Carrera Slice extension)
• Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
• i Gyne (bundled in i Gyne extension)
• LAScar Segmenter (bundled in LAScar Segmenter extension)
• Needle Finder (bundled in Needle Finder extension)
• Robust Statistics Segmenter (built-in)
• Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)

Yinglin Lee

• Test Grid Transform Registration (built-in)

Yingxuan Zhu

• Pk Modeling (bundled in Pk Modeling extension)

Yixun Liu

• Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
• Mesh Compression (bundled in CBC 3D I2MConversion extension)
• PBNRR (bundled in PBNRR extension)

Yong Zhang

• Annotations (built-in)

Extensions by name

67 extensions:

• ABC
• Airway Segmentation
• Cardiac MRI Toolkit
• Cardiac Agaston Measures
• Carrera Slice
• CBC 3D I2MConversion
• Change Tracker
• Cleaver Extension
• CMFreg
• Corner Annotation
• Curve Maker
• Dice Computation
• DTIAtlas Builder
• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Erode Dilate Label
• Faceted Visualizer
• Fast Grow Cut Effect
• Fiber Viewer Light
• Finsler Tractography
• Gel Dosimetry Analysis
• Gyro Guide
• hough Transform CLI
• IASEM
• i Gyne
• Image Maker
• Intensity Segmenter
• LAScar Segmenter
• LASegmenter
• Light Weight Robot IGT
• Longitudinal PETCT
• MABMIS
• Matlab Bridge
• Model Clip
• Model To Model Distance
• Multidim Data
• Needle Finder
• Open CAD
• PBNRR
• Percutaneous Approach Analysis
• Perk Tutor
• PETDICOMExtension
• Pk Modeling
• Port Placement
• Py Dev Remote Debug
• Reporting
• Resection Planner
• RSSExtension
• Scoliosis
• Segmentation Aided Registration
• Shape Population Viewer
• Skull Stripper
• VMTK
• Slicer IGT
• Slicer RT
• Slicer To Kiwi Exporter
• Sobolev Segmenter
• SPHARM-PDM
• Swiss Skull Stripper
• TCIABrowser
• Thingiverse Browser
• Tracker Stabilizer
• UKFTractography
• Volume Clip
• Window Level Effect
• XNATSlicer

Extensions by category

26 categories:

• Cardiac
• Cardiac MRI toolkit
• Converters
• Developer Tools
• Diffusion
• Editor Effects
• Exporter
• Filtering
  • Morphology
• IGT
• Informatics
• Mesh Generation
• Microscopy
• Multidimensional data
• Quantification
• Radiotherapy
• Registration
• Remote
• Scoliosis
• Segmentation
• Shape Analysis
• Surface Models
• Tractography
• Training
• Utilities
• Vascular Modeling Toolkit
• Wizards

Cardiac

• Cardiac Agaston Measures

Cardiac MRI toolkit

• Cardiac MRI Toolkit

Converters

• PETDICOMExtension

Developer Tools

• Image Maker
• Py Dev Remote Debug
• Matlab Bridge

Diffusion

• DTIAtlas Builder
• DTIProcess
• Fiber Viewer Light
• DTIAtlas Fiber Analyzer
• DTIPrep

Editor Effects

• Window Level Effect

Exporter

• Slicer To Kiwi Exporter

Filtering

Morphology

• Erode Dilate Label

IGT

• Port Placement
• Light Weight Robot IGT
• Gyro Guide
• Corner Annotation
• i Gyne
• Slicer IGT
• Percutaneous Approach Analysis
• Needle Finder
• Tracker Stabilizer
• Resection Planner

Informatics

• Reporting
• Longitudinal PETCT
• Faceted Visualizer
• TCIABrowser
• Curve Maker

Mesh Generation

• CBC 3D I2MConversion
• Cleaver Extension

Microscopy

• IASEM

Multidimensional data

• Multidim Data

Quantification

• Dice Computation
• Pk Modeling

Radiotherapy

• Slicer RT
• Gel Dosimetry Analysis

Registration

• CMFreg
• Segmentation Aided Registration
• PBNRR

Remote

• XNATSlicer

Scoliosis

• Scoliosis

Segmentation

• Open CAD
• Swiss Skull Stripper
• Carrera Slice
• Skull Stripper
• Airway Segmentation
• hough Transform CLI
• LAScar Segmenter
• RSSExtension
• ABC
• MABMIS
• Sobolev Segmenter
• LASegmenter
• Fast Grow Cut Effect
• Intensity Segmenter
• Volume Clip

Shape Analysis

• Model To Model Distance
• Shape Population Viewer
• SPHARM-PDM

Surface Models

• Model Clip

Tractography

• Finsler Tractography
• UKFTractography

Training

• Perk Tutor

Utilities

• Thingiverse Browser

Vascular Modeling Toolkit

• VMTK

Wizards

• Change Tracker

Extensions by contributing organization

54 contributing organizations:

• Asclepios INRIA) and Nikos Chrisochoides (CRTC
• Boston Childrens Hospital
• Brigham and Women's Hospital
• BWH
• BWH & MGH
• BWH, SPL
• BWH/UAB
• CARMA
• College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
• Crisalix
• CRTC
• Department of Neurosurgery, PLA General Hospital, Beijing, China
• Department of Orthodontics, UNC
• GE
• GE GLobal Research
• GT
• Isomics
• Kitware
• LUH
• Massachusetts General Hospital
• Moka Creative LLC, Washington University in St. Louis
• NIRAL, UNC
• Noware
• Orobix
• Perk Lab at Queen's University
• Perk Lab, Queen's
• Perk Lab, Queen's University
• PMH
• Queen's University
• Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
• SBU
• SCI Institute
• Shiga University of Medical Science, Japan
• Shiga University of Medical Science, Japan, SPL
• SPL
• SPL and BWH
• SPL B&W Harvard
• SRI
• Stony Brook University
• Surgical Planning Lab
• UAB
• UIowa
• UNC
• Univ of Michigan
• University College Cork
• University of Bern
• University of Heidelberg
• University of Iowa
• University of Utah
• Utah
• UWA
• Washington University in St. Louis
• yogesh@bwh.harvard.edu

Asclepios INRIA) and Nikos Chrisochoides (CRTC

• PBNRR

Boston Childrens Hospital

• VMTK

Brigham and Women's Hospital

• Erode Dilate Label
• Slicer IGT

BWH

• Change Tracker
• Curve Maker
• Dice Computation
• Fast Grow Cut Effect
• Light Weight Robot IGT
• Open CAD
• Pk Modeling
• RSSExtension
• Segmentation Aided Registration
• Tracker Stabilizer

BWH & MGH

• Carrera Slice

BWH, SPL

• PETDICOMExtension

BWH/UAB

• Segmentation Aided Registration

CARMA

• Cardiac MRI Toolkit

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

• Gyro Guide

Crisalix

• Swiss Skull Stripper

CRTC

• CBC 3D I2MConversion
• PBNRR

Department of Neurosurgery, PLA General Hospital, Beijing, China

• Gyro Guide

Department of Orthodontics, UNC

• Intensity Segmenter

GE

• Faceted Visualizer
• Pk Modeling
• Skull Stripper

GE GLobal Research

• MABMIS

GT

• Carrera Slice

Isomics

• Carrera Slice
• Finsler Tractography
• VMTK
• Slicer To Kiwi Exporter
• XNATSlicer

Kitware

• Change Tracker
• Image Maker
• Matlab Bridge
• Port Placement
• VMTK
• Slicer To Kiwi Exporter

LUH

• Light Weight Robot IGT

Massachusetts General Hospital

• Slicer RT

Moka Creative LLC, Washington University in St. Louis

• XNATSlicer

NIRAL, UNC

• Intensity Segmenter
• Shape Population Viewer

Noware

• Swiss Skull Stripper

Orobix

• VMTK

PerkLab at Queen's University

• Py Dev Remote Debug

PerkLab, Queen's

• Multidim Data

PerkLab, Queen's University

• Gel Dosimetry Analysis
• Matlab Bridge
• Scoliosis
• Slicer RT
• Volume Clip

PMH

• Multidim Data

Queen's University

• Perk Tutor
• Resection Planner
• Slicer IGT

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

• Matlab Bridge
• Slicer RT

SBU

• LAScar Segmenter
• LASegmenter
• RSSExtension

SCI Institute

• Cleaver Extension

Shiga University of Medical Science, Japan

• Corner Annotation

Shiga University of Medical Science, Japan, SPL

• Percutaneous Approach Analysis

SPL

• Change Tracker
• Percutaneous Approach Analysis
• Reporting
• Window Level Effect

SPL and BWH

• TCIABrowser

SPL B&W Harvard

• PBNRR

SRI

• Pk Modeling

Stony Brook University

• Carrera Slice
• Fast Grow Cut Effect

Surgical Planning Lab

• Longitudinal PETCT

UAB

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration
• Sobolev Segmenter

UIowa

• Cardiac Agaston Measures

UNC

• CMFreg
• DTIAtlas Builder
• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Fiber Viewer Light
• MABMIS
• Model To Model Distance
• Port Placement
• SPHARM-PDM

Univ of Michigan

• CMFreg

University College Cork

• Airway Segmentation

University of Bern

• Swiss Skull Stripper

University of Heidelberg

• Longitudinal PETCT

University of Iowa

• PETDICOMExtension

University of Utah

• ABC

Utah

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

UWA

• Thingiverse Browser

Washington University in St. Louis

• XNATSlicer

yogesh@bwh.harvard.edu

• UKFTractography

Extensions by contributing individual

136 contributing individuals:

• Alireza Mehrtash
• Allen Tannenbaum
• Akila Viswanathan
• Alex Yarmarkovich
• Alireza Mehrtash
• Allen Tannenbaum
• Andre Mastmeyer
• Antonio Damato
• Carl-Fredrik Westin
• Carl-Fredrik Westin.
• Christian Baumgartner
• Hans Johnson
• Ipek Oguz
• Ivan Kolesov
• Jan Egger
• Jiashu Zhang
• Kent Williams
• Lauren Barber
• Liangjia Zhu
• Luping Fang
• Martin Styner
• Matt Lougheed
• Matthew S. Holden
• Nabgha Fahrat
• Patricio Vela
• Peter Savadjiev
• Qing Pan
• Ryan Eckbo
• Sam Song
• Sandy Wells
• Tina Kapur
• Tobias Penzkofer
• Xiaojun CHEN
• Xiaojun Chen
• Yi Gao
• Yinpeng Li
• Yundi Shi
• Adrien Kaiser
• Alan Morris
• Alexis Girault
• Alireza Mehrtash
• Allen Tannenbaum
• and Ron Kikinis
• Andinet Enquobahrie
• Andras Lasso
• Andrey Fedorov
• Andriy Fedorov
• Andriy Kot
• Antonio Tristan-Vega
• Arie Nakhmani
• Arnaud Gelas
• Atsushi Yamada
• Beatriz Paniagua
• Bill Lorensen
• Bradley Lowekamp
• Brig Bagley
• Csaba Pinter
• Dan Marcus
• Daniel Haehn
• Danny Perry
• Demian Wasssermann
• Dinggang Shen
• Ethan Ulrich
• Eugene Kholmovski
• Fotis Drakopoulos
• Francois Budin
• Franklin King
• Greg Gardner
• Greg Sharp
• Guillaume Pernelle
• Hans Johnson
• Harini Veeraraghavan
• Ivan Kolesov
• Jayender Jagadeesan
• Jean-Christophe Fillion-Robin
• Jennifer Andrea
• Jessica Forbes
• Jim Miller
• Jonathan Bronson
• Josh Cates
• Julien Finet
• Juliette Pera
• Jun LIN
• Junichi Tokuda
• Karl Fritscher
• Kevin Wang
• Kilian Pohl
• Koichiro Murakami
• Laurent Chauvin
• Liang-Jia Zhu
• Liangjia Zhu
• Luca Antiga
• Luis G. Torres
• Mahnaz Maddah
• Manson Winsauer
• Marcel Prastawa
• Martha Shenton
• Martin Styner
• Matt Lougheed
• Mattea Welch
• Matthew Holden
• Mauricio Reyes
• Ming-ching Chang
• Minjeong Kim
• Nicole Aucoin
• Nigel Goh
• Nikos Chrisochoides
• Olivier Clatz
• Pat Marion
• Paul Mercea
• Pengdong Xiao
• Peter Black
• Peter Karasev
• Pietro Nardelli
• Rick Herrick
• Rob Mac Leod
• Ron Kikinis
• Ruifeng Chen
• Salma Bengali
• Sebastian Tauscher
• Stefan Bauer
• Stefan Lienhard
• Steve Pieper
• Sunil Kumar
• Sylvain Bouix
• Tamas Ungi
• Thomas Fejes
• Vinicius Boen
• Vivek Narayan
• Xiaodong Tao
• Xiaofeng Liu
• Xiaolei Chen
• Yi Gao
• Yingxuan Zhu
• Yixun Liu
• Yogesh Rathi

Alireza Mehrtash

• i Gyne

Allen Tannenbaum

• Fast Grow Cut Effect

Akila Viswanathan

• i Gyne
• Needle Finder

Alex Yarmarkovich

• Finsler Tractography

Alireza Mehrtash

• Needle Finder

Allen Tannenbaum

• Carrera Slice

Andre Mastmeyer

• Needle Finder

Antonio Damato

• i Gyne
• Needle Finder

Carl-Fredrik Westin

• Finsler Tractography

Carl-Fredrik Westin.

• UKFTractography

Christian Baumgartner

• UKFTractography

Hans Johnson

• UKFTractography

Ipek Oguz

• UKFTractography

Ivan Kolesov

• Fast Grow Cut Effect

Jan Egger

• i Gyne
• Needle Finder

Jiashu Zhang

• Gyro Guide

Kent Williams

• UKFTractography

Lauren Barber

• i Gyne
• Needle Finder

Liangjia Zhu

• Carrera Slice

Luping Fang

• Gyro Guide

Martin Styner

• UKFTractography

Matt Lougheed

• Volume Clip

Matthew S. Holden

• Perk Tutor

Nabgha Fahrat

• i Gyne
• Needle Finder

Patricio Vela

• Carrera Slice

Peter Savadjiev

• Finsler Tractography
• UKFTractography

Qing Pan

• Gyro Guide

Ryan Eckbo

• UKFTractography

Sam Song

• i Gyne
• Needle Finder

Sandy Wells

• i Gyne
• Needle Finder

Tina Kapur

• i Gyne
• Needle Finder

Tobias Penzkofer

• i Gyne
• Needle Finder

Xiaojun CHEN

• Model Clip

Xiaojun Chen

• i Gyne
• Needle Finder

Yi Gao

• i Gyne
• Needle Finder

Yinpeng Li

• UKFTractography

Yundi Shi

• UKFTractography

Adrien Kaiser

• DTIAtlas Builder

Alan Morris

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Alexis Girault

• Shape Population Viewer

Alireza Mehrtash

• TCIABrowser

Allen Tannenbaum

• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration
• Sobolev Segmenter

and Ron Kikinis

• Fast Grow Cut Effect

Andinet Enquobahrie

• Port Placement

Andras Lasso

• Matlab Bridge
• Multidim Data
• Py Dev Remote Debug
• Slicer RT
• Tracker Stabilizer
• Volume Clip

Andrey Fedorov

• CBC 3D I2MConversion
• Change Tracker
• Longitudinal PETCT
• PBNRR
• PETDICOMExtension
• Reporting
• TCIABrowser
• Window Level Effect

Andriy Fedorov

• Pk Modeling

Andriy Kot

• PBNRR

Antonio Tristan-Vega

• Finsler Tractography

Arie Nakhmani

• Sobolev Segmenter

Arnaud Gelas

• Swiss Skull Stripper

Atsushi Yamada

• Corner Annotation

Beatriz Paniagua

• Intensity Segmenter
• Model To Model Distance
• SPHARM-PDM

Bill Lorensen

• Swiss Skull Stripper

Bradley Lowekamp

• IASEM

Brig Bagley

• Cleaver Extension

Csaba Pinter

• Gel Dosimetry Analysis
• Slicer RT

Dan Marcus

• XNATSlicer

Daniel Haehn

• VMTK

Danny Perry

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Demian Wasssermann

• Finsler Tractography

Dinggang Shen

• MABMIS

Ethan Ulrich

• PETDICOMExtension

Eugene Kholmovski

• Cardiac MRI Toolkit

Fotis Drakopoulos

• CBC 3D I2MConversion
• PBNRR

Francois Budin

• DTIAtlas Fiber Analyzer
• DTIPrep
• DTIProcess
• Fiber Viewer Light
• Intensity Segmenter
• Model To Model Distance
• SPHARM-PDM

Franklin King

• Scoliosis

Greg Gardner

• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Greg Sharp

• Slicer RT

Guillaume Pernelle

• hough Transform CLI
• i Gyne
• Needle Finder

Hans Johnson

• Cardiac Agaston Measures

Harini Veeraraghavan

• Faceted Visualizer

Ivan Kolesov

• Carrera Slice

Jayender Jagadeesan

• Open CAD
• Tracker Stabilizer

Jean-Christophe Fillion-Robin

• Change Tracker
• Matlab Bridge
• VMTK
• Slicer To Kiwi Exporter

Jennifer Andrea

• Gel Dosimetry Analysis

Jessica Forbes

• Cardiac Agaston Measures

Jim Miller

• MABMIS
• Pk Modeling

Jonathan Bronson

• Cleaver Extension

Josh Cates

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Julien Finet

• Image Maker

Juliette Pera

• Model To Model Distance

Jun LIN

• Model Clip

Junichi Tokuda

• Curve Maker
• Erode Dilate Label
• Light Weight Robot IGT
• Percutaneous Approach Analysis
• Slicer IGT

Karl Fritscher

• Carrera Slice

Kevin Wang

• Matlab Bridge
• Multidim Data
• Slicer RT

Kilian Pohl

• Change Tracker

Koichiro Murakami

• Percutaneous Approach Analysis

Laurent Chauvin

• Dice Computation
• Percutaneous Approach Analysis
• Tracker Stabilizer

Liang-Jia Zhu

• Segmentation Aided Registration

Liangjia Zhu

• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter

Luca Antiga

• VMTK

Luis G. Torres

• Port Placement

Mahnaz Maddah

• Pk Modeling

Manson Winsauer

• CMFreg

Marcel Prastawa

• ABC

Martha Shenton

• RSSExtension

Martin Styner

• SPHARM-PDM

Matt Lougheed

• Resection Planner

Mattea Welch

• Gel Dosimetry Analysis

Matthew Holden

• Multidim Data

Mauricio Reyes

• Swiss Skull Stripper

Ming-ching Chang

• Pk Modeling

Minjeong Kim

• MABMIS

Nicole Aucoin

• Reporting

Nigel Goh

• Thingiverse Browser

Nikos Chrisochoides

• CBC 3D I2MConversion

Olivier Clatz

• PBNRR

Pat Marion

• Slicer To Kiwi Exporter

Paul Mercea

• Longitudinal PETCT

Pengdong Xiao

• Intensity Segmenter

Peter Black

• Change Tracker

Peter Karasev

• Carrera Slice

Pietro Nardelli

• Airway Segmentation

Rick Herrick

• XNATSlicer

Rob MacLeod

• Cardiac MRI Toolkit
• LAScar Segmenter
• LASegmenter
• Segmentation Aided Registration

Ron Kikinis

• Change Tracker
• RSSExtension

Ruifeng Chen

• Gyro Guide

Salma Bengali

• Cardiac MRI Toolkit

Sebastian Tauscher

• Light Weight Robot IGT

Stefan Bauer

• Swiss Skull Stripper

Stefan Lienhard

• UKFTractography

Steve Pieper

• Carrera Slice
• Reporting
• VMTK
• Slicer To Kiwi Exporter
• Window Level Effect
• XNATSlicer

Sunil Kumar

• XNATSlicer

Sylvain Bouix

• RSSExtension
• Segmentation Aided Registration

Tamas Ungi

• Perk Tutor
• Scoliosis
• Slicer IGT

Thomas Fejes

• Swiss Skull Stripper

Vinicius Boen

• CMFreg

Vivek Narayan

• Open CAD

Xiaodong Tao

• Skull Stripper

Xiaofeng Liu

• MABMIS

Xiaolei Chen

• Gyro Guide

Yi Gao

• Carrera Slice
• Fast Grow Cut Effect
• LAScar Segmenter
• LASegmenter
• RSSExtension
• Segmentation Aided Registration

Yingxuan Zhu

• Pk Modeling

Yixun Liu

• CBC 3D I2MConversion
• PBNRR

Yogesh Rathi

• UKFTractography