Documentation/Nightly/Modules/DataProbe

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Introduction and Acknowledgements

Information on NA-MIC can be obtained from the NA-MIC website. Author(s)/Contributor(s): Steve Pieper (Isomics Inc.) and Alireza Mehrtash (BWH). Contact: Steve Pieper, <email>pieper@bwh.harvard.edu</email>

Isomics, Inc.   NA-MIC   Quantitative Image Informatics for Cancer Research

Module Description

Display information about the volume data at the location of the mouse pointer in the Slice views.

Use Cases

Examples:

• Use Case 1: Compare image intensity for two volumes before and after filtering by putting one in the foreground and one in the background.
• Use Case 2: Get a textual description of the label value of a segmented structure.
• Use Case 3: Determine the patient and voxel coordinates of a structure.
• Use Case 4: Control slice view corner text annotations, color scalar bar and interactive ruler.

Panels and their use

The Data probe shows two blocks of data

• The first line displays:
  • color and name of the Slice view that the mouse pointer is currently over
  • the patient-space location corresponding to the mouse pointer in RAS (Right/Anterior/Superior space - see the page on Coordinate Systems for more information)
  • the orientation of the slice view
  • the spacing between slices for the slice view
• The lower block of three lines displays:
  • L, F, or B for Label, Foreground, and Background respectively
  • the name of the volume (or None if nothing is selected)
  • the IJK coordinates corresponding to the mouse pointer (see the page on Coordinate Systems for more information)
  • or Label volumes, the name corresponding to the label value (as defined by the current color table)
  • the value of the volume at that coordinate (a single value for scalar volumes or the number or components for non-scalar volumes)

Slice View Annotations

slice view annotations in use.

slice view annotations settings dialog box.

Similar Modules

Label Statistics

References

N/A

Information for Developers

This module is written in python.