Difference between revisions of "Documentation/4.0/SlicerApplication/SupportedDataFormat"
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(Add more supported models file formats) |
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| + | =File formats supported by Slicer {{documentation/version}}= | ||
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|[[Documentation/{{documentation/version}}/Developers/MRML|Data Model]] | |[[Documentation/{{documentation/version}}/Developers/MRML|Data Model]] | ||
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| − | ! scope="col" colspan="4" style="border-bottom: 1px solid grey;"| Raster Images<br><small>''this includes 2D | + | ! scope="col" colspan="4" style="border-bottom: 1px solid grey;"| Raster Images<br><small>''this includes 2D and 3D images, and more complicated types such as DWI or DTI''</small> |
! scope="col"| [[Documentation/{{documentation/version}}/Modules/Volumes|Volumes]] | ! scope="col"| [[Documentation/{{documentation/version}}/Modules/Volumes|Volumes]] | ||
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| .dcm ... | | .dcm ... | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
| − | |bgcolor="#f34a33" align="center"|no | + | |bgcolor="#f34a33" align="center"|no<ref>Limited support for writing image volumes in DICOM format is provided by the [[Documentation/4.0/Modules/ImageReadDicomWrite|Create DICOM Series]] module</ref> |
|[[Documentation/{{documentation/version}}/Modules/DICOM|DICOM]] | |[[Documentation/{{documentation/version}}/Modules/DICOM|DICOM]] | ||
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| [http://www.grahamwideman.com/gw/brain/analyze/formatdoc.htm Analyze] | | [http://www.grahamwideman.com/gw/brain/analyze/formatdoc.htm Analyze] | ||
| .hdr, .img, .img.gz | | .hdr, .img, .img.gz | ||
| + | |bgcolor="LightGreen" align="center"|yes | ||
| + | |bgcolor="LightGreen" align="center"|yes | ||
| + | | | ||
| + | |- | ||
| + | | [http://nifti.nimh.nih.gov/nifti-1/ NifTI] | ||
| + | | .nia, .nii, .nii.gz | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
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| LSM | | LSM | ||
| .lsm | | .lsm | ||
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| − | |||
| − | |||
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| − | |||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
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| Text | | Text | ||
| .txt | | .txt | ||
| + | |bgcolor="LightGreen" align="center"|yes | ||
| + | |bgcolor="LightGreen" align="center"|yes | ||
| + | | | ||
| + | |- | ||
| + | ! scope="col" colspan="4" style="border-bottom: 1px solid grey;"| Lookup tables | ||
| + | ! scope="col"| [[Documentation/{{documentation/version}}/Modules/Colors|Colors]] | ||
| + | |- | ||
| + | | [[Documentation/{{documentation/version}}/Modules/Colors#File_format|Text]] | ||
| + | | .txt, .ctbl | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
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|} | |} | ||
| − | + | <references/> | |
=References= | =References= | ||
* [http://www.vtk.org/Wiki/ITK_File_Formats ITK File Formats] | * [http://www.vtk.org/Wiki/ITK_File_Formats ITK File Formats] | ||
Latest revision as of 07:36, 14 June 2013
Home < Documentation < 4.0 < SlicerApplication < SupportedDataFormat
|
For the latest Slicer documentation, visit the read-the-docs. |
File formats supported by Slicer 4.0
| Format | Extensions | Read | Write | Module |
|---|---|---|---|---|
| Scenes | Data | |||
| MRML | .mrml | yes | yes | Data Model |
| Raster Images this includes 2D and 3D images, and more complicated types such as DWI or DTI |
Volumes | |||
| DICOM | .dcm ... | yes | no[1] | DICOM |
| NRRD | .nrrd, .nhdr | yes | yes | |
| MetaImage | .mhd, .mha | yes | yes | |
| VTK | .vtk | yes | yes | |
| Analyze | .hdr, .img, .img.gz | yes | yes | |
| NifTI | .nia, .nii, .nii.gz | yes | yes | |
| BMP | .bmp | yes | yes | |
| BioRad | .pic | yes | yes | |
| Brains2 | .mask | yes | yes | |
| GIPL | .gipl .gipl.gz | yes | yes | |
| JPEG | .jpg, .jpeg | yes | yes | |
| LSM | .lsm | yes | yes | |
| PNG | .png | yes | yes | |
| Stimulate | .spr | yes | yes | |
| TIFF | .tif, .tiff | yes | yes | |
| MGH-NMR | .mgz | yes | yes | |
| Models | Models | |||
| VTK Polygonal Data | .vtk | yes | yes | |
| VTK XML Polygonal Data | .vtp | yes | yes | |
| STL | .stl | yes | yes | |
| OBJ | .obj | yes | no | |
| Others (to be tested) | .g, .byu, .orig, .inflated, .sphere, .white, .smoothwm, .pial | yes | no | |
| Fiducials | Annotations | |||
| CSV | .fcsv | yes | yes | |
| Text | .txt | yes | yes | |
| Transforms | Transforms | |||
| Transform | .tfm, .mat | yes | yes | |
| Text | .txt | yes | yes | |
| Transfer Functions | Volume Rendering | |||
| Volume Rendering properties | .vp | yes | yes | |
| Text | .txt | yes | yes | |
| Lookup tables | Colors | |||
| Text | .txt, .ctbl | yes | yes | |
- ↑ Limited support for writing image volumes in DICOM format is provided by the Create DICOM Series module
