Difference between revisions of "User:UpdateBot/Issue-2843-Consolidated-Extension-List"
From Slicer Wiki
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
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| Line 10: | Line 10: | ||
= Modules by name = | = Modules by name = | ||
156 modules: | 156 modules: | ||
| − | * [http://www.nitrc.org/projects/abc ABC] | + | * [http://www.nitrc.org/projects/abc ABC] <small>(bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> |
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]] | * [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]] | ||
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]] | * [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]] | ||
| Line 17: | Line 17: | ||
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]] | * [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]] | ||
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] | ||
| − | * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] | + | * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] | * [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] | ||
* BRAINSDWICleanup | * BRAINSDWICleanup | ||
| Line 26: | Line 26: | ||
* BRAINSROIAuto | * BRAINSROIAuto | ||
* BRAINSTransform Convert | * BRAINSTransform Convert | ||
| − | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]] | * [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]] | ||
| − | * [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]] | + | * [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]] <small>(bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] | * [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] | ||
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]] | * [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]] | ||
* [[Documentation/Nightly/Modules/Colors|Colors]] | * [[Documentation/Nightly/Modules/Colors|Colors]] | ||
| − | * [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] | + | * [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] | + | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] | * [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] | ||
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] | * [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] | ||
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] | * [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] | ||
| − | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
* [[Documentation/Nightly/Modules/Data|Data]] | * [[Documentation/Nightly/Modules/Data|Data]] | ||
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]] | * [[Documentation/Nightly/Modules/DataProbe|Data Probe]] | ||
* [[Documentation/Nightly/Modules/DataStore|Data Store]] | * [[Documentation/Nightly/Modules/DataStore|Data Store]] | ||
| − | * [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] | + | * [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] <small>(bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* [[Documentation/Nightly/Modules/DICOM|DICOM]] | * [[Documentation/Nightly/Modules/DICOM|DICOM]] | ||
* DICOM2Full Brain Tractography | * DICOM2Full Brain Tractography | ||
| Line 47: | Line 47: | ||
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] | * [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] | ||
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] | ||
| − | * [[Documentation/Nightly/Modules/Downsize|Downsize]] | + | * [[Documentation/Nightly/Modules/Downsize|Downsize]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
* DWIConvert | * DWIConvert | ||
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] | * [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] | ||
| Line 60: | Line 60: | ||
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] | ||
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] | * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] | ||
| − | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] | + | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] <small>(bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
| − | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
* Fiber Bundle Label Select | * Fiber Bundle Label Select | ||
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] | * [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] | ||
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] | * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] | ||
| − | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] | + | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] | + | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] <small>(bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] | * [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] | ||
| − | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> |
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] | * [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] | ||
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] | * [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] | ||
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] | * [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] | ||
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] | * [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] | ||
| − | * [[Documentation/Nightly/Modules/Growing|Growing]] | + | * [[Documentation/Nightly/Modules/Growing|Growing]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]] | + | * [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]] <small>(bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] | * [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] | ||
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] | ||
| Line 80: | Line 80: | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] | ||
| − | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] | + | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] <small>(bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small> |
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]] | * [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]] | ||
| − | * [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] | + | * [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] | + | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| − | * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] | + | * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]] | + | * [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] | * [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] | ||
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] | ||
* [[Documentation/Nightly/Modules/LabelStatistics|Label Statistics]] | * [[Documentation/Nightly/Modules/LabelStatistics|Label Statistics]] | ||
| − | * [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]] | + | * [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] | + | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] | + | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* [[Documentation/Nightly/Modules/Markups|Markups]] | * [[Documentation/Nightly/Modules/Markups|Markups]] | ||
| − | * [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] | + | * [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] | * [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] | ||
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] | * [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] | ||
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]] | * [[Documentation/Nightly/Modules/MergeModels|Merge Models]] | ||
| − | * [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] | + | * [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] <small>(bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] | ||
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] | * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] | ||
| Line 108: | Line 108: | ||
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] | * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] | ||
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] | * [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] | ||
| − | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] | + | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] <small>(bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] | + | * [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] <small>(bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]] | * [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]] | ||
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] | * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] | ||
| − | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] | + | * [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* Perform Metric Test | * Perform Metric Test | ||
| − | * [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] | + | * [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] <small>(bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] | * [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] | ||
| − | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] | + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/PortPlacement|Port Placement]] | + | * [[Documentation/Nightly/Modules/PortPlacement|Port Placement]] <small>(bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]] | * [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]] | ||
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]] | * [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]] | ||
* [[Documentation/Nightly/Modules/Reformat|Reformat]] | * [[Documentation/Nightly/Modules/Reformat|Reformat]] | ||
| − | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] | + | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] <small>(bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> |
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] | * [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] | ||
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] | * [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] | ||
| Line 129: | Line 129: | ||
* [[Documentation/Nightly/Modules/SampleData|Sample Data]] | * [[Documentation/Nightly/Modules/SampleData|Sample Data]] | ||
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]] | * [[Documentation/Nightly/Modules/SceneViews|Scene Views]] | ||
| − | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] | ||
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]] | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] | ||
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] | * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] | ||
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] | * [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] | ||
| − | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | + | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] | ||
| − | * [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] | + | * [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small> |
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]] | * [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]] | ||
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] | * [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] | ||
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]] | * [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]] | ||
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]] | * [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]] | ||
| − | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] | + | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]] | + | * [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] | + | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] <small>(bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] | + | * [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] | * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] | ||
| − | * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]] | + | * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] | * [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] | ||
* Tractography Interactive Seeding | * Tractography Interactive Seeding | ||
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] | * [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] | ||
| − | * [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] | + | * [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] <small>(bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
* [[Documentation/Nightly/Modules/Transforms|Transforms]] | * [[Documentation/Nightly/Modules/Transforms|Transforms]] | ||
* [[Documentation/Nightly/Modules/Units|Units]] | * [[Documentation/Nightly/Modules/Units|Units]] | ||
| Line 163: | Line 163: | ||
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] | * [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] | ||
* [[Documentation/Nightly/Modules/Welcome|Welcome]] | * [[Documentation/Nightly/Modules/Welcome|Welcome]] | ||
| − | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] | + | * [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] | ||
= Modules by category = | = Modules by category = | ||
Revision as of 22:20, 4 December 2014
- Modules by name
- Modules by category
- Modules by contributing organization
- Modules by contributing individual
- Extensions by name
- Extensions by category
- Extensions by contributing organization
- Extensions by contributing individual
Modules by name
156 modules:
- ABC (bundled in ABC extension)
- ACPCTransform
- Add Scalar Volumes
- Airway Segmentation CLI
- Annotations
- Apply Matrix
- Bin Shrink
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp
- BRAINSDWICleanup
- BRAINSFit
- BRAINSLabel Stats
- BRAINSResample
- BRAINSResize
- BRAINSROIAuto
- BRAINSTransform Convert
- Carrera Slice (bundled in Carrera Slice extension)
- Cast Scalar Volume
- Change Tracker (bundled in Change Tracker extension)
- Checker Board Filter
- Cleaver CLI
- Colors
- Compare Volumes (bundled in CMFreg extension)
- Corner Annotation (bundled in Corner Annotation extension)
- Create DICOMSeries
- Crop Volume
- Curvature Anisotropic Diffusion
- Curve Maker (bundled in Curve Maker extension)
- Data
- Data Probe
- Data Store
- Dice Computation (bundled in Dice Computation extension)
- DICOM
- DICOM2Full Brain Tractography
- Diffusion Tensor Scalar Measurements
- Diffusion Weighted Volume Masking
- Dilate Label
- Downsize (bundled in CMFreg extension)
- DWIConvert
- DWIJoint Rician LMMSEFilter
- DWIRician LMMSEFilter
- DWITo DTIEstimation
- Editor
- EMSegment
- EMSegment Command Line
- EMSegment Quick
- EMSegment Transform To New Format
- Endoscopy
- Erode Label
- Extract Skeleton
- Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
- Fiber Bundle Label Select
- Fiber Bundle To Label Map
- Fiducial Registration
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter
- Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Growing (bundled in CMFreg extension)
- Gyro Guide (bundled in Gyro Guide extension)
- Histogram Matching
- IASEMImport
- IASEMImport Series
- IGR3D MABMIS Testing
- IGR3D MABMIS Training
- i Gyne (bundled in i Gyne extension)
- Image Label Combine
- Intensity Difference Metric (bundled in Change Tracker extension)
- Intensity Segmenter (bundled in Intensity Segmenter extension)
- KUtil (bundled in Carrera Slice extension)
- Label Addition (bundled in CMFreg extension)
- Label Extraction (bundled in CMFreg extension)
- Label Map Smoothing
- Label Object Statistics
- Label Statistics
- Label To DICOMSEGConverter (bundled in Reporting extension)
- Landmark Registration (bundled in CMFreg extension)
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
- Markups
- Mask Creation (bundled in CMFreg extension)
- Mask Scalar Volume
- Median Image Filter
- Merge Models
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- Metafile Importer
- Model Maker
- Models
- Model To Label Map
- Multiply Scalar Volumes
- Multi Volume Explorer
- Multi Volume Importer
- N4ITKBias Field Correction
- Needle Finder (bundled in Needle Finder extension)
- Non Growing (bundled in CMFreg extension)
- Open IGTLink IF
- Orient Scalar Volume
- PBNRR (bundled in PBNRR extension)
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
- Perform Metric Test
- Perk Evaluator (bundled in Perk Tutor extension)
- PETStandard Uptake Value Computation
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Pk Modeling (bundled in Pk Modeling extension)
- Port Placement (bundled in Port Placement extension)
- Probe Volume With Model
- Python Metrics Calculator
- Reformat
- Reporting (bundled in Reporting extension)
- Resample DTIVolume
- Resample Scalar Vector DWIVolume
- Robust Statistics Segmenter
- Sample Data
- Scene Views
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
- Sequence Browser
- Sequences
- Simple Filters
- Simple Region Growing Segmentation
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
- Sobolev Segmenter (bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion
- Spinal Curvature Measurement (bundled in Scoliosis extension)
- Subject Hierarchy
- Subtract Scalar Volumes
- Surface Registration
- Surface Toolbox
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
- TCIABrowser (bundled in TCIABrowser extension)
- Thingiverse Browser (bundled in Thingiverse Browser extension)
- Threshold Scalar Volume
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
- Tractography Display
- Tractography Interactive Seeding
- Tractography Label Map Seeding
- Transform Recorder (bundled in Perk Tutor extension)
- Transforms
- Units
- VBRAINSDemon Warp
- Vector To Scalar Volume
- View Controllers
- Volume Clip With Model
- Volume Clip With Roi
- Volume Rendering
- Volumes
- Voting Binary Hole Filling Image Filter
- Welcome
- Window Level Effect (bundled in Window Level Effect extension)
- Workflow Segmentation (bundled in Perk Tutor extension)
- Xnat Slicer
Modules by category
30 categories:
- BRAINS
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Endoscopy
- Examples
- Exporter
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multidimensional data
- Multi Volume Support
- Perk Tutor
- Quantification
- Registration
- Segmentation
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Wizards
- Work in Progress
- XNATSlicer
BRAINS
LabelStatistics
- BRAINSLabel Stats
CMF Registration
- Apply Matrix
- Landmark Registration (bundled in CMFreg extension)
- Surface Registration
- Label Extraction (bundled in CMFreg extension)
- Label Addition (bundled in CMFreg extension)
- Downsize (bundled in CMFreg extension)
Voxelbase Registration
- Growing (bundled in CMFreg extension)
- Mask Creation (bundled in CMFreg extension)
- Non Growing (bundled in CMFreg extension)
Converters
Developer Tools
- Event Broker
- Double Arrays
- Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)
- Cameras
- Extension Wizard
- Execution Model Tour
- Image Maker (bundled in Image Maker extension)
DICOM Plugins
- DICOMRWVMPlugin
- DICOMLongitudinal PETCTPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- DICOMDiffusion Volume Plugin
- DICOMSegmentation Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions
- Binary Watershed Effect
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
- Carrera Slice Effect (bundled in Carrera Slice extension)
- Double Threshold Effect
Matlab
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Matlab Commander (bundled in Matlab Bridge extension)
Diffusion
- Tractography Display
- DICOM2Full Brain Tractography
Diffusion Data Conversion
- DWIConvert
Diffusion Tensor Images
- Resample DTIVolume
- Diffusion Tensor Scalar Measurements
- Tractography Label Map Seeding
- Tractography Interactive Seeding
Diffusion Weighted Images
- DWIRician LMMSEFilter
- DWIJoint Rician LMMSEFilter
- DWITo DTIEstimation
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Resample Scalar Vector DWIVolume
- Finsler Tractography (bundled in Finsler Tractography extension)
- Diffusion Weighted Volume Masking
Tractography
- Fiber Bundle To Label Map
- Fiber Bundle Label Select
Editor Effects
- Window Level Effect (bundled in Window Level Effect extension)
Endoscopy
Examples
- Carrera Slice (bundled in Carrera Slice extension)
- Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Exporter
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
Filtering
- Extract Skeleton
- Threshold Scalar Volume
- N4ITKBias Field Correction
- Simple Filters
- Image Label Combine
- Voting Binary Hole Filling Image Filter
- Histogram Matching
- Checker Board Filter
Arithmetic
- Multiply Scalar Volumes
- Add Scalar Volumes
- Cast Scalar Volume
- Subtract Scalar Volumes
- Mask Scalar Volume
Denoising
- Gradient Anisotropic Diffusion
- Median Image Filter
- Gaussian Blur Image Filter
- Curvature Anisotropic Diffusion
Morphology
IGT
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
- Port Placement (bundled in Port Placement extension)
- Open IGTLink IF
- Needle Finder (bundled in Needle Finder extension)
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
- Gyro Guide (bundled in Gyro Guide extension)
- i Gyne (bundled in i Gyne extension)
- Corner Annotation (bundled in Corner Annotation extension)
Informatics
- Annotations
- Markups
- Units
- DICOM
- Sample Data
- Subject Hierarchy
- Data
- Colors
- Curve Maker (bundled in Curve Maker extension)
- TCIABrowser (bundled in TCIABrowser extension)
Legacy
Converters
Diffusion
Denoising
Diffusion Data Conversion
- DTIimport
- DTIexport
Filtering
Registration
- Test Grid Transform Registration
- Expert Automated Registration
Work in Progress
Diffusion Tensor
Test
- Diffusion Tensor Test
Mesh Generation
MeshGeneration
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
Microscopy
Multidimensional data
MultiVolume Support
Perk Tutor
- Python Metrics Calculator
- Workflow Segmentation (bundled in Perk Tutor extension)
- Transform Recorder (bundled in Perk Tutor extension)
- Perk Evaluator (bundled in Perk Tutor extension)
Quantification
- PETStandard Uptake Value Computation
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- Spinal Curvature Measurement (bundled in Scoliosis extension)
- Pk Modeling (bundled in Pk Modeling extension)
- Label Statistics
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Dice Computation (bundled in Dice Computation extension)
- Data Probe
ChangeQuantification
- Intensity Difference Metric (bundled in Change Tracker extension)
Registration
- BRAINSResample
- Transforms
- BRAINSResize
- Perform Metric Test
- BRAINSFit
- PBNRR (bundled in PBNRR extension)
Specialized
- ACPCTransform
- Fiducial Registration
- VBRAINSDemon Warp
- BRAINSDemon Warp
- Reformat
Segmentation
- Editor
- EMSegment Quick
- Simple Region Growing Segmentation
- EMSegment
- Volume Clip With Roi
- Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
- Airway Segmentation CLI
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Sobolev Segmenter (bundled in Sobolev Segmenter extension)
- Volume Clip With Model
- IGR3D MABMIS Testing
- ABC (bundled in ABC extension)
- IGR3D MABMIS Training
- Intensity Segmenter (bundled in Intensity Segmenter extension)
Specialized
- EMSegment Command Line
- Robust Statistics Segmenter
- BRAINSROIAuto
Slicelets
- Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
Surface Models
- Model To Label Map
- Merge Models
- Surface Toolbox
- Probe Volume With Model
- Grayscale Model Maker
- Label Map Smoothing
- Model Maker
Testing
- Self Tests
- CLIROITest
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring
- Performance Tests
- Slicer MRBTest
TestCases
- Slice Link Logic
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close
- test tractography display
- Subject Hierarchy Core Plugins Self Test
- slicer Close Crash Bug2590
- Subject Hierarchy Generic Self Test
- Charting
- Scene Performance
- Markups In Compare Viewers Self Test
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Neurosurgical Planning Tutorial Markups Self Test
- Colors Scalar Bar Self Test
- Markups In Views Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- View Controllers Slice Interpolation Bug1926
- Slicer4Minute
- label Toggle Bug2049
Unspecified
- BRAINSDWICleanup
Utilities
- Thingiverse Browser (bundled in Thingiverse Browser extension)
- EMSegment Transform To New Format
- Data Store
BRAINS
- BRAINSTransform Convert
Wizards
- Compare Volumes (bundled in CMFreg extension)
- Change Tracker (bundled in Change Tracker extension)
Work in Progress
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
Converters
- Label To DICOMSEGConverter (bundled in Reporting extension)
Informatics
TestCases
- Reporting Self Test
- Label To DICOMSEGConverter Self Test
XNATSlicer
Modules by contributing organization
62 contributing organizations:
- Asclepios INRIA
- AZE R&D
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- BWH/UAB
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Institute of Technology
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, Inc.
- Isomics, pieper@isomics.com
- Kitware
- Kitware)
- MGH
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MSC/NLM
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan, SPL
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- Stony Brook University
- SUMS
- Surgical Planning Lab
- UAB
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University College Cork
- University of Alabama Birmingham
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
- JRC2013Vis
Brigham and Women's Hospital
- Corner Annotation (bundled in Corner Annotation extension)
- Surface Toolbox
- test tractography display
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Colors Scalar Bar Self Test
- Curve Maker (bundled in Curve Maker extension)
- Dice Computation (bundled in Dice Computation extension)
- DICOMRWVMPlugin
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
- Fiducial Layout Switch Bug1914
- Markups
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
- Volume Rendering Scene Close
- Window Level Effect (bundled in Window Level Effect extension)
BWH, SPL
BWH, SUMS
- Corner Annotation (bundled in Corner Annotation extension)
BWH/UAB
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- Gyro Guide (bundled in Gyro Guide extension)
CRTC
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- PBNRR (bundled in PBNRR extension)
gatech
GE
- Add Scalar Volumes
- Charting
- Checker Board Filter
- Create DICOMSeries
- Curvature Anisotropic Diffusion
- Diffusion Tensor Test
- DWIConvert
- Execution Model Tour
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Histogram Matching
- Label Map Smoothing
- Median Image Filter
- Model Maker
- Model To Label Map
- Multiply Scalar Volumes
- Orient Scalar Volume
- Otsu Threshold Image Filter
- Pk Modeling (bundled in Pk Modeling extension)
- Resample Scalar Volume
- Simple Region Growing Segmentation
- Slice Link Logic
- Slicer4Minute
- Spacing Aware Curvature Diffusion
- Subtract Scalar Volumes
- View Controllers
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter
Georgia Institute of Technology
- Carrera Slice Effect (bundled in Carrera Slice extension)
Georgia Tech
- Carrera Slice (bundled in Carrera Slice extension)
IBM
Isomics
- Atlas Tests
- Binary Watershed Effect
- Compare Volumes (bundled in CMFreg extension)
- Data
- Data Probe
- DICOM
- Editor
- Endoscopy
- fiber visibility crash2438
- Fiber Bundle To Label Map
- Label Statistics
- label Toggle Bug2049
- Landmark Registration (bundled in CMFreg extension)
- Models
- Performance Tests
- Reporting (bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data
- scene Import2428
- Self Tests
- Simple Filters
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
- Tractography Interactive Seeding
- Transforms
- Vector To Scalar Volume
- View Controllers
- Volume Rendering
- Volumes
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, Inc.
- Carrera Slice Effect (bundled in Carrera Slice extension)
Isomics, pieper@isomics.com
Kitware
- Cameras
- Colors
- Data
- Data Store
- Double Arrays
- Event Broker
- Expert Automated Registration
- Extension Wizard
- Extract Skeleton
- Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
- fiber visibility crash2438
- Fiducial Registration
- Gaussian Blur Image Filter
- Image Maker (bundled in Image Maker extension)
- label Toggle Bug2049
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Models
- Multi Volume Explorer
- Multi Volume Importer
- Port Placement (bundled in Port Placement extension)
- Reformat
- Sample Data
- Scene Performance
- Simple Filters
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
- Threshold Scalar Volume
- Tractography Display
- Transforms
- Units
- View Controllers
- Volume Rendering
- Volumes
- Welcome
Kitware)
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
MGH
- Pk Modeling (bundled in Pk Modeling extension)
Moka Creative, LLC, kumar.sunil.p@gmail.com
MSC/NLM
Noware
- Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
Orobix
PerkLab at Queen's University
- Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)
PerkLab, Queen's
PerkLab, Queen's University
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Volume Clip With Model
PMH
- Colors Scalar Bar Self Test
- Sequence Browser
- Sequences
Queen's
- Data
- Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
- Subject Hierarchy
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
Queen's University
- Perk Evaluator (bundled in Perk Tutor extension)
- Python Metrics Calculator
- Scoliosis Monitoring
- Spinal Curvature Measurement (bundled in Scoliosis extension)
- Transform Recorder (bundled in Perk Tutor extension)
- Volume Clip With Roi
- Workflow Segmentation (bundled in Perk Tutor extension)
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
SAIC-Frederick, NCI-Frederick
SBU
- LAScar Segmenter (bundled in LAScar Segmenter extension)
SCI Institute
Shiga University of Medical Science, Japan, SPL
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
SNR
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
SPL
- DICOM2Full Brain Tractography
- Label To DICOMSEGConverter Self Test
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
- Pk Modeling (bundled in Pk Modeling extension)
- Reporting Self Test
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
SPL B&W Harvard
SPL, BWH
- ACPCTransform
- Annotations
- BSpline To Deformation Field
- Cast Scalar Volume
- Colors
- Data
- Diffusion Tensor Scalar Measurements
- Diffusion Weighted Volume Masking
- DTIexport
- DTIimport
- DWITo DTIEstimation
- Fiducial Registration
- Grayscale Model Maker
- Image Label Combine
- Mask Scalar Volume
- Merge Models
- Model Maker
- Models
- Model To Label Map
- Multi Volume Explorer
- Multi Volume Importer
- N4ITKBias Field Correction
- PETStandard Uptake Value Computation
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Probe Volume With Model
- Reporting (bundled in Reporting extension)
- Robust Statistics Segmenter
- Scene Views
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- TCIABrowser (bundled in TCIABrowser extension)
- Test Grid Transform Registration
- Threshold Scalar Volume
- Tractography Label Map Seeding
- View Controllers
- Volume Rendering
- Volumes
- Welcome
SPL, BWH, UPenn
Stony Brook University
- Carrera Slice Effect (bundled in Carrera Slice extension)
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
SUMS
- Corner Annotation (bundled in Corner Annotation extension)
Surgical Planning Lab
- Label To DICOMSEGConverter (bundled in Reporting extension)
UAB
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (bundled in Sobolev Segmenter extension)
Uiowa
- DWIConvert
UIowa
- DWIConvert
UNC
- DWIRician LMMSEFilter
- Extract Skeleton
- Intensity Segmenter (bundled in Intensity Segmenter extension)
- Port Placement (bundled in Port Placement extension)
- Resample DTIVolume
- Resample Scalar Vector DWIVolume
Univ of Michigan
Univ. of Iowa
University College Cork
University of Alabama Birmingham
- Carrera Slice Effect (bundled in Carrera Slice extension)
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
University of Heidelberg
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
University of Iowa
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
University of Iowa) and Andrey Fedorov (SPL
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
UPenn
- Annotations
- EMSegment
- N4ITKBias Field Correction
- Scene Views
Utah
- Label Map Smoothing
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
UVa
UWA
- Thingiverse Browser (bundled in Thingiverse Browser extension)
WashU-St. Louis, dmarcus@wustl.edu
while at GE
- Pk Modeling (bundled in Pk Modeling extension)
Modules by contributing individual
163 contributing individuals:
- Alex Yarmarkovich
- Ali Ghayoor
- Allen Tannenbaum
- and Hans Johnson.
- Beatriz Paniagua from Department of Orthodontics
- Brad Davis
- BWH
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Daniel Haehn
- Demian Wassermann
- Dinggang Shen
- Francois Budin
- Greg Harris
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- Ivan Kolesov
- Kilian Pohl
- Lauren O'Donnell
- Liangjia Zhu
- Luping Fang
- Matt Lougheed
- Neuro Image Resarch and Analysis Laboratory
- Patricio Vela
- Peter Karasev
- Peter Savadjiev
- Polina Golland
- Qing Pan
- the University of North Carolina at Chapel Hill
- UNC Medical School
- Uof M School of Dentistry
- Uof M School Of Dentistry
- Xiaofeng Liu
- Yumin Yuan
- Akila Viswanathan
- Alan Morris
- Alex Yarmakovich
- Alex Yarmarkovich
- Ali Ghayoor
- Alireza Mehrtash
- Allen Tannenbaum
- and Ron Kikinis
- and Steve Pieper
- Andinet Enquobahrie
- Andras Lasso
- Andreas Freudling
- Andrey Fedorov
- Andriy Kot
- Anonymous
- Antonio Damato
- Antonio Tristan Vega
- Arie Nakhmani
- Atsushi Yamada
- Benjamin Long
- Bill Lorensen
- Bradley Lowekamp
- Bradley Lowekamp and Bill Lorensen
- Casey B Goodlett
- Charles Marion
- Csaba Pinter
- Dan Marcus
- Daniel Blezek
- Daniel Haehn
- Danny Perry
- Demian Wassermann
- Dirk Padfield
- Dominik Meier
- Ethan Ulrich
- Fotis Drakopoulos
- Francois Budin
- Franklin King
- Greg Gardner
- Guido Gerig
- Guillaume Pernelle
- Hans J. Johnson
- Hans Johnson
- Ivan Kolesov
- Jan Egger
- Jayender Jagadeesan
- Jean-Baptiste Berger
- Jean-Christophe Fillion-Robin
- Jim Miller
- Johan Andruejol
- John Evans
- Jonathan Bronson
- Josh Cates
- Joy Matsui
- Julien Finet
- Julien Jomier
- Junichi Tokuda
- Kent Williams
- Kevin Wang
- Kilian Pohl
- Koichiro Murakami
- Lauren Barber
- Lauren O'Donnell
- Laurent Chauvin
- Liang-Jia Zhu
- Liangjia Zhu
- Luca Antiga
- Luis G. Torres
- Marc Niethammer
- Marcel Prastawa prastawa@sci.utah.edu
- Mark Scully
- Markus Van Tol
- Martin Styner
- Matthew Holden
- Matthew S. Holden
- Matthew Woehlke
- Michael Jeulin-Lagarrigue
- Minjeong Kim
- Nabgha Fahrat
- Nicholas Herlambang
- Nick Tustison
- Nicole Aucoin
- Nigel Goh
- Nikos Chrisochoides
- Olivier Clatz
- Pat Marion
- Paul Mercea
- Pengdong Xiao
- Peter Black
- Peter Karasev
- Pierre Seroul
- Pietro Nardelli
- Raul San Jose
- Rob Mac Leod
- Ron Kikinis
- Ross Whitaker
- Ruifeng Chen
- Sam Song
- Sandy Wells
- Santiago Aja Fernandez
- Sebastien Barré
- Sebastien Barre
- Shigeyuki Naka
- Soichiro Tani
- Sonia Pujol
- Stephen Aylward
- Stephen R Aylward
- Steve Pieper
- Sunil Kumar
- Sylvain Bouix
- Tamas Ungi
- This tool was developed by Hans J. Johnson and Greg Harris.
- This tool was developed by Hans Johnson.
- This tool was developed by Kent Williams.
- This tool was developed by Vincent Magnotta
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani
- Vince Magnotta
- Vincent A. Magnotta
- Vinicius Boen
- Vinicius Boen and Mason Winsauer
- Wendy Plesniak
- Xiaodong Tao
- Xiaojun Chen
- Yanling Liu
- Yi Gao
- Yinglin Lee
- Yingxuan Zhu
- Yixun Liu
- Yong Zhang
Alex Yarmarkovich
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
Ali Ghayoor
- BRAINSTransform Convert
Allen Tannenbaum
- Carrera Slice Effect (bundled in Carrera Slice extension)
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
and Hans Johnson.
Beatriz Paniagua from Department of Orthodontics
- Intensity Segmenter (bundled in Intensity Segmenter extension)
Brad Davis
- EMSegment Command Line
BWH
- DICOMSegmentation Plugin
- Multi Volume Importer Plugin
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
Daniel Haehn
- EMSegment Command Line
Demian Wassermann
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
Dinggang Shen
Francois Budin
- Intensity Segmenter (bundled in Intensity Segmenter extension)
Greg Harris
hans-johnson -at- uiowa.edu
- BRAINSFit
- BRAINSROIAuto
http://www.psychiatry.uiowa.edu
- BRAINSFit
- BRAINSROIAuto
Ivan Kolesov
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
Kilian Pohl
- EMSegment
- EMSegment Command Line
Lauren O'Donnell
- Fiber Bundle Label Select
Liangjia Zhu
- Carrera Slice Effect (bundled in Carrera Slice extension)
Luping Fang
- Gyro Guide (bundled in Gyro Guide extension)
Matt Lougheed
Neuro Image Resarch and Analysis Laboratory
- Apply Matrix
- Downsize (bundled in CMFreg extension)
- Growing (bundled in CMFreg extension)
- Label Addition (bundled in CMFreg extension)
- Label Extraction (bundled in CMFreg extension)
- Mask Creation (bundled in CMFreg extension)
- Non Growing (bundled in CMFreg extension)
Patricio Vela
- Carrera Slice Effect (bundled in Carrera Slice extension)
Peter Karasev
- Carrera Slice (bundled in Carrera Slice extension)
Peter Savadjiev
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
Polina Golland
- EMSegment Command Line
Qing Pan
- Gyro Guide (bundled in Gyro Guide extension)
the University of North Carolina at Chapel Hill
- Intensity Segmenter (bundled in Intensity Segmenter extension)
UNC Medical School
- Apply Matrix
- Downsize (bundled in CMFreg extension)
- Growing (bundled in CMFreg extension)
- Label Addition (bundled in CMFreg extension)
- Label Extraction (bundled in CMFreg extension)
- Mask Creation (bundled in CMFreg extension)
- Non Growing (bundled in CMFreg extension)
UofM School of Dentistry
- Apply Matrix
- Downsize (bundled in CMFreg extension)
- Label Addition (bundled in CMFreg extension)
- Label Extraction (bundled in CMFreg extension)
- Mask Creation (bundled in CMFreg extension)
- Non Growing (bundled in CMFreg extension)
UofM School Of Dentistry
Xiaofeng Liu
Yumin Yuan
- EMSegment Command Line
Akila Viswanathan
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Alan Morris
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Alex Yarmakovich
- Models
- Tractography Interactive Seeding
Alex Yarmarkovich
Ali Ghayoor
- Perform Metric Test
Alireza Mehrtash
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
- TCIABrowser (bundled in TCIABrowser extension)
Allen Tannenbaum
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Robust Statistics Segmenter
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (bundled in Sobolev Segmenter extension)
and Ron Kikinis
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
and Steve Pieper
- Carrera Slice Effect (bundled in Carrera Slice extension)
Andinet Enquobahrie
- Port Placement (bundled in Port Placement extension)
Andras Lasso
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Metafile Importer
- Py Dev Remote Debug (bundled in Py Dev Remote Debug extension)
- Sequence Browser
- Sequences
- Transforms
- Volume Clip With Model
- Volume Clip With Roi
Andreas Freudling
Andrey Fedorov
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- BSpline To Deformation Field
- Change Tracker (bundled in Change Tracker extension)
- Change Tracker Self Test
- Crop Volume
- DICOMRWVMPlugin
- DICOMSegmentation Plugin
- Intensity Difference Metric (bundled in Change Tracker extension)
- Label To DICOMSEGConverter (bundled in Reporting extension)
- Label To DICOMSEGConverter Self Test
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- Multi Volume Explorer
- Multi Volume Importer
- Multi Volume Importer Plugin
- N4ITKBias Field Correction
- PBNRR (bundled in PBNRR extension)
- Pk Modeling (bundled in Pk Modeling extension)
- Reporting (bundled in Reporting extension)
- Reporting Self Test
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- TCIABrowser (bundled in TCIABrowser extension)
- Window Level Effect (bundled in Window Level Effect extension)
Andriy Kot
Anonymous
- CLIROITest
- EMSegment Transform To New Format
Antonio Damato
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter
- DWIRician LMMSEFilter
- DWIUnbiased Non Local Means Filter
- Finsler Backtracing (bundled in Finsler Tractography extension)
- Finsler Tractography (bundled in Finsler Tractography extension)
Arie Nakhmani
- Sobolev Segmenter (bundled in Sobolev Segmenter extension)
Atsushi Yamada
- Corner Annotation (bundled in Corner Annotation extension)
Benjamin Long
Bill Lorensen
- Add Scalar Volumes
- Checker Board Filter
- Create DICOMSeries
- Curvature Anisotropic Diffusion
- Diffusion Tensor Test
- Execution Model Tour
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Histogram Matching
- Median Image Filter
- Model Maker
- Multiply Scalar Volumes
- Orient Scalar Volume
- Otsu Threshold Image Filter
- Resample Scalar Volume
- Subtract Scalar Volumes
- Swiss Skull Stripper (bundled in Swiss Skull Stripper extension)
- Voting Binary Hole Filling Image Filter
Bradley Lowekamp
- Bin Shrink
- Double Threshold Effect
- IASEMImport
- IASEMImport Series
- Label Object Statistics
- Simple Filters
Bradley Lowekamp and Bill Lorensen
Casey B Goodlett
Charles Marion
Csaba Pinter
- Data
- Gel Dosimetry Analysis Algo (bundled in Gel Dosimetry Analysis extension)
- Subject Hierarchy
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
Dan Marcus
Daniel Blezek
Daniel Haehn
- Annotations
- EMSegment
- Merge Models
- Scene Views
Danny Perry
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Demian Wassermann
- DICOM2Full Brain Tractography
- Diffusion Weighted Volume Masking
- Fiber Bundle Label Select
- test tractography display
- Tractography Label Map Seeding
Dirk Padfield
Dominik Meier
Ethan Ulrich
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
Fotis Drakopoulos
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- PBNRR (bundled in PBNRR extension)
Francois Budin
Franklin King
- Scoliosis Monitoring
- Spinal Curvature Measurement (bundled in Scoliosis extension)
- Transforms
Greg Gardner
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Guido Gerig
Guillaume Pernelle
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Hans J. Johnson
- BRAINSFit
- BRAINSROIAuto
- BRAINSTransform Convert
Hans Johnson
- DWIConvert
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
Ivan Kolesov
- Carrera Slice (bundled in Carrera Slice extension)
- Carrera Slice Effect (bundled in Carrera Slice extension)
Jan Egger
Jayender Jagadeesan
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
Jean-Baptiste Berger
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store
- Fast Grow Cut (bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (bundled in Carrera Slice extension)
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Multi Volume Explorer
- Multi Volume Importer
- Sample Data
- Simple Filters
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
- Transforms
- View Controllers
- Welcome
Jim Miller
- Charting
- Pk Modeling (bundled in Pk Modeling extension)
- Simple Region Growing Segmentation
- Slice Link Logic
- Slicer4Minute
- View Controllers
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
John Evans
- Pk Modeling (bundled in Pk Modeling extension)
Jonathan Bronson
Josh Cates
- Label Map Smoothing
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Joy Matsui
- DWIConvert
Julien Finet
- Cameras
- Colors
- Data
- Double Arrays
- Event Broker
- Image Maker (bundled in Image Maker extension)
- Models
- Multi Volume Explorer
- Multi Volume Importer
- Scene Performance
- Threshold Scalar Volume
- Tractography Display
- Transforms
- Units
- Volume Rendering
- Volumes
Julien Jomier
Junichi Tokuda
- Corner Annotation (bundled in Corner Annotation extension)
- Curve Maker (bundled in Curve Maker extension)
- Dilate Label
- Erode Label
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
Kent Williams
- BRAINSTransform Convert
- DWIConvert
Kevin Wang
- Colors Scalar Bar Self Test
- Matlab Commander (bundled in Matlab Bridge extension)
- Matlab Module Generator (bundled in Matlab Bridge extension)
- Sequence Browser
- Sequences
Kilian Pohl
- Annotations
- Change Tracker (bundled in Change Tracker extension)
- Scene Views
Koichiro Murakami
- Corner Annotation (bundled in Corner Annotation extension)
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
Lauren Barber
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Lauren O'Donnell
Laurent Chauvin
- Curve Maker (bundled in Curve Maker extension)
- Dice Computation (bundled in Dice Computation extension)
- Percutaneous Approach Analysis (bundled in Percutaneous Approach Analysis extension)
- Tracker Stabilizer (bundled in Tracker Stabilizer extension)
Liang-Jia Zhu
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Liangjia Zhu
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
- LAScar Segmenter (bundled in LAScar Segmenter extension)
Luca Antiga
Luis G. Torres
- Port Placement (bundled in Port Placement extension)
Marc Niethammer
Marcel Prastawa prastawa@sci.utah.edu
Mark Scully
- DWIConvert
Markus Van Tol
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
Martin Styner
Matthew Holden
Matthew S. Holden
- Perk Evaluator (bundled in Perk Tutor extension)
- Transform Recorder (bundled in Perk Tutor extension)
- Workflow Segmentation (bundled in Perk Tutor extension)
Matthew Woehlke
Michael Jeulin-Lagarrigue
Minjeong Kim
Nabgha Fahrat
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Nicholas Herlambang
- JRC2013Vis
Nick Tustison
Nicole Aucoin
- ACPCTransform
- Add Many Markups Fiducial Test
- Annotations
- Cast Scalar Volume
- Colors
- Colors Scalar Bar Self Test
- Data
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker
- Markups
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume
- Merge Models
- Model Maker
- Models
- Model To Label Map
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Reporting (bundled in Reporting extension)
- Scene Views
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- Threshold Scalar Volume
- Volume Rendering Scene Close
- Volumes
Nigel Goh
- Thingiverse Browser (bundled in Thingiverse Browser extension)
Nikos Chrisochoides
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- PBNRR (bundled in PBNRR extension)
Olivier Clatz
Pat Marion
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
Paul Mercea
- Longitudinal PETCT (bundled in Longitudinal PETCT extension)
Pengdong Xiao
- Intensity Segmenter (bundled in Intensity Segmenter extension)
Peter Black
- Change Tracker (bundled in Change Tracker extension)
Peter Karasev
- Carrera Slice Effect (bundled in Carrera Slice extension)
Pierre Seroul
Pietro Nardelli
Raul San Jose
Rob MacLeod
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Ron Kikinis
- ACPCTransform
- Cast Scalar Volume
- Change Tracker (bundled in Change Tracker extension)
- Crop Volume
- Mask Scalar Volume
- Merge Models
- Model Maker
- Multi Volume Explorer
- Multi Volume Importer
- N4ITKBias Field Correction
- PETStandard Uptake Value Computation
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Robust Statistics Segmenter
- Surface Toolbox
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- Threshold Scalar Volume
- View Controllers
- Volume Rendering
Ross Whitaker
Ruifeng Chen
- Gyro Guide (bundled in Gyro Guide extension)
Sam Song
Sandy Wells
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Santiago Aja Fernandez
Sebastien Barré
Sebastien Barre
- EMSegment Command Line
Shigeyuki Naka
- Corner Annotation (bundled in Corner Annotation extension)
Soichiro Tani
- Corner Annotation (bundled in Corner Annotation extension)
Sonia Pujol
- Dice Computation (bundled in Dice Computation extension)
- DTIexport
- DTIimport
Stephen Aylward
Stephen R Aylward
Steve Pieper
- Atlas Tests
- Binary Watershed Effect
- Compare Volumes (bundled in CMFreg extension)
- Data Probe
- DICOM
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Editor
- Endoscopy
- fiber visibility crash2438
- Fiber Bundle To Label Map
- Label Statistics
- label Toggle Bug2049
- Landmark Registration (bundled in CMFreg extension)
- Multi Volume Explorer
- Multi Volume Importer
- Performance Tests
- Reporting (bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data
- scene Import2428
- Self Tests
- Simple Filters
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter (bundled in Slicer To Kiwi Exporter extension)
- Threshold Threading Test
- Vector To Scalar Volume
- View Controllers
- Volumes
- Xnat Slicer
Sunil Kumar
Sylvain Bouix
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Tamas Ungi
- Perk Evaluator (bundled in Perk Tutor extension)
- Python Metrics Calculator
- Scoliosis Monitoring
- Spinal Curvature Measurement (bundled in Scoliosis extension)
- Transform Recorder (bundled in Perk Tutor extension)
- Workflow Segmentation (bundled in Perk Tutor extension)
This tool was developed by Hans J. Johnson and Greg Harris.
- BRAINSDemon Warp
- VBRAINSDemon Warp
This tool was developed by Hans Johnson.
- BRAINSResize
This tool was developed by Kent Williams.
- BRAINSDWICleanup
This tool was developed by Vincent Magnotta
Tina Kapur
- i Gyne (bundled in i Gyne extension)
- Needle Finder (bundled in Needle Finder extension)
Tobias Penzkofer
Tohru Tani
- Corner Annotation (bundled in Corner Annotation extension)
Vince Magnotta
- DWIConvert
Vincent A. Magnotta
- BRAINSLabel Stats
Vinicius Boen
Vinicius Boen and Mason Winsauer
- Apply Matrix
- Downsize (bundled in CMFreg extension)
- Growing (bundled in CMFreg extension)
- Label Addition (bundled in CMFreg extension)
- Label Extraction (bundled in CMFreg extension)
- Mask Creation (bundled in CMFreg extension)
- Non Growing (bundled in CMFreg extension)
Wendy Plesniak
- Annotations
- PETStandard Uptake Value Computation
- PETSUVImage Maker (bundled in Longitudinal PETCT extension)
- Scene Views
- SUVFactor Calculator (bundled in PETDICOMExtension extension)
- View Controllers
- Welcome
Xiaodong Tao
- DWIConvert
- Model To Label Map
Xiaojun Chen
Yanling Liu
Yi Gao
- Carrera Slice Effect (bundled in Carrera Slice extension)
- Fast Grow Cut Effect (bundled in Fast Grow Cut Effect extension)
- i Gyne (bundled in i Gyne extension)
- LAScar Segmenter (bundled in LAScar Segmenter extension)
- Needle Finder (bundled in Needle Finder extension)
- Robust Statistics Segmenter
- Segmentation Aided Registration (bundled in Segmentation Aided Registration extension)
Yinglin Lee
- Test Grid Transform Registration
Yingxuan Zhu
- Pk Modeling (bundled in Pk Modeling extension)
Yixun Liu
- Body Centric Cubic Mesh (bundled in CBC 3D I2MConversion extension)
- Mesh Compression (bundled in CBC 3D I2MConversion extension)
- PBNRR (bundled in PBNRR extension)
Yong Zhang
Extensions by name
67 extensions:
- ABC
- Airway Segmentation
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Builder
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Erode Dilate Label
- Faceted Visualizer
- Fast Grow Cut Effect
- Fiber Viewer Light
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- hough Transform CLI
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- LASegmenter
- Light Weight Robot IGT
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Model Clip
- Model To Model Distance
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- RSSExtension
- Scoliosis
- Segmentation Aided Registration
- Shape Population Viewer
- Skull Stripper
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- SPHARM-PDM
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by category
26 categories:
- Cardiac
- Cardiac MRI toolkit
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Exporter
- Filtering
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Multidimensional data
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Shape Analysis
- Surface Models
- Tractography
- Training
- Utilities
- Vascular Modeling Toolkit
- Wizards
Cardiac
Cardiac MRI toolkit
Converters
Developer Tools
Diffusion
Editor Effects
Exporter
Filtering
Morphology
IGT
- Port Placement
- Light Weight Robot IGT
- Gyro Guide
- Corner Annotation
- i Gyne
- Slicer IGT
- Percutaneous Approach Analysis
- Needle Finder
- Tracker Stabilizer
- Resection Planner
Informatics
Mesh Generation
Microscopy
Multidimensional data
Quantification
Radiotherapy
Registration
Remote
Scoliosis
Segmentation
- Open CAD
- Swiss Skull Stripper
- Carrera Slice
- Skull Stripper
- Airway Segmentation
- hough Transform CLI
- LAScar Segmenter
- RSSExtension
- ABC
- MABMIS
- Sobolev Segmenter
- LASegmenter
- Fast Grow Cut Effect
- Intensity Segmenter
- Volume Clip
Shape Analysis
Surface Models
Tractography
Training
Utilities
Vascular Modeling Toolkit
Wizards
Extensions by contributing organization
54 contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Boston Childrens Hospital
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- GE
- GE GLobal Research
- GT
- Isomics
- Kitware
- LUH
- Massachusetts General Hospital
- Moka Creative LLC, Washington University in St. Louis
- NIRAL, UNC
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UIowa
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- University of Utah
- Utah
- UWA
- Washington University in St. Louis
- yogesh@bwh.harvard.edu
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Boston Childrens Hospital
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Light Weight Robot IGT
- Open CAD
- Pk Modeling
- RSSExtension
- Segmentation Aided Registration
- Tracker Stabilizer
BWH & MGH
BWH, SPL
BWH/UAB
CARMA
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
GE
GE GLobal Research
GT
Isomics
Kitware
LUH
Massachusetts General Hospital
Moka Creative LLC, Washington University in St. Louis
NIRAL, UNC
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SPL
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- LASegmenter
- RSSExtension
- Segmentation Aided Registration
- Sobolev Segmenter
UIowa
UNC
- CMFreg
- DTIAtlas Builder
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Fiber Viewer Light
- MABMIS
- Model To Model Distance
- Port Placement
- SPHARM-PDM
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
University of Utah
Utah
UWA
Washington University in St. Louis
yogesh@bwh.harvard.edu
Extensions by contributing individual
136 contributing individuals:
- Alireza Mehrtash
- Allen Tannenbaum
- Akila Viswanathan
- Alex Yarmarkovich
- Alireza Mehrtash
- Allen Tannenbaum
- Andre Mastmeyer
- Antonio Damato
- Carl-Fredrik Westin
- Carl-Fredrik Westin.
- Christian Baumgartner
- Hans Johnson
- Ipek Oguz
- Ivan Kolesov
- Jan Egger
- Jiashu Zhang
- Kent Williams
- Lauren Barber
- Liangjia Zhu
- Luping Fang
- Martin Styner
- Matt Lougheed
- Matthew S. Holden
- Nabgha Fahrat
- Patricio Vela
- Peter Savadjiev
- Qing Pan
- Ryan Eckbo
- Sam Song
- Sandy Wells
- Tina Kapur
- Tobias Penzkofer
- Xiaojun CHEN
- Xiaojun Chen
- Yi Gao
- Yinpeng Li
- Yundi Shi
- Adrien Kaiser
- Alan Morris
- Alexis Girault
- Alireza Mehrtash
- Allen Tannenbaum
- and Ron Kikinis
- Andinet Enquobahrie
- Andras Lasso
- Andrey Fedorov
- Andriy Fedorov
- Andriy Kot
- Antonio Tristan-Vega
- Arie Nakhmani
- Arnaud Gelas
- Atsushi Yamada
- Beatriz Paniagua
- Bill Lorensen
- Bradley Lowekamp
- Brig Bagley
- Csaba Pinter
- Dan Marcus
- Daniel Haehn
- Danny Perry
- Demian Wasssermann
- Dinggang Shen
- Ethan Ulrich
- Eugene Kholmovski
- Fotis Drakopoulos
- Francois Budin
- Franklin King
- Greg Gardner
- Greg Sharp
- Guillaume Pernelle
- Hans Johnson
- Harini Veeraraghavan
- Ivan Kolesov
- Jayender Jagadeesan
- Jean-Christophe Fillion-Robin
- Jennifer Andrea
- Jessica Forbes
- Jim Miller
- Jonathan Bronson
- Josh Cates
- Julien Finet
- Juliette Pera
- Jun LIN
- Junichi Tokuda
- Karl Fritscher
- Kevin Wang
- Kilian Pohl
- Koichiro Murakami
- Laurent Chauvin
- Liang-Jia Zhu
- Liangjia Zhu
- Luca Antiga
- Luis G. Torres
- Mahnaz Maddah
- Manson Winsauer
- Marcel Prastawa
- Martha Shenton
- Martin Styner
- Matt Lougheed
- Mattea Welch
- Matthew Holden
- Mauricio Reyes
- Ming-ching Chang
- Minjeong Kim
- Nicole Aucoin
- Nigel Goh
- Nikos Chrisochoides
- Olivier Clatz
- Pat Marion
- Paul Mercea
- Pengdong Xiao
- Peter Black
- Peter Karasev
- Pietro Nardelli
- Rick Herrick
- Rob Mac Leod
- Ron Kikinis
- Ruifeng Chen
- Salma Bengali
- Sebastian Tauscher
- Stefan Bauer
- Stefan Lienhard
- Steve Pieper
- Sunil Kumar
- Sylvain Bouix
- Tamas Ungi
- Thomas Fejes
- Vinicius Boen
- Vivek Narayan
- Xiaodong Tao
- Xiaofeng Liu
- Xiaolei Chen
- Yi Gao
- Yingxuan Zhu
- Yixun Liu
- Yogesh Rathi
Alireza Mehrtash
Allen Tannenbaum
Akila Viswanathan
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
Andre Mastmeyer
Antonio Damato
Carl-Fredrik Westin
Carl-Fredrik Westin.
Christian Baumgartner
Hans Johnson
Ipek Oguz
Ivan Kolesov
Jan Egger
Jiashu Zhang
Kent Williams
Lauren Barber
Liangjia Zhu
Luping Fang
Martin Styner
Matt Lougheed
Matthew S. Holden
Nabgha Fahrat
Patricio Vela
Peter Savadjiev
Qing Pan
Ryan Eckbo
Sam Song
Sandy Wells
Tina Kapur
Tobias Penzkofer
Xiaojun CHEN
Xiaojun Chen
Yi Gao
Yinpeng Li
Yundi Shi
Adrien Kaiser
Alan Morris
Alexis Girault
Alireza Mehrtash
Allen Tannenbaum
and Ron Kikinis
Andinet Enquobahrie
Andras Lasso
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PETDICOMExtension
- Reporting
- TCIABrowser
- Window Level Effect
Andriy Fedorov
Andriy Kot
Antonio Tristan-Vega
Arie Nakhmani
Arnaud Gelas
Atsushi Yamada
Beatriz Paniagua
Bill Lorensen
Bradley Lowekamp
Brig Bagley
Csaba Pinter
Dan Marcus
Daniel Haehn
Danny Perry
Demian Wasssermann
Dinggang Shen
Ethan Ulrich
Eugene Kholmovski
Fotis Drakopoulos
Francois Budin
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Fiber Viewer Light
- Intensity Segmenter
- Model To Model Distance
- SPHARM-PDM
Franklin King
Greg Gardner
Greg Sharp
Guillaume Pernelle
Hans Johnson
Harini Veeraraghavan
Ivan Kolesov
Jayender Jagadeesan
Jean-Christophe Fillion-Robin
Jennifer Andrea
Jessica Forbes
Jim Miller
Jonathan Bronson
Josh Cates
Julien Finet
Juliette Pera
Jun LIN
Junichi Tokuda
Karl Fritscher
Kevin Wang
Kilian Pohl
Koichiro Murakami
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luca Antiga
Luis G. Torres
Mahnaz Maddah
Manson Winsauer
Marcel Prastawa
Martha Shenton
Martin Styner
Matt Lougheed
Mattea Welch
Matthew Holden
Mauricio Reyes
Ming-ching Chang
Minjeong Kim
Nicole Aucoin
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Pietro Nardelli
Rick Herrick
Rob MacLeod
Ron Kikinis
Ruifeng Chen
Salma Bengali
Sebastian Tauscher
Stefan Bauer
Stefan Lienhard
Steve Pieper
Sunil Kumar
Sylvain Bouix
Tamas Ungi
Thomas Fejes
Vinicius Boen
Vivek Narayan
Xiaodong Tao
Xiaofeng Liu
Xiaolei Chen
Yi Gao
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- LASegmenter
- RSSExtension
- Segmentation Aided Registration
