Difference between revisions of "User:UpdateBot/Issue-2843-Consolidated-Extension-List"
From Slicer Wiki
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
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* [[#Work_in_Progress|Work in Progress]] | * [[#Work_in_Progress|Work in Progress]] | ||
* [[#XNATSlicer|XNATSlicer]] | * [[#XNATSlicer|XNATSlicer]] | ||
| − | == BRAINS == | + | BRAINS === BRAINS |
| − | == LabelStatistics | + | LabelStatistics ==== LabelStatistics |
* [[Documentation/Nightly/Modules/BRAINSLabelStats|BRAINSLabel Stats]] | * [[Documentation/Nightly/Modules/BRAINSLabelStats|BRAINSLabel Stats]] | ||
| − | == CMF Registration | + | CMF Registration === CMF Registration |
* [[Documentation/Nightly/Modules/ApplyMatrix|Apply Matrix]] | * [[Documentation/Nightly/Modules/ApplyMatrix|Apply Matrix]] | ||
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] | ||
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* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] | * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] | ||
* [[Documentation/Nightly/Modules/Downsize|Downsize]] | * [[Documentation/Nightly/Modules/Downsize|Downsize]] | ||
| − | == Voxelbase Registration | + | Voxelbase Registration ==== Voxelbase Registration |
* [[Documentation/Nightly/Modules/Growing|Growing]] | * [[Documentation/Nightly/Modules/Growing|Growing]] | ||
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] | * [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] | ||
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] | * [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] | ||
| − | == Converters | + | Converters === Converters |
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]] | * [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]] | ||
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] | * [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] | ||
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] | * [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] | ||
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] | * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] | ||
| − | == Developer Tools | + | Developer Tools === Developer Tools |
* [[Documentation/Nightly/Modules/EventBroker|Event Broker]] | * [[Documentation/Nightly/Modules/EventBroker|Event Broker]] | ||
* [[Documentation/Nightly/Modules/DoubleArrays|Double Arrays]] | * [[Documentation/Nightly/Modules/DoubleArrays|Double Arrays]] | ||
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* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]] | * [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]] | ||
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]] | * [[Documentation/Nightly/Modules/ImageMaker|Image Maker]] | ||
| − | == DICOM Plugins | + | DICOM Plugins ==== DICOM Plugins |
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] | * [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] | ||
* [[Documentation/Nightly/Modules/DICOMLongitudinalPETCTPlugin|DICOMLongitudinal PETCTPlugin]] | * [[Documentation/Nightly/Modules/DICOMLongitudinalPETCTPlugin|DICOMLongitudinal PETCTPlugin]] | ||
| Line 297: | Line 297: | ||
* [[Documentation/Nightly/Modules/DICOMScalarVolumePlugin|DICOMScalar Volume Plugin]] | * [[Documentation/Nightly/Modules/DICOMScalarVolumePlugin|DICOMScalar Volume Plugin]] | ||
* [[Documentation/Nightly/Modules/DICOMSlicerDataBundlePlugin|DICOMSlicer Data Bundle Plugin]] | * [[Documentation/Nightly/Modules/DICOMSlicerDataBundlePlugin|DICOMSlicer Data Bundle Plugin]] | ||
| − | == Editor Extensions | + | Editor Extensions ==== Editor Extensions |
* [[Documentation/Nightly/Modules/BinaryWatershedEffect|Binary Watershed Effect]] | * [[Documentation/Nightly/Modules/BinaryWatershedEffect|Binary Watershed Effect]] | ||
* [[Documentation/Nightly/Modules/FastGrowCutEffect|Fast Grow Cut Effect]] | * [[Documentation/Nightly/Modules/FastGrowCutEffect|Fast Grow Cut Effect]] | ||
* [[Documentation/Nightly/Modules/CarreraSliceEffect|Carrera Slice Effect]] | * [[Documentation/Nightly/Modules/CarreraSliceEffect|Carrera Slice Effect]] | ||
* [[Documentation/Nightly/Modules/DoubleThresholdEffect|Double Threshold Effect]] | * [[Documentation/Nightly/Modules/DoubleThresholdEffect|Double Threshold Effect]] | ||
| − | == | + | Matlab ==== Matlab |
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] | * [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] | ||
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] | * [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] | ||
| − | == Diffusion | + | Diffusion === Diffusion |
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] | * [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] | ||
* [[Documentation/Nightly/Modules/DICOM2FullBrainTractography|DICOM2Full Brain Tractography]] | * [[Documentation/Nightly/Modules/DICOM2FullBrainTractography|DICOM2Full Brain Tractography]] | ||
| − | == Diffusion Data Conversion | + | Diffusion Data Conversion ==== Diffusion Data Conversion |
* [[Documentation/Nightly/Modules/DWIConvert|DWIConvert]] | * [[Documentation/Nightly/Modules/DWIConvert|DWIConvert]] | ||
| − | == Diffusion Tensor Images | + | Diffusion Tensor Images ==== Diffusion Tensor Images |
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] | * [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] | ||
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] | * [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] | ||
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] | * [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] | ||
* [[Documentation/Nightly/Modules/TractographyInteractiveSeeding|Tractography Interactive Seeding]] | * [[Documentation/Nightly/Modules/TractographyInteractiveSeeding|Tractography Interactive Seeding]] | ||
| − | == Diffusion Weighted Images | + | Diffusion Weighted Images ==== Diffusion Weighted Images |
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] | * [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] | ||
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] | * [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] | ||
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* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] | ||
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] | * [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] | ||
| − | == | + | Tractography ==== Tractography |
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] | * [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] | ||
* [[Documentation/Nightly/Modules/FiberBundleLabelSelect|Fiber Bundle Label Select]] | * [[Documentation/Nightly/Modules/FiberBundleLabelSelect|Fiber Bundle Label Select]] | ||
| − | == Editor Effects | + | Editor Effects === Editor Effects |
* [[Documentation/Nightly/Modules/WindowLevelEffect|Window Level Effect]] | * [[Documentation/Nightly/Modules/WindowLevelEffect|Window Level Effect]] | ||
| − | == Endoscopy | + | Endoscopy === Endoscopy |
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]] | * [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]] | ||
| − | == Examples | + | Examples === Examples |
* [[Documentation/Nightly/Modules/CarreraSlice|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSlice|Carrera Slice]] | ||
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] | ||
* [[Documentation/Nightly/Modules/FastGrowCutSegmenter|Fast Grow Cut Segmenter]] | * [[Documentation/Nightly/Modules/FastGrowCutSegmenter|Fast Grow Cut Segmenter]] | ||
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] | ||
| − | == Exporter | + | Exporter === Exporter |
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | ||
| − | == Filtering | + | Filtering === Filtering |
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] | * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] | ||
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] | * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] | ||
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* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] | * [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] | ||
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] | * [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] | ||
| − | == | + | Arithmetic ==== Arithmetic |
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] | * [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] | ||
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]] | * [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]] | ||
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* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] | * [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] | ||
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] | * [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] | ||
| − | == | + | Denoising ==== Denoising |
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] | * [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] | ||
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] | * [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] | ||
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] | * [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] | ||
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] | * [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] | ||
| − | == | + | Morphology ==== Morphology |
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] | * [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] | ||
* [[Documentation/Nightly/Modules/ErodeLabel|Erode Label]] | * [[Documentation/Nightly/Modules/ErodeLabel|Erode Label]] | ||
* [[Documentation/Nightly/Modules/DilateLabel|Dilate Label]] | * [[Documentation/Nightly/Modules/DilateLabel|Dilate Label]] | ||
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] | * [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] | ||
| − | == IGT | + | IGT === IGT |
* [[Documentation/Nightly/Modules/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] | * [[Documentation/Nightly/Modules/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] | ||
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]] | * [[Documentation/Nightly/Modules/PortPlacement|Port Placement]] | ||
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* [[Documentation/Nightly/Modules/iGyne|i Gyne]] | * [[Documentation/Nightly/Modules/iGyne|i Gyne]] | ||
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] | ||
| − | == Informatics | + | Informatics === Informatics |
* [[Documentation/Nightly/Modules/Annotations|Annotations]] | * [[Documentation/Nightly/Modules/Annotations|Annotations]] | ||
* [[Documentation/Nightly/Modules/Markups|Markups]] | * [[Documentation/Nightly/Modules/Markups|Markups]] | ||
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* [[Documentation/Nightly/Modules/CurveMaker|Curve Maker]] | * [[Documentation/Nightly/Modules/CurveMaker|Curve Maker]] | ||
* [[Documentation/Nightly/Modules/TCIABrowser|TCIABrowser]] | * [[Documentation/Nightly/Modules/TCIABrowser|TCIABrowser]] | ||
| − | == Legacy == | + | Legacy === Legacy |
| − | == Converters | + | Converters ==== Converters |
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]] | * [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]] | ||
| − | == | + | Diffusion ==== Diffusion |
| − | == | + | Denoising ===== Denoising |
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] | * [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] | ||
| − | == Diffusion Data Conversion | + | Diffusion Data Conversion ===== Diffusion Data Conversion |
* [[Documentation/Nightly/Modules/DTIimport|DTIimport]] | * [[Documentation/Nightly/Modules/DTIimport|DTIimport]] | ||
* [[Documentation/Nightly/Modules/DTIexport|DTIexport]] | * [[Documentation/Nightly/Modules/DTIexport|DTIexport]] | ||
| − | == | + | Filtering ==== Filtering |
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] | * [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] | ||
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]] | * [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]] | ||
| − | == | + | Registration ==== Registration |
* [[Documentation/Nightly/Modules/TestGridTransformRegistration|Test Grid Transform Registration]] | * [[Documentation/Nightly/Modules/TestGridTransformRegistration|Test Grid Transform Registration]] | ||
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] | * [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] | ||
| − | == Work in Progress == | + | Work in Progress ==== Work in Progress |
| − | == Diffusion Tensor == | + | Diffusion Tensor ===== Diffusion Tensor |
| − | == | + | Test ====== Test |
* [[Documentation/Nightly/Modules/DiffusionTensorTest|Diffusion Tensor Test]] | * [[Documentation/Nightly/Modules/DiffusionTensorTest|Diffusion Tensor Test]] | ||
| − | == Mesh Generation | + | Mesh Generation === Mesh Generation |
* [[Documentation/Nightly/Modules/CleaverCLI|Cleaver CLI]] | * [[Documentation/Nightly/Modules/CleaverCLI|Cleaver CLI]] | ||
| − | == MeshGeneration | + | MeshGeneration === MeshGeneration |
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] | * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] | ||
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] | * [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] | ||
| − | == Microscopy | + | Microscopy === Microscopy |
* [[Documentation/Nightly/Modules/BinShrink|Bin Shrink]] | * [[Documentation/Nightly/Modules/BinShrink|Bin Shrink]] | ||
* [[Documentation/Nightly/Modules/LabelObjectStatistics|Label Object Statistics]] | * [[Documentation/Nightly/Modules/LabelObjectStatistics|Label Object Statistics]] | ||
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* [[Documentation/Nightly/Modules/IASEMImportSeries|IASEMImport Series]] | * [[Documentation/Nightly/Modules/IASEMImportSeries|IASEMImport Series]] | ||
* [[Documentation/Nightly/Modules/IASEMImport|IASEMImport]] | * [[Documentation/Nightly/Modules/IASEMImport|IASEMImport]] | ||
| − | == Multidimensional data | + | Multidimensional data === Multidimensional data |
* [[Documentation/Nightly/Modules/MetafileImporter|Metafile Importer]] | * [[Documentation/Nightly/Modules/MetafileImporter|Metafile Importer]] | ||
* [[Documentation/Nightly/Modules/SequenceBrowser|Sequence Browser]] | * [[Documentation/Nightly/Modules/SequenceBrowser|Sequence Browser]] | ||
* [[Documentation/Nightly/Modules/Sequences|Sequences]] | * [[Documentation/Nightly/Modules/Sequences|Sequences]] | ||
| − | == MultiVolume Support | + | MultiVolume Support === MultiVolume Support |
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]] | * [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]] | ||
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] | * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] | ||
| − | == Perk Tutor | + | Perk Tutor === Perk Tutor |
* [[Documentation/Nightly/Modules/PythonMetricsCalculator|Python Metrics Calculator]] | * [[Documentation/Nightly/Modules/PythonMetricsCalculator|Python Metrics Calculator]] | ||
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] | * [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] | ||
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] | * [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] | ||
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] | * [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] | ||
| − | == Quantification | + | Quantification === Quantification |
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] | * [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] | ||
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] | ||
| Line 433: | Line 433: | ||
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] | * [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] | ||
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]] | * [[Documentation/Nightly/Modules/DataProbe|Data Probe]] | ||
| − | == | + | ChangeQuantification ==== ChangeQuantification |
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] | * [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] | ||
| − | == Registration | + | Registration === Registration |
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]] | * [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]] | ||
* [[Documentation/Nightly/Modules/Transforms|Transforms]] | * [[Documentation/Nightly/Modules/Transforms|Transforms]] | ||
| Line 442: | Line 442: | ||
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]] | * [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]] | ||
* [[Documentation/Nightly/Modules/PBNRR|PBNRR]] | * [[Documentation/Nightly/Modules/PBNRR|PBNRR]] | ||
| − | == | + | Specialized ==== Specialized |
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]] | * [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]] | ||
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] | * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] | ||
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* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] | * [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] | ||
* [[Documentation/Nightly/Modules/Reformat|Reformat]] | * [[Documentation/Nightly/Modules/Reformat|Reformat]] | ||
| − | == Segmentation | + | Segmentation === Segmentation |
* [[Documentation/Nightly/Modules/Editor|Editor]] | * [[Documentation/Nightly/Modules/Editor|Editor]] | ||
* [[Documentation/Nightly/Modules/EMSegmentQuick|EMSegment Quick]] | * [[Documentation/Nightly/Modules/EMSegmentQuick|EMSegment Quick]] | ||
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* [[Documentation/Nightly/Modules/IGR3D_MABMIS_Training|IGR3D MABMIS Training]] | * [[Documentation/Nightly/Modules/IGR3D_MABMIS_Training|IGR3D MABMIS Training]] | ||
* [[Documentation/Nightly/Modules/IntensitySegmenter|Intensity Segmenter]] | * [[Documentation/Nightly/Modules/IntensitySegmenter|Intensity Segmenter]] | ||
| − | == | + | Specialized ==== Specialized |
* [[Documentation/Nightly/Modules/EMSegmentCommandLine|EMSegment Command Line]] | * [[Documentation/Nightly/Modules/EMSegmentCommandLine|EMSegment Command Line]] | ||
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] | * [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] | ||
* [[Documentation/Nightly/Modules/BRAINSROIAuto|BRAINSROIAuto]] | * [[Documentation/Nightly/Modules/BRAINSROIAuto|BRAINSROIAuto]] | ||
| − | == Slicelets | + | Slicelets === Slicelets |
* [[Documentation/Nightly/Modules/GelDosimetryAnalysisAlgo|Gel Dosimetry Analysis Algo]] | * [[Documentation/Nightly/Modules/GelDosimetryAnalysisAlgo|Gel Dosimetry Analysis Algo]] | ||
| − | == Surface Models | + | Surface Models === Surface Models |
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]] | * [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]] | ||
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]] | * [[Documentation/Nightly/Modules/MergeModels|Merge Models]] | ||
| Line 477: | Line 477: | ||
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] | * [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] | ||
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] | * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] | ||
| − | == Testing | + | Testing === Testing |
* [[Documentation/Nightly/Modules/SelfTests|Self Tests]] | * [[Documentation/Nightly/Modules/SelfTests|Self Tests]] | ||
* [[Documentation/Nightly/Modules/CLIROITest|CLIROITest]] | * [[Documentation/Nightly/Modules/CLIROITest|CLIROITest]] | ||
| Line 485: | Line 485: | ||
* [[Documentation/Nightly/Modules/PerformanceTests|Performance Tests]] | * [[Documentation/Nightly/Modules/PerformanceTests|Performance Tests]] | ||
* [[Documentation/Nightly/Modules/SlicerMRBTest|Slicer MRBTest]] | * [[Documentation/Nightly/Modules/SlicerMRBTest|Slicer MRBTest]] | ||
| − | == | + | TestCases ==== TestCases |
* [[Documentation/Nightly/Modules/SliceLinkLogic|Slice Link Logic]] | * [[Documentation/Nightly/Modules/SliceLinkLogic|Slice Link Logic]] | ||
* [[Documentation/Nightly/Modules/AtlasTests|Atlas Tests]] | * [[Documentation/Nightly/Modules/AtlasTests|Atlas Tests]] | ||
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* [[Documentation/Nightly/Modules/Slicer4Minute|Slicer4Minute]] | * [[Documentation/Nightly/Modules/Slicer4Minute|Slicer4Minute]] | ||
* [[Documentation/Nightly/Modules/labelToggleBug2049|label Toggle Bug2049]] | * [[Documentation/Nightly/Modules/labelToggleBug2049|label Toggle Bug2049]] | ||
| − | == Unspecified | + | Unspecified === Unspecified |
* [[Documentation/Nightly/Modules/BRAINSDWICleanup|BRAINSDWICleanup]] | * [[Documentation/Nightly/Modules/BRAINSDWICleanup|BRAINSDWICleanup]] | ||
| − | == Utilities | + | Utilities === Utilities |
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] | * [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] | ||
* [[Documentation/Nightly/Modules/EMSegmentTransformToNewFormat|EMSegment Transform To New Format]] | * [[Documentation/Nightly/Modules/EMSegmentTransformToNewFormat|EMSegment Transform To New Format]] | ||
* [[Documentation/Nightly/Modules/DataStore|Data Store]] | * [[Documentation/Nightly/Modules/DataStore|Data Store]] | ||
| − | == | + | BRAINS ==== BRAINS |
* [[Documentation/Nightly/Modules/BRAINSTransformConvert|BRAINSTransform Convert]] | * [[Documentation/Nightly/Modules/BRAINSTransformConvert|BRAINSTransform Convert]] | ||
| − | == Wizards | + | Wizards === Wizards |
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] | * [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] | ||
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]] | ||
| − | == Work in Progress | + | Work in Progress === Work in Progress |
* [[Documentation/Nightly/Modules/LongitudinalPETCT|Longitudinal PETCT]] | * [[Documentation/Nightly/Modules/LongitudinalPETCT|Longitudinal PETCT]] | ||
| − | == | + | Converters ==== Converters |
* [[Documentation/Nightly/Modules/LabelToDICOMSEGConverter|Label To DICOMSEGConverter]] | * [[Documentation/Nightly/Modules/LabelToDICOMSEGConverter|Label To DICOMSEGConverter]] | ||
| − | == | + | Informatics ==== Informatics |
* [[Documentation/Nightly/Modules/Reporting|Reporting]] | * [[Documentation/Nightly/Modules/Reporting|Reporting]] | ||
| − | == | + | TestCases ===== TestCases |
* [[Documentation/Nightly/Modules/ReportingSelfTest|Reporting Self Test]] | * [[Documentation/Nightly/Modules/ReportingSelfTest|Reporting Self Test]] | ||
* [[Documentation/Nightly/Modules/LabelToDICOMSEGConverterSelfTest|Label To DICOMSEGConverter Self Test]] | * [[Documentation/Nightly/Modules/LabelToDICOMSEGConverterSelfTest|Label To DICOMSEGConverter Self Test]] | ||
| − | == XNATSlicer | + | XNATSlicer === XNATSlicer |
* [[Documentation/Nightly/Modules/XnatSlicer|Xnat Slicer]] | * [[Documentation/Nightly/Modules/XnatSlicer|Xnat Slicer]] | ||
= Modules by contributing organization = | = Modules by contributing organization = | ||
| Line 1,805: | Line 1,805: | ||
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]] | * [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]] | ||
* [[#Wizards|Wizards]] | * [[#Wizards|Wizards]] | ||
| − | == Cardiac | + | Cardiac === Cardiac |
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
| − | == Cardiac MRI toolkit | + | Cardiac MRI toolkit === Cardiac MRI toolkit |
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | == Converters | + | Converters === Converters |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| − | == Developer Tools | + | Developer Tools === Developer Tools |
* [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] | ||
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] | ||
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] | ||
| − | == Diffusion | + | Diffusion === Diffusion |
* [[Documentation/Nightly/Extensions/DTIAtlasBuilder|DTIAtlas Builder]] | * [[Documentation/Nightly/Extensions/DTIAtlasBuilder|DTIAtlas Builder]] | ||
* [[Documentation/Nightly/Extensions/DTIProcess|DTIProcess]] | * [[Documentation/Nightly/Extensions/DTIProcess|DTIProcess]] | ||
| Line 1,821: | Line 1,821: | ||
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] | ||
* [[Documentation/Nightly/Extensions/DTIPrep|DTIPrep]] | * [[Documentation/Nightly/Extensions/DTIPrep|DTIPrep]] | ||
| − | == Editor Effects | + | Editor Effects === Editor Effects |
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | ||
| − | == Exporter | + | Exporter === Exporter |
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | ||
| − | == Filtering == | + | Filtering === Filtering |
| − | == Morphology | + | Morphology ==== Morphology |
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] | ||
| − | == IGT | + | IGT === IGT |
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] | ||
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] | * [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] | ||
| Line 1,839: | Line 1,839: | ||
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] | ||
* [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] | * [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] | ||
| − | == Informatics | + | Informatics === Informatics |
* [[Documentation/Nightly/Extensions/Reporting|Reporting]] | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] | ||
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] | ||
| Line 1,845: | Line 1,845: | ||
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] | ||
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] | ||
| − | == Mesh Generation | + | Mesh Generation === Mesh Generation |
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] | ||
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] | * [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] | ||
| − | == Microscopy | + | Microscopy === Microscopy |
* [[Documentation/Nightly/Extensions/IASEM|IASEM]] | * [[Documentation/Nightly/Extensions/IASEM|IASEM]] | ||
| − | == Multidimensional data | + | Multidimensional data === Multidimensional data |
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] | ||
| − | == Quantification | + | Quantification === Quantification |
* [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] | ||
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] | * [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] | ||
| − | == Radiotherapy | + | Radiotherapy === Radiotherapy |
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] | * [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | == Registration | + | Registration === Registration |
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] | * [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] | ||
| − | == Remote | + | Remote === Remote |
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] | ||
| − | == Scoliosis | + | Scoliosis === Scoliosis |
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] | * [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] | ||
| − | == Segmentation | + | Segmentation === Segmentation |
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] | ||
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] | ||
| Line 1,882: | Line 1,882: | ||
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] | ||
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] | * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] | ||
| − | == Shape Analysis | + | Shape Analysis === Shape Analysis |
* [[Documentation/Nightly/Extensions/ModelToModelDistance|Model To Model Distance]] | * [[Documentation/Nightly/Extensions/ModelToModelDistance|Model To Model Distance]] | ||
* [[Documentation/Nightly/Extensions/ShapePopulationViewer|Shape Population Viewer]] | * [[Documentation/Nightly/Extensions/ShapePopulationViewer|Shape Population Viewer]] | ||
* [http://www.nitrc.org/projects/spharm-pdm SPHARM-PDM] | * [http://www.nitrc.org/projects/spharm-pdm SPHARM-PDM] | ||
| − | == Surface Models | + | Surface Models === Surface Models |
* [[Documentation/Nightly/Extensions/ModelClip|Model Clip]] | * [[Documentation/Nightly/Extensions/ModelClip|Model Clip]] | ||
| − | == Tractography | + | Tractography === Tractography |
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] | * [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] | ||
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] | * [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] | ||
| − | == Training | + | Training === Training |
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] | * [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] | ||
| − | == Utilities | + | Utilities === Utilities |
* [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] | ||
| − | == Vascular Modeling Toolkit | + | Vascular Modeling Toolkit === Vascular Modeling Toolkit |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | == Wizards | + | Wizards === Wizards |
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
= Extensions by contributing organization = | = Extensions by contributing organization = | ||
Revision as of 07:35, 4 December 2014
- Modules by name
- Modules by category
- Modules by contributing organization
- Modules by contributing individual
- Extensions by name
- Extensions by category
- Extensions by contributing organization
- Extensions by contributing individual
Modules by name
- ABC
- ACPCTransform
- Add Many Markups Fiducial Test
- Add Scalar Volumes
- Airway Segmentation CLI
- Annotations
- Apply Matrix
- Atlas Tests
- Binary Watershed Effect
- Bin Shrink
- Body Centric Cubic Mesh
- BRAINSDemon Warp
- BRAINSDWICleanup
- BRAINSFit
- BRAINSLabel Stats
- BRAINSResample
- BRAINSResize
- BRAINSROIAuto
- BRAINSTransform Convert
- BSpline To Deformation Field
- Cameras
- Carrera Slice
- Carrera Slice Effect
- Cast Scalar Volume
- Change Tracker
- Change Tracker Self Test
- Charting
- Checker Board Filter
- Cleaver CLI
- CLI4Test
- CLIROITest
- Colors
- Colors Scalar Bar Self Test
- Compare Volumes
- Corner Annotation
- Create DICOMSeries
- Crop Volume
- Curvature Anisotropic Diffusion
- Curve Maker
- Data
- Data Probe
- Data Store
- Dice Computation
- DICOM
- DICOM2Full Brain Tractography
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- DICOMScalar Volume Plugin
- DICOMSegmentation Plugin
- DICOMSlicer Data Bundle Plugin
- Diffusion Tensor Scalar Measurements
- Diffusion Tensor Test
- Diffusion Weighted Volume Masking
- Dilate Label
- Double Arrays
- Double Threshold Effect
- Downsize
- DTIexport
- DTIimport
- DWIConvert
- DWIJoint Rician LMMSEFilter
- DWIRician LMMSEFilter
- DWITo DTIEstimation
- DWIUnbiased Non Local Means Filter
- Editor
- EMSegment
- EMSegment Command Line
- EMSegment Quick
- EMSegment Transform To New Format
- Endoscopy
- Erode Label
- Event Broker
- Execution Model Tour
- Expert Automated Registration
- Extension Wizard
- Extract Skeleton
- Fast Grow Cut
- Fast Grow Cut Effect
- Fast Grow Cut Segmenter
- fiber visibility crash2438
- Fiber Bundle Label Select
- Fiber Bundle To Label Map
- Fiducial Layout Switch Bug1914
- Fiducial Registration
- Finsler Backtracing
- Finsler Tractography
- Gaussian Blur Image Filter
- Gel Dosimetry Analysis Algo
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Growing
- Gyro Guide
- Histogram Matching
- IASEMImport
- IASEMImport Series
- IGR3D MABMIS Testing
- IGR3D MABMIS Training
- i Gyne
- Image Label Combine
- Image Maker
- Intensity Difference Metric
- Intensity Segmenter
- JRC2013Vis
- KUtil
- Label Addition
- Label Extraction
- Label Map Smoothing
- Label Object Statistics
- Label Statistics
- Label To DICOMSEGConverter
- Label To DICOMSEGConverter Self Test
- label Toggle Bug2049
- Landmark Registration
- LAScar Segmenter
- Longitudinal PETCT
- Markups
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Creation
- Mask Scalar Volume
- Matlab Commander
- Matlab Module Generator
- Median Image Filter
- Merge Models
- Mesh Compression
- Metafile Importer
- Model Maker
- Models
- Model To Label Map
- Multiply Scalar Volumes
- Multi Volume Explorer
- Multi Volume Importer
- Multi Volume Importer Plugin
- N4ITKBias Field Correction
- Needle Finder
- Neurosurgical Planning Tutorial Markups Self Test
- Non Growing
- Open IGTLink IF
- Orient Scalar Volume
- Otsu Threshold Image Filter
- PBNRR
- Percutaneous Approach Analysis
- Performance Tests
- Perform Metric Test
- Perk Evaluator
- PETStandard Uptake Value Computation
- PETSUVImage Maker
- Pk Modeling
- Port Placement
- Probe Volume With Model
- Py Dev Remote Debug
- Python Metrics Calculator
- Reformat
- Reporting
- Reporting Self Test
- Resample DTIVolume
- Resample Scalar Vector DWIVolume
- Resample Scalar Volume
- Robust Statistics Segmenter
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data
- scene Import2428
- Scene Performance
- Scene Views
- Scoliosis Monitoring
- Segmentation Aided Registration
- Self Tests
- Sequence Browser
- Sequences
- Simple Filters
- Simple Region Growing Segmentation
- Slice Link Logic
- Slicer4Minute
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Spacing Aware Curvature Diffusion
- Spinal Curvature Measurement
- Subject Hierarchy
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Subtract Scalar Volumes
- Surface Registration
- Surface Toolbox
- SUVFactor Calculator
- Swiss Skull Stripper
- TCIABrowser
- test tractography display
- Test Grid Transform Registration
- Thingiverse Browser
- Threshold Scalar Volume
- Threshold Threading Test
- Tracker Stabilizer
- Tractography Display
- Tractography Interactive Seeding
- Tractography Label Map Seeding
- Transform Recorder
- Transforms
- Units
- VBRAINSDemon Warp
- Vector To Scalar Volume
- View Controllers
- View Controllers Slice Interpolation Bug1926
- Volume Clip With Model
- Volume Clip With Roi
- Volume Rendering
- Volume Rendering Scene Close
- Volumes
- Voting Binary Hole Filling Image Filter
- Welcome
- Window Level Effect
- Workflow Segmentation
- Xnat Slicer
Modules by category
Categories:
- BRAINS
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Endoscopy
- Examples
- Exporter
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multidimensional data
- Multi Volume Support
- Perk Tutor
- Quantification
- Registration
- Segmentation
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Wizards
- Work in Progress
- XNATSlicer
BRAINS === BRAINS LabelStatistics ==== LabelStatistics
CMF Registration === CMF Registration
Voxelbase Registration ==== Voxelbase Registration
Converters === Converters
Developer Tools === Developer Tools
- Event Broker
- Double Arrays
- Py Dev Remote Debug
- Cameras
- Extension Wizard
- Execution Model Tour
- Image Maker
DICOM Plugins ==== DICOM Plugins
- DICOMRWVMPlugin
- DICOMLongitudinal PETCTPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- DICOMDiffusion Volume Plugin
- DICOMSegmentation Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions ==== Editor Extensions
Matlab ==== Matlab
Diffusion === Diffusion
Diffusion Data Conversion ==== Diffusion Data Conversion
Diffusion Tensor Images ==== Diffusion Tensor Images
- Resample DTIVolume
- Diffusion Tensor Scalar Measurements
- Tractography Label Map Seeding
- Tractography Interactive Seeding
Diffusion Weighted Images ==== Diffusion Weighted Images
- DWIRician LMMSEFilter
- DWIJoint Rician LMMSEFilter
- DWITo DTIEstimation
- Finsler Backtracing
- Resample Scalar Vector DWIVolume
- Finsler Tractography
- Diffusion Weighted Volume Masking
Tractography ==== Tractography
Editor Effects === Editor Effects
Endoscopy === Endoscopy
Examples === Examples
Exporter === Exporter
Filtering === Filtering
- Extract Skeleton
- Threshold Scalar Volume
- N4ITKBias Field Correction
- Simple Filters
- Image Label Combine
- Voting Binary Hole Filling Image Filter
- Histogram Matching
- Checker Board Filter
Arithmetic ==== Arithmetic
- Multiply Scalar Volumes
- Add Scalar Volumes
- Cast Scalar Volume
- Subtract Scalar Volumes
- Mask Scalar Volume
Denoising ==== Denoising
- Gradient Anisotropic Diffusion
- Median Image Filter
- Gaussian Blur Image Filter
- Curvature Anisotropic Diffusion
Morphology ==== Morphology
IGT === IGT
- Percutaneous Approach Analysis
- Port Placement
- Open IGTLink IF
- Needle Finder
- Tracker Stabilizer
- Gyro Guide
- i Gyne
- Corner Annotation
Informatics === Informatics
Legacy === Legacy Converters ==== Converters
Diffusion ==== Diffusion Denoising ===== Denoising
Diffusion Data Conversion ===== Diffusion Data Conversion
Filtering ==== Filtering
Registration ==== Registration
Work in Progress ==== Work in Progress Diffusion Tensor ===== Diffusion Tensor Test ====== Test
Mesh Generation === Mesh Generation
MeshGeneration === MeshGeneration
Microscopy === Microscopy
Multidimensional data === Multidimensional data
MultiVolume Support === MultiVolume Support
Perk Tutor === Perk Tutor
Quantification === Quantification
- PETStandard Uptake Value Computation
- SUVFactor Calculator
- Spinal Curvature Measurement
- Pk Modeling
- Label Statistics
- PETSUVImage Maker
- Dice Computation
- Data Probe
ChangeQuantification ==== ChangeQuantification
Registration === Registration
Specialized ==== Specialized
Segmentation === Segmentation
- Editor
- EMSegment Quick
- Simple Region Growing Segmentation
- EMSegment
- Volume Clip With Roi
- Swiss Skull Stripper
- Airway Segmentation CLI
- LAScar Segmenter
- Sobolev Segmenter
- Volume Clip With Model
- IGR3D MABMIS Testing
- ABC
- IGR3D MABMIS Training
- Intensity Segmenter
Specialized ==== Specialized
Slicelets === Slicelets
Surface Models === Surface Models
- Model To Label Map
- Merge Models
- Surface Toolbox
- Probe Volume With Model
- Grayscale Model Maker
- Label Map Smoothing
- Model Maker
Testing === Testing
- Self Tests
- CLIROITest
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring
- Performance Tests
- Slicer MRBTest
TestCases ==== TestCases
- Slice Link Logic
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close
- test tractography display
- Subject Hierarchy Core Plugins Self Test
- slicer Close Crash Bug2590
- Subject Hierarchy Generic Self Test
- Charting
- Scene Performance
- Markups In Compare Viewers Self Test
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Neurosurgical Planning Tutorial Markups Self Test
- Colors Scalar Bar Self Test
- Markups In Views Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- View Controllers Slice Interpolation Bug1926
- Slicer4Minute
- label Toggle Bug2049
Unspecified === Unspecified
Utilities === Utilities
BRAINS ==== BRAINS
Wizards === Wizards
Work in Progress === Work in Progress
Converters ==== Converters
Informatics ==== Informatics
TestCases ===== TestCases
XNATSlicer === XNATSlicer
Modules by contributing organization
Contributing organizations:
- Asclepios INRIA
- AZE R&D
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- BWH/UAB
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Institute of Technology
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, Inc.
- Isomics, pieper@isomics.com
- Kitware
- Kitware)
- MGH
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MSC/NLM
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan, SPL
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- Stony Brook University
- SUMS
- Surgical Planning Lab
- UAB
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University College Cork
- University of Alabama Birmingham
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
Brigham and Women's Hospital
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Colors Scalar Bar Self Test
- Curve Maker
- Dice Computation
- DICOMRWVMPlugin
- Fast Grow Cut Effect
- Fiducial Layout Switch Bug1914
- Markups
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segmentation Aided Registration
- Volume Rendering Scene Close
- Window Level Effect
BWH, SPL
BWH, SUMS
BWH/UAB
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
CRTC
gatech
GE
- Add Scalar Volumes
- Charting
- Checker Board Filter
- Create DICOMSeries
- Curvature Anisotropic Diffusion
- Diffusion Tensor Test
- DWIConvert
- Execution Model Tour
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Histogram Matching
- Label Map Smoothing
- Median Image Filter
- Model Maker
- Model To Label Map
- Multiply Scalar Volumes
- Orient Scalar Volume
- Otsu Threshold Image Filter
- Pk Modeling
- Resample Scalar Volume
- Simple Region Growing Segmentation
- Slice Link Logic
- Slicer4Minute
- Spacing Aware Curvature Diffusion
- Subtract Scalar Volumes
- View Controllers
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter
Georgia Institute of Technology
Georgia Tech
IBM
Isomics
- Atlas Tests
- Binary Watershed Effect
- Compare Volumes
- Data
- Data Probe
- DICOM
- Editor
- Endoscopy
- fiber visibility crash2438
- Fiber Bundle To Label Map
- Label Statistics
- label Toggle Bug2049
- Landmark Registration
- Models
- Performance Tests
- Reporting
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data
- scene Import2428
- Self Tests
- Simple Filters
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter
- Tractography Interactive Seeding
- Transforms
- Vector To Scalar Volume
- View Controllers
- Volume Rendering
- Volumes
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, Inc.
Isomics, pieper@isomics.com
Kitware
- Cameras
- Colors
- Data
- Data Store
- Double Arrays
- Event Broker
- Expert Automated Registration
- Extension Wizard
- Extract Skeleton
- Fast Grow Cut
- Fast Grow Cut Segmenter
- fiber visibility crash2438
- Fiducial Registration
- Gaussian Blur Image Filter
- Image Maker
- label Toggle Bug2049
- Matlab Commander
- Matlab Module Generator
- Models
- Multi Volume Explorer
- Multi Volume Importer
- Port Placement
- Reformat
- Sample Data
- Scene Performance
- Simple Filters
- Slicer To Kiwi Exporter
- Threshold Scalar Volume
- Tractography Display
- Transforms
- Units
- View Controllers
- Volume Rendering
- Volumes
- Welcome
Kitware)
MGH
Moka Creative, LLC, kumar.sunil.p@gmail.com
MSC/NLM
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's
- Data
- Gel Dosimetry Analysis Algo
- Subject Hierarchy
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
Queen's University
- Perk Evaluator
- Python Metrics Calculator
- Scoliosis Monitoring
- Spinal Curvature Measurement
- Transform Recorder
- Volume Clip With Roi
- Workflow Segmentation
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SAIC-Frederick, NCI-Frederick
SBU
SCI Institute
Shiga University of Medical Science, Japan, SPL
SNR
SPL
- DICOM2Full Brain Tractography
- Label To DICOMSEGConverter Self Test
- Percutaneous Approach Analysis
- Pk Modeling
- Reporting Self Test
- Tracker Stabilizer
SPL B&W Harvard
SPL, BWH
- ACPCTransform
- Annotations
- BSpline To Deformation Field
- Cast Scalar Volume
- Colors
- Data
- Diffusion Tensor Scalar Measurements
- Diffusion Weighted Volume Masking
- DTIexport
- DTIimport
- DWITo DTIEstimation
- Fiducial Registration
- Grayscale Model Maker
- Image Label Combine
- Mask Scalar Volume
- Merge Models
- Model Maker
- Models
- Model To Label Map
- Multi Volume Explorer
- Multi Volume Importer
- N4ITKBias Field Correction
- PETStandard Uptake Value Computation
- PETSUVImage Maker
- Probe Volume With Model
- Reporting
- Robust Statistics Segmenter
- Scene Views
- SUVFactor Calculator
- TCIABrowser
- Test Grid Transform Registration
- Threshold Scalar Volume
- Tractography Label Map Seeding
- View Controllers
- Volume Rendering
- Volumes
- Welcome
SPL, BWH, UPenn
Stony Brook University
SUMS
Surgical Planning Lab
UAB
Uiowa
UIowa
UNC
- DWIRician LMMSEFilter
- Extract Skeleton
- Intensity Segmenter
- Port Placement
- Resample DTIVolume
- Resample Scalar Vector DWIVolume
Univ of Michigan
Univ. of Iowa
University College Cork
University of Alabama Birmingham
University of Heidelberg
University of Iowa
University of Iowa) and Andrey Fedorov (SPL
UPenn
Utah
UVa
UWA
WashU-St. Louis, dmarcus@wustl.edu
while at GE
Modules by contributing individual
Contributing individuals:
- Alex Yarmarkovich
- Ali Ghayoor
- Allen Tannenbaum
- and Hans Johnson.
- Beatriz Paniagua from Department of Orthodontics
- Brad Davis
- BWH
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Daniel Haehn
- Demian Wassermann
- Dinggang Shen
- Francois Budin
- Greg Harris
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- Ivan Kolesov
- Kilian Pohl
- Lauren O'Donnell
- Liangjia Zhu
- Luping Fang
- Matt Lougheed
- Neuro Image Resarch and Analysis Laboratory
- Patricio Vela
- Peter Karasev
- Peter Savadjiev
- Polina Golland
- Qing Pan
- the University of North Carolina at Chapel Hill
- UNC Medical School
- Uof M School of Dentistry
- Uof M School Of Dentistry
- Xiaofeng Liu
- Yumin Yuan
- Akila Viswanathan
- Alan Morris
- Alex Yarmakovich
- Alex Yarmarkovich
- Ali Ghayoor
- Alireza Mehrtash
- Allen Tannenbaum
- and Ron Kikinis
- and Steve Pieper
- Andinet Enquobahrie
- Andras Lasso
- Andreas Freudling
- Andrey Fedorov
- Andriy Kot
- Anonymous
- Antonio Damato
- Antonio Tristan Vega
- Arie Nakhmani
- Atsushi Yamada
- Benjamin Long
- Bill Lorensen
- Bradley Lowekamp
- Bradley Lowekamp and Bill Lorensen
- Casey B Goodlett
- Charles Marion
- Csaba Pinter
- Dan Marcus
- Daniel Blezek
- Daniel Haehn
- Danny Perry
- Demian Wassermann
- Dirk Padfield
- Dominik Meier
- Ethan Ulrich
- Fotis Drakopoulos
- Francois Budin
- Franklin King
- Greg Gardner
- Guido Gerig
- Guillaume Pernelle
- Hans J. Johnson
- Hans Johnson
- Ivan Kolesov
- Jan Egger
- Jayender Jagadeesan
- Jean-Baptiste Berger
- Jean-Christophe Fillion-Robin
- Jim Miller
- Johan Andruejol
- John Evans
- Jonathan Bronson
- Josh Cates
- Joy Matsui
- Julien Finet
- Julien Jomier
- Junichi Tokuda
- Kent Williams
- Kevin Wang
- Kilian Pohl
- Koichiro Murakami
- Lauren Barber
- Lauren O'Donnell
- Laurent Chauvin
- Liang-Jia Zhu
- Liangjia Zhu
- Luca Antiga
- Luis G. Torres
- Marc Niethammer
- Marcel Prastawa prastawa@sci.utah.edu
- Mark Scully
- Markus Van Tol
- Martin Styner
- Matthew Holden
- Matthew S. Holden
- Matthew Woehlke
- Michael Jeulin-Lagarrigue
- Minjeong Kim
- Nabgha Fahrat
- Nicholas Herlambang
- Nick Tustison
- Nicole Aucoin
- Nigel Goh
- Nikos Chrisochoides
- Olivier Clatz
- Pat Marion
- Paul Mercea
- Pengdong Xiao
- Peter Black
- Peter Karasev
- Pierre Seroul
- Pietro Nardelli
- Raul San Jose
- Rob Mac Leod
- Ron Kikinis
- Ross Whitaker
- Ruifeng Chen
- Sam Song
- Sandy Wells
- Santiago Aja Fernandez
- Sebastien Barré
- Sebastien Barre
- Shigeyuki Naka
- Soichiro Tani
- Sonia Pujol
- Stephen Aylward
- Stephen R Aylward
- Steve Pieper
- Sunil Kumar
- Sylvain Bouix
- Tamas Ungi
- This tool was developed by Hans J. Johnson and Greg Harris.
- This tool was developed by Hans Johnson.
- This tool was developed by Kent Williams.
- This tool was developed by Vincent Magnotta
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani
- Vince Magnotta
- Vincent A. Magnotta
- Vinicius Boen
- Vinicius Boen and Mason Winsauer
- Wendy Plesniak
- Xiaodong Tao
- Xiaojun Chen
- Yanling Liu
- Yi Gao
- Yinglin Lee
- Yingxuan Zhu
- Yixun Liu
- Yong Zhang
Alex Yarmarkovich
Ali Ghayoor
Allen Tannenbaum
and Hans Johnson.
Beatriz Paniagua from Department of Orthodontics
Brad Davis
BWH
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
Daniel Haehn
Demian Wassermann
Dinggang Shen
Francois Budin
Greg Harris
hans-johnson -at- uiowa.edu
http://www.psychiatry.uiowa.edu
Ivan Kolesov
Kilian Pohl
Lauren O'Donnell
Liangjia Zhu
Luping Fang
Matt Lougheed
Neuro Image Resarch and Analysis Laboratory
Patricio Vela
Peter Karasev
Peter Savadjiev
Polina Golland
Qing Pan
the University of North Carolina at Chapel Hill
UNC Medical School
UofM School of Dentistry
UofM School Of Dentistry
Xiaofeng Liu
Yumin Yuan
Akila Viswanathan
Alan Morris
Alex Yarmakovich
Alex Yarmarkovich
Ali Ghayoor
Alireza Mehrtash
Allen Tannenbaum
and Ron Kikinis
and Steve Pieper
Andinet Enquobahrie
Andras Lasso
- Matlab Commander
- Matlab Module Generator
- Metafile Importer
- Py Dev Remote Debug
- Sequence Browser
- Sequences
- Transforms
- Volume Clip With Model
- Volume Clip With Roi
Andreas Freudling
Andrey Fedorov
- Body Centric Cubic Mesh
- BSpline To Deformation Field
- Change Tracker
- Change Tracker Self Test
- Crop Volume
- DICOMRWVMPlugin
- DICOMSegmentation Plugin
- Intensity Difference Metric
- Label To DICOMSEGConverter
- Label To DICOMSEGConverter Self Test
- Mesh Compression
- Multi Volume Explorer
- Multi Volume Importer
- Multi Volume Importer Plugin
- N4ITKBias Field Correction
- PBNRR
- Pk Modeling
- Reporting
- Reporting Self Test
- SUVFactor Calculator
- TCIABrowser
- Window Level Effect
Andriy Kot
Anonymous
Antonio Damato
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter
- DWIRician LMMSEFilter
- DWIUnbiased Non Local Means Filter
- Finsler Backtracing
- Finsler Tractography
Arie Nakhmani
Atsushi Yamada
Benjamin Long
Bill Lorensen
- Add Scalar Volumes
- Checker Board Filter
- Create DICOMSeries
- Curvature Anisotropic Diffusion
- Diffusion Tensor Test
- Execution Model Tour
- Gradient Anisotropic Diffusion
- Grayscale Fill Hole Image Filter
- Grayscale Grind Peak Image Filter
- Grayscale Model Maker
- Histogram Matching
- Median Image Filter
- Model Maker
- Multiply Scalar Volumes
- Orient Scalar Volume
- Otsu Threshold Image Filter
- Resample Scalar Volume
- Subtract Scalar Volumes
- Swiss Skull Stripper
- Voting Binary Hole Filling Image Filter
Bradley Lowekamp
- Bin Shrink
- Double Threshold Effect
- IASEMImport
- IASEMImport Series
- Label Object Statistics
- Simple Filters
Bradley Lowekamp and Bill Lorensen
Casey B Goodlett
Charles Marion
Csaba Pinter
- Data
- Gel Dosimetry Analysis Algo
- Subject Hierarchy
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
Dan Marcus
Daniel Blezek
Daniel Haehn
Danny Perry
Demian Wassermann
- DICOM2Full Brain Tractography
- Diffusion Weighted Volume Masking
- Fiber Bundle Label Select
- test tractography display
- Tractography Label Map Seeding
Dirk Padfield
Dominik Meier
Ethan Ulrich
Fotis Drakopoulos
Francois Budin
Franklin King
Greg Gardner
Guido Gerig
Guillaume Pernelle
Hans J. Johnson
Hans Johnson
Ivan Kolesov
Jan Egger
Jayender Jagadeesan
Jean-Baptiste Berger
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store
- Fast Grow Cut
- Fast Grow Cut Segmenter
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander
- Matlab Module Generator
- Multi Volume Explorer
- Multi Volume Importer
- Sample Data
- Simple Filters
- Slicer To Kiwi Exporter
- Transforms
- View Controllers
- Welcome
Jim Miller
- Charting
- Pk Modeling
- Simple Region Growing Segmentation
- Slice Link Logic
- Slicer4Minute
- View Controllers
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
John Evans
Jonathan Bronson
Josh Cates
Joy Matsui
Julien Finet
- Cameras
- Colors
- Data
- Double Arrays
- Event Broker
- Image Maker
- Models
- Multi Volume Explorer
- Multi Volume Importer
- Scene Performance
- Threshold Scalar Volume
- Tractography Display
- Transforms
- Units
- Volume Rendering
- Volumes
Julien Jomier
Junichi Tokuda
Kent Williams
Kevin Wang
Kilian Pohl
Koichiro Murakami
Lauren Barber
Lauren O'Donnell
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luca Antiga
Luis G. Torres
Marc Niethammer
Marcel Prastawa prastawa@sci.utah.edu
Mark Scully
Markus Van Tol
Martin Styner
Matthew Holden
Matthew S. Holden
Matthew Woehlke
Michael Jeulin-Lagarrigue
Minjeong Kim
Nabgha Fahrat
Nicholas Herlambang
Nick Tustison
Nicole Aucoin
- ACPCTransform
- Add Many Markups Fiducial Test
- Annotations
- Cast Scalar Volume
- Colors
- Colors Scalar Bar Self Test
- Data
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker
- Markups
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume
- Merge Models
- Model Maker
- Models
- Model To Label Map
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation
- PETSUVImage Maker
- Reporting
- Scene Views
- SUVFactor Calculator
- Threshold Scalar Volume
- Volume Rendering Scene Close
- Volumes
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Pierre Seroul
Pietro Nardelli
Raul San Jose
Rob MacLeod
Ron Kikinis
- ACPCTransform
- Cast Scalar Volume
- Change Tracker
- Crop Volume
- Mask Scalar Volume
- Merge Models
- Model Maker
- Multi Volume Explorer
- Multi Volume Importer
- N4ITKBias Field Correction
- PETStandard Uptake Value Computation
- PETSUVImage Maker
- Robust Statistics Segmenter
- Surface Toolbox
- SUVFactor Calculator
- Threshold Scalar Volume
- View Controllers
- Volume Rendering
Ross Whitaker
Ruifeng Chen
Sam Song
Sandy Wells
Santiago Aja Fernandez
Sebastien Barré
Sebastien Barre
Shigeyuki Naka
Soichiro Tani
Sonia Pujol
Stephen Aylward
Stephen R Aylward
Steve Pieper
- Atlas Tests
- Binary Watershed Effect
- Compare Volumes
- Data Probe
- DICOM
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Editor
- Endoscopy
- fiber visibility crash2438
- Fiber Bundle To Label Map
- Label Statistics
- label Toggle Bug2049
- Landmark Registration
- Multi Volume Explorer
- Multi Volume Importer
- Performance Tests
- Reporting
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data
- scene Import2428
- Self Tests
- Simple Filters
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter
- Threshold Threading Test
- Vector To Scalar Volume
- View Controllers
- Volumes
- Xnat Slicer
Sunil Kumar
Sylvain Bouix
Tamas Ungi
- Perk Evaluator
- Python Metrics Calculator
- Scoliosis Monitoring
- Spinal Curvature Measurement
- Transform Recorder
- Workflow Segmentation
This tool was developed by Hans J. Johnson and Greg Harris.
This tool was developed by Hans Johnson.
This tool was developed by Kent Williams.
This tool was developed by Vincent Magnotta
Tina Kapur
Tobias Penzkofer
Tohru Tani
Vince Magnotta
Vincent A. Magnotta
Vinicius Boen
Vinicius Boen and Mason Winsauer
Wendy Plesniak
- Annotations
- PETStandard Uptake Value Computation
- PETSUVImage Maker
- Scene Views
- SUVFactor Calculator
- View Controllers
- Welcome
Xiaodong Tao
Xiaojun Chen
Yanling Liu
Yi Gao
- Carrera Slice Effect
- Fast Grow Cut Effect
- i Gyne
- LAScar Segmenter
- Needle Finder
- Robust Statistics Segmenter
- Segmentation Aided Registration
Yinglin Lee
Yingxuan Zhu
Yixun Liu
Yong Zhang
Extensions by name
- ABC
- Airway Segmentation
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Builder
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Erode Dilate Label
- Faceted Visualizer
- Fast Grow Cut Effect
- Fiber Viewer Light
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- hough Transform CLI
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- LASegmenter
- Light Weight Robot IGT
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Model Clip
- Model To Model Distance
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- RSSExtension
- Scoliosis
- Segmentation Aided Registration
- Shape Population Viewer
- Skull Stripper
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- SPHARM-PDM
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by category
Categories:
- Cardiac
- Cardiac MRI toolkit
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Exporter
- Filtering
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Multidimensional data
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Shape Analysis
- Surface Models
- Tractography
- Training
- Utilities
- Vascular Modeling Toolkit
- Wizards
Cardiac === Cardiac
Cardiac MRI toolkit === Cardiac MRI toolkit
Converters === Converters
Developer Tools === Developer Tools
Diffusion === Diffusion
Editor Effects === Editor Effects
Exporter === Exporter
Filtering === Filtering Morphology ==== Morphology
IGT === IGT
- Port Placement
- Light Weight Robot IGT
- Gyro Guide
- Corner Annotation
- i Gyne
- Slicer IGT
- Percutaneous Approach Analysis
- Needle Finder
- Tracker Stabilizer
- Resection Planner
Informatics === Informatics
Mesh Generation === Mesh Generation
Microscopy === Microscopy
Multidimensional data === Multidimensional data
Quantification === Quantification
Radiotherapy === Radiotherapy
Registration === Registration
Remote === Remote
Scoliosis === Scoliosis
Segmentation === Segmentation
- Open CAD
- Swiss Skull Stripper
- Carrera Slice
- Skull Stripper
- Airway Segmentation
- hough Transform CLI
- LAScar Segmenter
- RSSExtension
- ABC
- MABMIS
- Sobolev Segmenter
- LASegmenter
- Fast Grow Cut Effect
- Intensity Segmenter
- Volume Clip
Shape Analysis === Shape Analysis
Surface Models === Surface Models
Tractography === Tractography
Training === Training
Utilities === Utilities
Vascular Modeling Toolkit === Vascular Modeling Toolkit
Wizards === Wizards
Extensions by contributing organization
Contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Boston Childrens Hospital
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- GE
- GE GLobal Research
- GT
- Isomics
- Kitware
- LUH
- Massachusetts General Hospital
- Moka Creative LLC, Washington University in St. Louis
- NIRAL, UNC
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UIowa
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- University of Utah
- Utah
- UWA
- Washington University in St. Louis
- yogesh@bwh.harvard.edu
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Boston Childrens Hospital
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Light Weight Robot IGT
- Open CAD
- Pk Modeling
- RSSExtension
- Segmentation Aided Registration
- Tracker Stabilizer
BWH & MGH
BWH, SPL
BWH/UAB
CARMA
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
GE
GE GLobal Research
GT
Isomics
Kitware
LUH
Massachusetts General Hospital
Moka Creative LLC, Washington University in St. Louis
NIRAL, UNC
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SPL
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- LASegmenter
- RSSExtension
- Segmentation Aided Registration
- Sobolev Segmenter
UIowa
UNC
- CMFreg
- DTIAtlas Builder
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Fiber Viewer Light
- MABMIS
- Model To Model Distance
- Port Placement
- SPHARM-PDM
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
University of Utah
Utah
UWA
Washington University in St. Louis
yogesh@bwh.harvard.edu
Extensions by contributing individual
Contributing individuals:
- Alireza Mehrtash
- Allen Tannenbaum
- Akila Viswanathan
- Alex Yarmarkovich
- Alireza Mehrtash
- Allen Tannenbaum
- Andre Mastmeyer
- Antonio Damato
- Carl-Fredrik Westin
- Carl-Fredrik Westin.
- Christian Baumgartner
- Hans Johnson
- Ipek Oguz
- Ivan Kolesov
- Jan Egger
- Jiashu Zhang
- Kent Williams
- Lauren Barber
- Liangjia Zhu
- Luping Fang
- Martin Styner
- Matt Lougheed
- Matthew S. Holden
- Nabgha Fahrat
- Patricio Vela
- Peter Savadjiev
- Qing Pan
- Ryan Eckbo
- Sam Song
- Sandy Wells
- Tina Kapur
- Tobias Penzkofer
- Xiaojun CHEN
- Xiaojun Chen
- Yi Gao
- Yinpeng Li
- Yundi Shi
- Adrien Kaiser
- Alan Morris
- Alexis Girault
- Alireza Mehrtash
- Allen Tannenbaum
- and Ron Kikinis
- Andinet Enquobahrie
- Andras Lasso
- Andrey Fedorov
- Andriy Fedorov
- Andriy Kot
- Antonio Tristan-Vega
- Arie Nakhmani
- Arnaud Gelas
- Atsushi Yamada
- Beatriz Paniagua
- Bill Lorensen
- Bradley Lowekamp
- Brig Bagley
- Csaba Pinter
- Dan Marcus
- Daniel Haehn
- Danny Perry
- Demian Wasssermann
- Dinggang Shen
- Ethan Ulrich
- Eugene Kholmovski
- Fotis Drakopoulos
- Francois Budin
- Franklin King
- Greg Gardner
- Greg Sharp
- Guillaume Pernelle
- Hans Johnson
- Harini Veeraraghavan
- Ivan Kolesov
- Jayender Jagadeesan
- Jean-Christophe Fillion-Robin
- Jennifer Andrea
- Jessica Forbes
- Jim Miller
- Jonathan Bronson
- Josh Cates
- Julien Finet
- Juliette Pera
- Jun LIN
- Junichi Tokuda
- Karl Fritscher
- Kevin Wang
- Kilian Pohl
- Koichiro Murakami
- Laurent Chauvin
- Liang-Jia Zhu
- Liangjia Zhu
- Luca Antiga
- Luis G. Torres
- Mahnaz Maddah
- Manson Winsauer
- Marcel Prastawa
- Martha Shenton
- Martin Styner
- Matt Lougheed
- Mattea Welch
- Matthew Holden
- Mauricio Reyes
- Ming-ching Chang
- Minjeong Kim
- Nicole Aucoin
- Nigel Goh
- Nikos Chrisochoides
- Olivier Clatz
- Pat Marion
- Paul Mercea
- Pengdong Xiao
- Peter Black
- Peter Karasev
- Pietro Nardelli
- Rick Herrick
- Rob Mac Leod
- Ron Kikinis
- Ruifeng Chen
- Salma Bengali
- Sebastian Tauscher
- Stefan Bauer
- Stefan Lienhard
- Steve Pieper
- Sunil Kumar
- Sylvain Bouix
- Tamas Ungi
- Thomas Fejes
- Vinicius Boen
- Vivek Narayan
- Xiaodong Tao
- Xiaofeng Liu
- Xiaolei Chen
- Yi Gao
- Yingxuan Zhu
- Yixun Liu
- Yogesh Rathi
Alireza Mehrtash
Allen Tannenbaum
Akila Viswanathan
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
Andre Mastmeyer
Antonio Damato
Carl-Fredrik Westin
Carl-Fredrik Westin.
Christian Baumgartner
Hans Johnson
Ipek Oguz
Ivan Kolesov
Jan Egger
Jiashu Zhang
Kent Williams
Lauren Barber
Liangjia Zhu
Luping Fang
Martin Styner
Matt Lougheed
Matthew S. Holden
Nabgha Fahrat
Patricio Vela
Peter Savadjiev
Qing Pan
Ryan Eckbo
Sam Song
Sandy Wells
Tina Kapur
Tobias Penzkofer
Xiaojun CHEN
Xiaojun Chen
Yi Gao
Yinpeng Li
Yundi Shi
Adrien Kaiser
Alan Morris
Alexis Girault
Alireza Mehrtash
Allen Tannenbaum
and Ron Kikinis
Andinet Enquobahrie
Andras Lasso
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PETDICOMExtension
- Reporting
- TCIABrowser
- Window Level Effect
Andriy Fedorov
Andriy Kot
Antonio Tristan-Vega
Arie Nakhmani
Arnaud Gelas
Atsushi Yamada
Beatriz Paniagua
Bill Lorensen
Bradley Lowekamp
Brig Bagley
Csaba Pinter
Dan Marcus
Daniel Haehn
Danny Perry
Demian Wasssermann
Dinggang Shen
Ethan Ulrich
Eugene Kholmovski
Fotis Drakopoulos
Francois Budin
- DTIAtlas Fiber Analyzer
- DTIPrep
- DTIProcess
- Fiber Viewer Light
- Intensity Segmenter
- Model To Model Distance
- SPHARM-PDM
Franklin King
Greg Gardner
Greg Sharp
Guillaume Pernelle
Hans Johnson
Harini Veeraraghavan
Ivan Kolesov
Jayender Jagadeesan
Jean-Christophe Fillion-Robin
Jennifer Andrea
Jessica Forbes
Jim Miller
Jonathan Bronson
Josh Cates
Julien Finet
Juliette Pera
Jun LIN
Junichi Tokuda
Karl Fritscher
Kevin Wang
Kilian Pohl
Koichiro Murakami
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luca Antiga
Luis G. Torres
Mahnaz Maddah
Manson Winsauer
Marcel Prastawa
Martha Shenton
Martin Styner
Matt Lougheed
Mattea Welch
Matthew Holden
Mauricio Reyes
Ming-ching Chang
Minjeong Kim
Nicole Aucoin
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Pietro Nardelli
Rick Herrick
Rob MacLeod
Ron Kikinis
Ruifeng Chen
Salma Bengali
Sebastian Tauscher
Stefan Bauer
Stefan Lienhard
Steve Pieper
Sunil Kumar
Sylvain Bouix
Tamas Ungi
Thomas Fejes
Vinicius Boen
Vivek Narayan
Xiaodong Tao
Xiaofeng Liu
Xiaolei Chen
Yi Gao
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- LASegmenter
- RSSExtension
- Segmentation Aided Registration
