Documentation/Nightly/Modules/FiberBundleToLabelMap

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Introduction and Acknowledgements

Title: Fiber Bundle to Label Map Author(s)/Contributor(s): Steve Pieper (SPL, Isomics, Inc.), Isaiah Norton (SPL, LMI, BWH, SlicerDMRI) License: 3D Slicer Contribution and Software License Agreement Acknowledgements: The SlicerDMRI developers gratefully acknowledge funding for this project provided by NIH NCI ITCR U01CA199459 (Open Source Diffusion MRI Technology For Brain Cancer Research), NIH P41EB015898 (National Center for Image-Guided Therapy) and NIH P41EB015902 (Neuroimaging Analysis Center), as well as the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Contact: slicer-users@bwh.harvard.edu Website: http://slicerdmri.github.io/

SlicerDMRI   Surgical Planning Laboratory   NAC   Corpus callosum (CC) tracts   Label map from the corpus callosum (CC) tracts.

Module Description

Example of the label map generated from a set of fibers

This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle.

This module first upsamples points along the fiber bundle in order to get better voxel coverage.

Panels and their use

• Fiber Bundle
  • Pick a fiber bundle to rasterize
• Target Label Map
  • The fibers will be painted into this label map. Note that this will add to and overwrite existing data, but does not clear the label map to zero first.
• Label Value
  • Numerical value to be written into the label map.

Similar Modules

Model To Label Map

References

• http://slicerdmri.github.io/

Information for Developers

This is a python scripted module.

• https://github.com/SlicerDMRI