Documentation/Nightly/Extensions/PETTumorSegmentation

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Introduction and Acknowledgements

Acknowledgments: This work is funded in part by Quantitative Imaging to Assess Response in Cancer Therapy Trials NIH grant U01-CA140206 and Quantitative Image Informatics for Cancer Research (QIICR) NIH grant U24 CA180918. Contributors: Christian Bauer (University of Iowa), Markus van Tol (University of Iowa), Ethan Ulrich (University of Iowa), Reinhard Beichel (University of Iowa), John Buatti (University of Iowa) Contact: Christian Bauer, <email>christian-bauer@uiowa.edu</email> License: Slicer License

The University of Iowa (UIowa)   Quantitative Image Informatics for Cancer Research   National Alliance for Medical Image Computing (NA-MIC)

Extension Description

Segmentation of tumors and hot lymph nodes in PET scans. The software is based on the thesis of Markus L. van Tol (2014): "A Graph-Based Method for Segmentation of Tumors and Lymph Nodes in Volumetric PET Images" and implemented as a Slicer Editor Effect.

Modules

• PET Tumor Segmentation Editor Effect
• PETTumorSegmentation Plugin: This plugin provides the functionality used by the editor effect for the actual processing. It is hidden from the GUI and not intended to be used directly.

Information for Developers

• Source code: https://github.com/chribaue/PETTumorSegmentation