Documentation/4.4/Extensions/FiberViewerLight

For the latest Slicer documentation, visit the read-the-docs.

Introduction and Acknowledgements

Author: Francois Budin
Contributors: Jean-Baptiste Berger (NIRAL, University of North Carolina), Clement Vachet (SCI Institute, University of Utah), Francois Budin (NIRAL, University of North Carolina), Martin Styner (NIRAL, University of North Carolina)
Contact: Francois Budin, <email>fbudin@unc.edu</email>
Website: http://www.nitrc.org/projects/fvlight/
License: Apache License, Version 2.0

• 

  NIRAL

• 

  UNC

• 

  NAMIC

Extension Description

Quick Tour of Features and Use

FiberViewerLight is a light version of FiberViewer. It is used for fiber clustering thanks to methods such as Length, Gravity, Hausdorff, or Mean Distribution and Normalized Cut.

A list panels in the interface, their features, what they mean, and how to use them.

Parameters: input [--input] [-i]: VTK Input File output [--output] [-o]: Output Folder nogui [--nogui] : If this option is used, you will use the command line, DEFAULT=false Default value: false use_danielsson_transform [--use_danielsson_transform] : If this option is used, computation will use Danielsson Transformation to calculate distances Default value: false List of processes used for computation [--process_list] : List of comma separated methods that will be computed and which distance tables will be saved (Gravity,Mean,Hausdorff,NormCut) Number of voxels on the x axis [--x_voxels] : Number of voxels on the x axis for the Danielsson Transform. Nb of voxels for others axis will be calculate to keep the original ratio. By default it will use a spacing of 1 Default value: -1

User Interface

Use Cases

• 

  Screenshot

• 

  Parametrization plane

• 

  Gravity

Similar Extensions

N/A

Information for Developers

More information as well as the source code can found on the project webpage: http://www.nitrc.org/projects/fvlight/