Documentation/Labs/TutorialTesting/4.3-Release

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Home < Documentation < Labs < TutorialTesting < 4.3-Release

Overview

You will find below on section for each tutorial listed here. After testing a tutorial, report in the appropriate section the operating system, Slicer revision and remarks.

General Introduction

Slicer Welcome Tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: OK

Notes

1 / [Yuzheng]: There are 11 sample datasets as of now and there was only 6 in the tutorial.

Slicer4Minute Tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: OK

Notes

1 / [Chrystel]: Scene is loading automatically and no add volume in file menu (add data)

2 / [Yuzheng]: Icon has changed: (on slide 22) The spin icon represents 'yaw the view of the scene' now instead of 'spin the 3D view' shown in tutorial. One click won't start spinning the model, but yaw the model once.


Slicer4 Data Loading and 3D Visualization

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: See below notes.

Notes

1 / [Chrystel]: Menu has changed, there is no tab Material Properties anymore

2 / [Yuzheng]: Menu has changed: no add volume and add scence in file menu (add data)

3 / [Yuzheng]: Error messages in standard output 

when loading 3DHeadScene.mrml (tutorial slice 19), get the following:

ERROR: In .../Slicer/Libs/MRML/Core/vtkMRMLSceneViewStorageNode.cxx, line 82
vtkMRMLSceneViewStorageNode (0x4295b10): ReadDataInternal: file does not exist:.../3DVisualizationData/3DVisualizationData/3DHeadData/Axial.png

ERROR: In .../Slicer/Libs/MRML/Core/vtkMRMLSceneViewStorageNode.cxx, line 82
vtkMRMLSceneViewStorageNode (0x4295e90): ReadDataInternal: file does not exist: .../3DVisualizationData/3DVisualizationData/3DHeadData/Sagittal .png

ERROR: In /home/yuzheng/Source/Slicer/Libs/MRML/Core/vtkMRMLSceneViewStorageNode.cxx, line 82
vtkMRMLSceneViewStorageNode (0x4296420): ReadDataInternal: file does not exist: .../3DVisualizationData/3DVisualizationData/3DHeadData/Coronal .png

4 / [Yuzheng]: Additional .vtk suffix and possible error messages in standard output 

When saving a scene (tutorial slide 62), the default vtk file name has two vtk suffix, e.g. left_eyeball.vtk.vtk.
If these vtk files are not saved as instructed in the tutorial, then the following errors will be shown in output when scene is restored (tutorial page 66)

ERROR: In .../Slicer/Libs/MRML/Core/vtkMRMLModelStorageNode.cxx, line 114
vtkMRMLModelStorageNode (0x3ced680): ReadDataInternal: model file '.../3DVisualizationData/3DVisualizationData/3DHeadData/left_eyeball.vtk.vtk' not found.

5 / [Yuzheng]: Additional white space in default file name 

When saving a scene (tutorial slide 62), there exists additional white space in these two default file names:
'Sagittal .png' and 'Coronal .png'

Tutorials for software developers

Slicer4 Programming Tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: OK

Specific functions

Slicer4 Diffusion Tensor Imaging Tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: See below notes

Notes

1 / [Chrystel]: Tractography Fiducial Seeding module doesn't exist ( choose Tractography Interactive Seeding).

2 / [Yuzheng]: In slide 70, advanced display tab is broken, so operations in slice 70-75 cannot be reproduced.

Slicer4 Neurosurgical Planning Tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: OK
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: OK

Notes

1 / [Chrystel]: Tractography Fiducial Seeding module doesn't exist ( choose Tractography Interactive Seeding )

Slicer4 3D Visualization of DICOM images for Radiology Applications

  • r22128 / Windows7 / 64-bit / Chrystel: see below notes
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: see below notes

Notes

1 / [Chrystel]: when Scene-liver.mrml is loaded, in Slide 80, nothing appears in tab Scene so the operations in slide 80-88 cannot be reproduced.

Slicer4 Quantitative Imaging tutorial

  • r22128 / Windows7 / 64-bit / Chrystel: see below notes
  • r22159 / Ubuntu 12.04 / 64-bit / Yuzheng: see below notes

Notes

1 / [Chrystel]: Slide 65, ChangeTracker Module is missing (apparently an extension now).

2 / [Yuzheng]: Slide 49, SUV computation Module is missing (changed to an extension?), so operations in slide 49-54 cannot be reproduced.

3 / [Yuzheng]: Slide 58, Fiducials Module is missing (remamed? extension?).

4 / [Yuzheng]: Slide 59, Measurments Module is missing (remamed? extension?).

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