Documentation/4.0/SlicerApplication/LookupTables

Overview

Slicer offers a variety of predefined lookup tables (LUT).

LUTs

• 

  Discrete Luts

• 

  Shade Luts

• 

  Tint Luts

• 

  Freesurfer Luts

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  PET Luts

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  Cartilage MRI Luts

• 

  Labelmap Luts

• 

  Generic Labelmap Luts

Slicer ColorPicker

The slicer colorpicker allows to select colors from a label map and to assign them to objects such as surface models or streamlines

LUTs for Charting

Please see the separate page

Custom LUTs

It is relatively easy to create custom LUTs by creating a table with the colors on the wiki. This allows to select specific names and colors when segmenting. See below for an example.

integer_label	text_label	color	notes
0	background	rgba(0,0,0,0)
1	tissue	rgb(128,174,128)	Default label for bodily tissues
2	bone	rgb(241,214,145)
3	skin	rgb(177,122,101)
4	connective tissue	rgb(111,184,210)

• Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
• Go here to create a text file in Slicer LUT format.
• A custom LUT can be loaded into Slicer like any other file.