Slicer3:Mori-Atlas labels
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- Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
- Go here to create a text file in Slicer LUT format. WARNING: the conversion fails on the alpha channel if using rgba(R, G, B, 255) instead of rgb(R, G, B) or rgba(R, G, B, 1.0). If the last column of the generated text file contains 65025, change it to 255.
- Slicer3:Mori-Atlas_labels_JHU-MNI_SS_Type-I
- Slicer3:Mori_Atlas_labels_JHU-MNI_SS_Type-II
- Slicer3:Mori_Atlas_labels_JHU-MNI_SS_Type-III
- List
Look-up Table for the Mori WM Atlas labels
Work in progress.
| integer_label | text_label | color |
|---|---|---|
| 0 | Background | rgba(0,0,0,0) |
| 1 | MCP_Middle_cerebellar_peduncle | gold |
| 2 | PCT_Pontine_crossing_tract_(a_part_of_MCP) genotype | navajowhite |
| 3 | GCC_Genu_of_corpus_callosum | plum |
| 4 | BCC_Body_of_corpus_callosum | pink |
| 5 | SCC_Splenium_of_corpus_callosum | deeppink |
| 6 | FX_Fornix_(column_and_body_of_fornix) | peru |
| 7 | CST-R_Corticospinal_tract_right | tan |
| 8 | CST-L_Corticospinal_tract_left | tan |
| 9 | ML-R_Medial_lemniscus_right | mediumspringgreen |
| 10 | ML-L_Medial_lemniscus_left | mediumspringgreen |
| 11 | ICP-R_Inferior_cerebellar_peduncle_right | palegreen |
| 12 | ICP-L_Inferior_cerebellar_peduncle_left | palegreen |
| 13 | SCP-R_Superior_cerebellar_peduncle_right | bisque |
| 14 | SCP-L_Superior_cerebellar_peduncle_left | bisque |
| 15 | CP-R_Cerebral_peduncle_right | khaki |
| 16 | CP-L_Cerebral_peduncle_left | khaki |
| 17 | ALIC-R_Anterior_limb_of_internal_capsule_right | lightskyblue |
| 18 | ALIC-L_Anterior_limb_of_internal_capsule_left | lightskyblue |
| 19 | PLIC-R_Posterior_limb_of_internal_capsule_right | dodgerblue |
| 20 | PLIC-L_Posterior_limb_of_internal_capsule_left | dodgerblue |
| 21 | RLIC-R_Retrolenticular_part_of_internal_capsule_right | deepskyblue |
| 22 | RLIC-L_Retrolenticular_part_of_internal_capsule_left | deepskyblue |
| 23 | ACR-R_Anterior_corona_radiata_right | powderblue |
| 24 | ACR-L_Anterior_corona_radiata_left | powderblue |
| 25 | SCR-R_Superior_corona_radiata_right | blue |
| 26 | SCR-L_Superior_corona_radiata_left | blue |
| 27 | PCR-R_Posterior_corona_radiata_right | skyblue |
| 28 | PCR-L_Posterior_corona_radiata_left | skyblue |
| 29 | PTR-R_Posterior_thalamic_radiation_(include_optic_radiation)_right | sandybrown |
| 30 | PTR-L_Posterior_thalamic_radiation_(include_optic_radiation)_left | sandybrown |
| 31 | SS-R_Sagittal_stratum_(include_inferior_longitidinal_fasciculus_and_inferior_fronto-occipital_fasciculus)_right | peachpuff |
| 32 | SS-L_Sagittal_stratum_(include_inferior_longitidinal_fasciculus_and_inferior_fronto-occipital_fasciculus)_left | peachpuff |
| 33 | EC-R_External_capsule_right | darksalmon |
| 34 | EC-L_External_capsule_left | darksalmon |
| 35 | CGC-R_Cingulum_(cingulate_gyrus)_right | mediumseagreen |
| 36 | CGC-L_Cingulum_(cingulate_gyrus)_left | mediumseagreen |
| 37 | CGH-R_Cingulum_(hippocampus)_right | darkkhaki |
| 38 | CGH-L_Cingulum_(hippocampus)_left | darkkhaki |
| 39 | FX-R_Fornix_Stria_terminalis_right | darkgoldenrod |
| 40 | FX-L_Fornix_Stria_terminalis_left | darkgoldenrod |
| 41 | SLF-R_Superior_longitudinal_fasciculus_right | lightgray |
| 42 | SLF-L_Superior_longitudinal_fasciculus_left | lightgray |
| 43 | SFO-R_Superior_fronto-occipital_fasciculus_right | darkgrey |
| 44 | SFO-R_Superior_fronto-occipital_fasciculus_left | darkgrey |
| 45 | IFO-R_Inferior_fronto-occipital_fasciculus_right | gray |
| 46 | IFO-L_Inferior_fronto-occipital_fasciculus_left | gray |
| 47 | UNC-R_Uncinate_fasciculus_right | brown |
| 48 | UNC-L_Uncinate_fasciculus_left | brown |
| 49 | TAP-R_Tapetum_right | mistyrose |
| 50 | TAP-L_Tapetum_left | mistyrose |
