Stanford Simbios group

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Home < Stanford Simbios group

Contents

1 Aim
2 Process Flowchart
3 Progress
- 3.1 Atlas Generation from Input MR Images
- 3.2 Register Images
  - 3.2.1 Register Images Module in Slicer
4 Datasets

Aim

To develop a generic semi-automatic segmentation toolkit to convert images of musculoskeletal structures to 3D models.

Process Flowchart

Process Diagram.

Progress

Atlas Generation from Input MR Images

Model Generation from Input MR Images

Create a filled label map using PolyDataToFilledLabelMap module in slicer

EM Segmentation based on the atlas

Register Images

Register Images Module in Slicer

Datasets

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