EMSegmenter-Tasks:cineMRI
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Contents
Endiastole Cine MR Segmentation
Description
-- Data Assumption
-- description of pipeline with citations to algorithms used
Anatomical Tree
-- Define Anatomical Tree used in mrml file - first list the complete name and then the abbreviating used in the mrml file
- root
- background
- Myocardium
- Right Ventricle
- Left Ventricle
Atlas
Result
show original scans with segmentation as in the example below
Collaborators
Benoit Desjardins (UPenn)
Acknowledgment
The construction of the pipeline was supported by funding from NIH NCRR 2P41RR013218 Supplement.
Citations
- Pohl K, Bouix S, Nakamura M, Rohlfing T, McCarley R, Kikinis R, Grimson W, Shenton M, Wells W. A Hierarchical Algorithm for MR Brain Image Parcellation. IEEE Transactions on Medical Imaging. 2007 Sept;26(9):1201-1212.
