Modules:ExtractSubvolumeROI-Documentation-3.5

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Subvolume extraction with ROI widget

ExtractSubvolumeROI

Input and initialization of SubvolumeExtractROI

Visualization of the extracted subvolume

General Information

Module Type & Category

Type: Interactive

Category: Converters

Authors, Collaborators & Contact

• Andriy Fedorov, BWH
• Ron Kikinis, BWH
• Contact: Andriy Fedorov, fedorov at bwh

Module Description

This module allows to extract rectangular subvolume from an image, with the subvolume defined by Slicer ROI widget.

Usage

Examples, Use Cases & Tutorials

• Note use cases for which this module is especially appropriate, and/or link to examples.
• Link to examples of the module's use
• Link to any existing tutorials

Quick Tour of Features and Use

List all the panels in your interface, their features, what they mean, and how to use them. For instance: Input panel: Parameters panel: Output panel: Viewing panel:

ExtractSubvolumeROI control panel

Development

Major limitations:

• Input volume must be axis-aligned for consistent result.
• Neither input volume, nor ROI widget can be under a transform in MRML hierarchy

Dependencies

Volumes module.

Known bugs

Follow this link to the Slicer3 bug tracker.

Usability issues

Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.

Source code & documentation

Source code can accessed here

Links to documentation generated by doxygen.

More Information

Acknowledgment

Supported by Brain Science Foundation.