Documentation/4.4/Extensions/Reporting

For the latest Slicer documentation, visit the read-the-docs.

Introduction and Acknowledgements

Extension: Reporting Acknowledgments: This work is done as part of the Quantitative Imaging Network (QIN) initiative of the National Cancer Institute, and is funded by the National Institutes of Health, National Cancer Institute through the Grant U01 CA151261 (PI Fiona Fennessy). Author: Andrey Fedorov (SPL), Nicole Aucoin (SPL), Steve Pieper (SPL) Contact: Andrey Fedorov, fedorov at bwh dot harvard dot edu License: Slicer License

Surgical Planning Laboratory (SPL)   Isomics, Inc.   National Alliance for Medical Image Computing (NA-MIC)

Module Description

The purpose of the Reporting module is to provide Slicer interface for creating image annotations/markup that are stored in a structured form, and can be exported into Annotation Image Markup (AIM) XML-based format. Currently, Reporting module allows to create three types of markup: point (fiducial) 2-d measurement (ruler) 3-d segmentation (label map). The 3-d segmentations are stored as binary image masks, and are serialized into DICOM Segmentation Storage objects, which in turn can be referenced from the AIM XML document.

Release Notes

Installation: Reporting module is available as an extension that can be installed using Slicer Extension Manager. Make sure Extension Manager is enabled in the Application settings (as shown here). Follow the Extension Manager usage instructions to find and install Reporting extension. Once installed, you need to restart Slicer before you can use the Reporting module.

Potential issues related to extensions and multiple versions of Slicer: Slicer settings are stored in a dedicated system-specific location. These settings are not reset when you install a new Slicer version. If you observe unstable behavior, you could try resetting the settings as follows:

• Linux and Mac: settings are stored in your home directory in .config folder (remove ~/.config or move it to a different location)
• Windows: settings are located in C:\Users\<your_user_name>\AppData\Roaming\NA-MIC folder -- remove it or move to a different location. If you don't see this folder, it may be hidden. Try following these instructions to show it: http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7.

WARNING: the configuration file contains the path to your DICOM database. Once the configuration file is removed, you will need to re-configure the DICOM module to point it to the location of the database!

This limitation is also described on the Limitations page.

Please note that this module is under active development, and is being made available for the purposes of beta testing and feedback evaluation! The functionality, GUI and workflows may change in the subsequent releases of the module.

Use Cases

This module is designed for the use cases that require creation and/or exchange of self-containing documents describing a certain finding in a DICOM image, such as lesions and anatomical structures.

Tutorials

Not available at this time.

Panels and their use

Before you start using the module, you need to be familiar with 3D Slicer interface and main features. Please see instruction on using the main application GUI and various tutorials to learn about 3D Slicer.

Reporting module uses internal data structure called "report" to organize the markup/annotations and associate them with the image volume being annotated.

The steps to create a new report are the following:

A DICOM imaging study that will be annotated should be loaded into Slicer DICOM database using Slicer DICOM module. If you are unsure what this means, see documentation of the DICOM module. NOTE: only volumes loaded from DICOM module can be used in this module! In the Reporting module, new report should be created (see explanation of the module GUI panels below) (Input panel) The volume that will be annotated should be selected (Input panel). Following this, the slice viewers will be initialized to show the volume being annotated. The name of the structure should be selected from the Slicer terminology list by clicking the colored patch in the Annotation panel. Fiducial and ruler markup elements should be placed only in those slice viewers that correspond to the image acquisition plane. Those slice viewers will be listed in the Markup panel of the module. To place a new fiducial/ruler markup elements, corresponding controls in the Slicer toolbar should be used (see on the right). The tree view in the module Markup panel will be showing all markup elements that have been added to the active report. To attach a 3-d segmentation to the report, the segmentation image should be either loaded from file and added to Slicer scene (see instructions on how to use Data module), or a new segmentation should be created using the "Segmentation volume" drop-down. Segmentation can then be edited using the Editor panel that is available in the Reporting GUI (see Editor module documentation for using Editor tools). "Export" functionality can be used to save the report into AIM XML format, and the segmentations (if exist) as DICOM Segmentation objects into the specified location. "Import" functionality can be used to load the report back into Slicer.

Slicer toolbar buttons that should be used for placement of fiducial/ruler markups.

GUI of the module contains the following elements:

Input panel Report: active report being edited Annotated volume: volume being annotated Annotation panel contains the name of the structure being annotated and the colored patch showing the label color. Clicking the colored patch will bring up the selection of the supported named structures. Currently supported terminology is based on Slicer General Anatomy Colors lookup table. Integration of this table with standardized lexicon is under development. Markup panel contains the text listing the slice viewers that should be used for placing fiducial/ruler markups. Table view widget shows the markups that are associated with the report. The "eye" button toggles visibility of the markup element. Clicking the row with the markup aligns the slices with the location of the markup. Segmentation panel Segmentation volume selector allows to choose the volume containing the segmentation, or to create a new segmentation. For an existing label map (segmentation) to be associated with the active report, the geometry of the image volume containing the segmentation should match the geometry of the annotated volume. New segmentation volume can be created to match the geometry of the active volume using the segmentation selector. Once the label volume is selected/created, it can be edited using the Editor tools: these are available by expanding the "Edit Selected Label Map" panel (see figure on the right). Import/Export panel allow to export/import the report into AIM format. DICOM Segmentation objects that are imported to the user-defined location on disk are also automatically inserted into the local DICOM database. They can be loaded back into Slicer as segmentation labels independently of the report using DICOM module.

Module GUI New label volume can be created using the "Segmentation volume" selector Segmentation can be edited using Editor module tools provided in the "Edit selected label map" panel.

Mapping from SlicerGenericAnatomyColors LUT and DICOM SEG Segmented Property

Currently, only labels that use GeneralAnatomy LUT are supported and can be converted to and from DICOM SEG format. The original LUT is available here: http://www.slicer.org/wiki/Documentation/4.1/SlicerApplication/LookupTables/GenericAnatomyColors. The table below was compiled by David Clunie, Andrey Fedorov and Neha Agrawal to map most of the colors of the LUT to Segmented Property Category, Type and Modifier (when appropriate), which are required for encoding label segments in DICOM SEG.

Licensing and redistribution: per agreement between SNOMED and DICOM, "the agreement with SNOMED is to allow any implementer to use the terms included in DICOM in their implementations and products without fee". These codes have been incorporated into the DICOM standard: ftp://medical.nema.org/medical/dicom/final/cp1258_ft2.pdf, contains the items included in this table.

integer_label	text_label	color	SegmentedPropertyCategory	SegmentedPropertyType	SegmentedPropertyModifier
1	tissue	rgb(128,174,128)	(T-D0050;SRT;Tissue)	(T-D0050;SRT;Tissue)
2	bone	rgb(241,214,145)	(T-D0050;SRT;Tissue)	(T-D016E;SRT;Bone)
3	skin	rgb(177,122,101)	(T-D0050;SRT;Tissue)	(T-01000;SRT;Skin)
4	connective tissue	rgb(111,184,210)	(T-D0050;SRT;Tissue)	(T-1A200;SRT;Connective Tissue)
5	blood	rgb(216,101,79)	(T-D0080;SRT;Body Substance)	(T-C2000;SRT;Blood)
6	organ	rgb(221,130,101)	(T-D0050;SRT;Tissue)	(T-1A310;SRT;Organ)
7	mass	rgb(144,238,144)	(M-01000;SRT;Morphologically Altered Structure)	(M-03000;SRT;Mass)
8	muscle	rgb(192,104,88)	(T-D0050;SRT;Tissue)	(T-13001;SRT;Muscle)
9	foreign object	rgb(220,245,20)	(A-00004;SRT;Physical Object)	(M-30400;SRT;Foreign Body)
10	waste	rgb(78,63,0)	(A-00004;SRT;Physical Object)	(F-61779;SRT;Waste Material)
11	teeth	rgb(255,250,220)	(T-D000A;SRT;Anatomical Structure)	(T-5401E;SRT;Tooth)
12	fat	rgb(230,220,70)	(T-D0050;SRT;Tissue)	(F-03D38;SRT;Body Fat)
13	gray matter	rgb(200,200,235)	(T-D0050;SRT;Tissue)	(T-A0096;SRT;Gray Matter)
14	white matter	rgb(250,250,210)	(T-D0050;SRT;Tissue)	(T-A0095;SRT;White Matter)
15	nerve	rgb(244,214,49)	(T-D0050;SRT;Tissue)	(T-D0598;SRT;Nerve)
16	vein	rgb(0,151,206)	(T-D0050;SRT;Tissue)	(T-4806E;SRT;Vein)
17	artery	rgb(216,101,79)	(T-D0050;SRT;Tissue)	(T-41066;SRT;Artery)
18	capillary	rgb(183,156,220)	(T-D0050;SRT;Tissue)	(T-40050;SRT;Capillary)
19	ligament	rgb(183,214,211)	(T-D0050;SRT;Tissue)	(T-18010;SRT;Ligament)
20	tendon	rgb(152,189,207)	(T-D0050;SRT;Tissue)	(T-17010;SRT;Tendon)
21	cartilage	rgb(111,184,210)	(T-D0050;SRT;Tissue)	(T-D021B;SRT;Cartilage)
22	meniscus	rgb(178,212,242)	(T-D0050;SRT;Tissue)	(T-15009;SRT;Meniscus)
23	lymph node	rgb(68,172,100)	(T-D0050;SRT;Tissue)	(T-C4000;SRT;Lymph Node)
24	lymphatic vessel	rgb(111,197,131)	(T-D0050;SRT;Tissue)	(T-C6010;SRT;Lymphatic Vessel)
25	cerebro-spinal fluid	rgb(85,188,255)	(T-D0080;SRT;Body Substance)	(T-A1000;SRT;Cerebrospinal Fluid)
26	bile	rgb(0,145,30)	(T-D0080;SRT;Body Substance)	(T-60650;SRT;Bile)
27	urine	rgb(214,230,130)	(T-D0080;SRT;Body Substance)	(T-70060;SRT;Urine)
28	feces	rgb(78,63,0)	(T-D0080;SRT;Body Substance)	(T-59666;SRT;Feces)
29	gas	rgb(218,255,255)	(T-D0080;SRT;Body Substance)	(C-10080;SRT;Gas)
30	fluid	rgb(170,250,250)	(T-D0080;SRT;Body Substance)	(T-D0070;SRT;Body Fluid)
31	edema	rgb(140,224,228)	(M-01000;SRT;Morphologically Altered Structure)	(M-36300;SRT;Edema)
32	bleeding	rgb(188,65,28)	(M-01000;SRT;Morphologically Altered Structure)	(M-37000;SRT;Hemorrhage)
33	necrosis	rgb(216,191,216)	(M-01000;SRT;Morphologically Altered Structure)	(M-54000;SRT;Necrosis)
34	clot	rgb(145,60,66)	(M-01000;SRT;Morphologically Altered Structure)	(M-35000;SRT;Blood Clot)
35	embolism	rgb(150,98,83)	(M-01000;SRT;Morphologically Altered Structure)	(M-35300;SRT;Embolus)
36	head	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D1105;SRT;Head)
37	central nervous system	rgb(244,214,49)	(T-D000A;SRT;Anatomical Structure)	(T-A0091;SRT;Central Nervous System)
38	brain	rgb(250,250,225)	(T-D000A;SRT;Anatomical Structure)	(T-A0100;SRT;Brain)
39	gray matter of brain	rgb(200,200,215)	(T-D0050;SRT;Tissue)	(T-A2020;SRT;Cerebral Gray Matter)
40	telencephalon	rgb(68,131,98)	(T-D000A;SRT;Anatomical Structure)	(T-A010E;SRT;Telencephalon)
41	cerebral cortex	rgb(128,174,128)	(T-D000A;SRT;Anatomical Structure)	(T-A2021;SRT;Cerebral Cortex)
42	right frontal lobe	rgb(83,146,164)	(T-D000A;SRT;Anatomical Structure)	(T-A2218;SRT;Frontal Lobe)	(G-A100;SRT;Right)
43	left frontal lobe	rgb(83,146,164)	(T-D000A;SRT;Anatomical Structure)	(T-A2218;SRT;Frontal Lobe)	(G-A101;SRT;Left)
44	right temporal lobe	rgb(162,115,105)	(T-D000A;SRT;Anatomical Structure)	(T-A2513;SRT;Temporal Lobe)	(G-A100;SRT;Right)
45	left temporal lobe	rgb(162,115,105)	(T-D000A;SRT;Anatomical Structure)	(T-A2513;SRT;Temporal Lobe)	(G-A101;SRT;Left)
46	right parietal lobe	rgb(141,93,137)	(T-D000A;SRT;Anatomical Structure)	(T-A230F;SRT;Parietal Lobe)	(G-A100;SRT;Right)
47	left parietal lobe	rgb(141,93,137)	(T-D000A;SRT;Anatomical Structure)	(T-A230F;SRT;Parietal Lobe)	(G-A101;SRT;Left)
48	right occipital lobe	rgb(182,166,110)	(T-D000A;SRT;Anatomical Structure)	(T-A240F;SRT;Occipital Lobe)	(G-A100;SRT;Right)
49	left occipital lobe	rgb(182,166,110)	(T-D000A;SRT;Anatomical Structure)	(T-A240F;SRT;Occipital Lobe)	(G-A101;SRT;Left)
50	right insular lobe	rgb(188,135,166)	(T-D000A;SRT;Anatomical Structure)	(T-A2615;SRT;Insula)	(G-A100;SRT;Right)
51	left insular lobe	rgb(188,135,166)	(T-D000A;SRT;Anatomical Structure)	(T-A2615;SRT;Insula)	(G-A101;SRT;Left)
52	right limbic lobe	rgb(154,150,201)	(T-D000A;SRT;Anatomical Structure)	(T-A0036;SRT;Limbic Lobe)	(G-A100;SRT;Right)
53	left limbic lobe	rgb(154,150,201)	(T-D000A;SRT;Anatomical Structure)	(T-A0036;SRT;Limbic Lobe)	(G-A101;SRT;Left)
54	right striatum	rgb(177,140,190)	(T-D000A;SRT;Anatomical Structure)	(T-A3101;SRT;Corpus Striatum)	(G-A100;SRT;Right)
55	left striatum	rgb(177,140,190)	(T-D000A;SRT;Anatomical Structure)	(T-A3101;SRT;Corpus Striatum)	(G-A101;SRT;Left)
56	right caudate nucleus	rgb(30,111,85)	(T-D000A;SRT;Anatomical Structure)	(T-A3201;SRT;Caudate Nucleus)	(G-A100;SRT;Right)
57	left caudate nucleus	rgb(30,111,85)	(T-D000A;SRT;Anatomical Structure)	(T-A3201;SRT;Caudate Nucleus)	(G-A101;SRT;Left)
58	right putamen	rgb(210,157,166)	(T-D000A;SRT;Anatomical Structure)	(T-A3401;SRT;Putamen)	(G-A100;SRT;Right)
59	left putamen	rgb(210,157,166)	(T-D000A;SRT;Anatomical Structure)	(T-A3401;SRT;Putamen)	(G-A101;SRT;Left)
60	right pallidum	rgb(48,129,126)	(T-D000A;SRT;Anatomical Structure)	(T-A3503;SRT;Globus Pallidus)	(G-A100;SRT;Right)
61	left pallidum	rgb(48,129,126)	(T-D000A;SRT;Anatomical Structure)	(T-A3503;SRT;Globus Pallidus)	(G-A101;SRT;Left)
62	right amygdaloid complex	rgb(98,153,112)	(T-D000A;SRT;Anatomical Structure)	(T-A3231;SRT;Amygdaloid Nucleus)	(G-A100;SRT;Right)
63	left amygdaloid complex	rgb(98,153,112)	(T-D000A;SRT;Anatomical Structure)	(T-A3231;SRT;Amygdaloid Nucleus)	(G-A101;SRT;Left)
64	diencephalon	rgb(69,110,53)	(T-D000A;SRT;Anatomical Structure)	(T-A0107;SRT;Diencephalon)	(G-A100;SRT;Right)
65	thalamus	rgb(166,113,137)	(T-D000A;SRT;Anatomical Structure)	(T-A4001;SRT;Nucleus of Thalamus)	(G-A101;SRT;Left)
66	right thalamus	rgb(122,101,38)	(T-D000A;SRT;Anatomical Structure)	(T-A4001;SRT;Nucleus of Thalamus)	(G-A100;SRT;Right)
67	left thalamus	rgb(122,101,38)	(T-D000A;SRT;Anatomical Structure)	(T-A4001;SRT;Nucleus of Thalamus)	(G-A101;SRT;Left)
68	pineal gland	rgb(253,135,192)	(T-D000A;SRT;Anatomical Structure)	(T-B2003;SRT;Pineal Gland)
69	midbrain	rgb(145,92,109)	(T-D000A;SRT;Anatomical Structure)	(T-A510A;SRT;Midbrain)
70	substantia nigra	rgb(46,101,131)	(T-D000A;SRT;Anatomical Structure)	(T-A5163;SRT;Substantia Nigra)
71	right substantia nigra	rgb(0,108,112)	(T-D000A;SRT;Anatomical Structure)	(T-A5163;SRT;Substantia Nigra)	(G-A100;SRT;Right)
72	left substantia nigra	rgb(0,108,112)	(T-D000A;SRT;Anatomical Structure)	(T-A5163;SRT;Substantia Nigra)	(G-A101;SRT;Left)
73	cerebral white matter	rgb(250,250,225)	(T-D000A;SRT;Anatomical Structure)	(T-A2032;SRT;Cerebral White Matter)
74	right superior longitudinal fasciculus	rgb(127,150,88)	(T-D000A;SRT;Anatomical Structure)	(T-A2820;SRT;Superior Longitudinal Fasciculus)	(G-A100;SRT;Right)
75	left superior longitudinal fasciculus	rgb(127,150,88)	(T-D000A;SRT;Anatomical Structure)	(T-A2820;SRT;Superior Longitudinal Fasciculus)	(G-A101;SRT;Left)
76	right inferior longitudinal fasciculus	rgb(159,116,163)	(T-D000A;SRT;Anatomical Structure)	(T-A2851;SRT;Inferior Longitudinal Fasciculus)	(G-A100;SRT;Right)
77	left inferior longitudinal fasciculus	rgb(159,116,163)	(T-D000A;SRT;Anatomical Structure)	(T-A2851;SRT;Inferior Longitudinal Fasciculus)	(G-A101;SRT;Left)
78	right arcuate fasciculus	rgb(125,102,154)	(T-D000A;SRT;Anatomical Structure)	(276650;FMA;Arcuate Fasciculus)	(G-A100;SRT;Right)
79	left arcuate fasciculus	rgb(125,102,154)	(T-D000A;SRT;Anatomical Structure)	(276650;FMA;Arcuate Fasciculus)	(G-A101;SRT;Left)
80	right uncinate fasciculus	rgb(106,174,155)	(T-D000A;SRT;Anatomical Structure)	(T-A2831;SRT;Uncinate Fasciculus)	(G-A100;SRT;Right)
81	left uncinate fasciculus	rgb(106,174,155)	(T-D000A;SRT;Anatomical Structure)	(T-A2831;SRT;Uncinate Fasciculus)	(G-A101;SRT;Left)
82	right cingulum bundle	rgb(154,146,83)	(T-D000A;SRT;Anatomical Structure)	(T-A2841;SRT;Cingulum)	(G-A100;SRT;Right)
83	left cingulum bundle	rgb(154,146,83)	(T-D000A;SRT;Anatomical Structure)	(T-A2841;SRT;Cingulum)	(G-A101;SRT;Left)
85	right corticospinal tract	rgb(201,160,133)	(T-D000A;SRT;Anatomical Structure)	(T-A709C;SRT;Lateral Corticospinal Tract)	(G-A100;SRT;Right)
86	left corticospinal tract	rgb(201,160,133)	(T-D000A;SRT;Anatomical Structure)	(T-A709C;SRT;Lateral Corticospinal Tract)	(G-A101;SRT;Left)
87	right optic radiation	rgb(78,152,141)	(T-D000A;SRT;Anatomical Structure)	(T-A2881;SRT;Optic Radiation)	(G-A100;SRT;Right)
88	left optic radiation	rgb(78,152,141)	(T-D000A;SRT;Anatomical Structure)	(T-A2881;SRT;Optic Radiation)	(G-A101;SRT;Left)
89	right medial lemniscus	rgb(174,140,103)	(T-D000A;SRT;Anatomical Structure)	(T-A5273; SRT;Medial Lemniscus)	(G-A100;SRT;Right)
90	left medial lemniscus	rgb(174,140,103)	(T-D000A;SRT;Anatomical Structure)	(T-A5273; SRT;Medial Lemniscus)	(G-A101;SRT;Left)
91	right superior cerebellar peduncle	rgb(139,126,177)	(T-D000A;SRT;Anatomical Structure)	(T-A6621; SRT; superior cerebellar peduncle)	(G-A100;SRT;Right)
92	left superior cerebellar peduncle	rgb(139,126,177)	(T-D000A;SRT;Anatomical Structure)	(T-A6621; SRT; superior cerebellar peduncle)	(G-A101;SRT;Left)
93	right middle cerebellar peduncle	rgb(148,120,72)	(T-D000A;SRT;Anatomical Structure)	(T-A6631;SRT;middle cerebellar peduncle)	(G-A100;SRT;Right)
94	left middle cerebellar peduncle	rgb(148,120,72)	(T-D000A;SRT;Anatomical Structure)	(T-A6631;SRT;middle cerebellar peduncle)	(G-A101;SRT;Left)
95	right inferior cerebellar peduncle	rgb(186,135,135)	(T-D000A;SRT;Anatomical Structure)	(T-A6641;SRT;inferior cerebellar peduncle )	(G-A100;SRT;Right)
96	left inferior cerebellar peduncle	rgb(186,135,135)	(T-D000A;SRT;Anatomical Structure)	(T-A6641;SRT;inferior cerebellar peduncle )	(G-A101;SRT;Left)
97	optic chiasm	rgb(99,106,24)	(T-D000A;SRT;Anatomical Structure)	(T-A800B;SRT;Optic Chiasm)
98	right optic tract	rgb(156,171,108)	(T-D000A;SRT;Anatomical Structure)	(T-A807B1;SRT;optic tract)	(G-A100;SRT;Right)
99	left optic tract	rgb(156,171,108)	(T-D000A;SRT;Anatomical Structure)	(T-A807B1;SRT;optic tract)	(G-A101;SRT;Left)
100	right fornix	rgb(64,123,147)	(T-D000A;SRT;Anatomical Structure)	(T-A2978;SRT;cerebral fornix)	(G-A100;SRT;Right)
101	left fornix	rgb(64,123,147)	(T-D000A;SRT;Anatomical Structure)	(T-A2978;SRT;cerebral fornix)	(G-A101;SRT;Left)
103	corpus callosum	rgb(97,113,158)	(T-D000A;SRT;Anatomical Structure)	(T-A2701;SRT;corpus callosum
104	posterior commissure	rgb(126,161,197)	(T-D000A;SRT;Anatomical Structure)	(T-A4904;SRT;Posterior Cerebral Commissure)
105	cerebellar white matter	rgb(194,195,164)	(T-D000A;SRT;Anatomical Structure)	(T-A6080;SRT;Cerebellar White Matter)
106	CSF space	rgb(85,188,255)	(T-D000A;SRT;Anatomical Structure)	(T-A0109;SRT;Brain Cerebrospinal Fluid Pathway)
107	ventricles of brain	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1603;SRT;Ventricle of Brain)
108	right lateral ventricle	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1651;SRT;lateral ventricle)	(G-A100;SRT;Right)
109	left lateral ventricle	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1651;SRT;lateral ventricle)	(G-A101;SRT;Left)
110	right third ventricle	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1741;SRT;third ventricle)	(G-A100;SRT;Right)
111	left third ventricle	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1741;SRT;third ventricle)	(G-A101;SRT;Left)
112	cerebral aqueduct	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A0106;SRT;cerebral aqueduct)
113	fourth ventricle	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1821;SRT;fourth ventricle)
114	subarachnoid space	rgb(88,106,215)	(T-D000A;SRT;Anatomical Structure)	(T-A1503;SRT;subarachnoid space)
115	spinal cord	rgb(244,214,49)	(T-D000A;SRT;Anatomical Structure)	(T-A7013;SRT;spinal cord)
116	gray matter of spinal cord	rgb(200,200,215)	(T-D000A;SRT;Anatomical Structure)	(T-A7020;SRT;Spinal Cord Gray Matter)
117	white matter of spinal cord	rgb(250,250,225)	(T-D000A;SRT;Anatomical Structure)	(T-A7070;SRT;Spinal Cord White Matter)
119	pituitary gland	rgb(57,157,110)	(T-D000A;SRT;Anatomical Structure)	(T-B0007;SRT;pituitary gland)
120	adenohypophysis	rgb(60,143,83)	(T-D000A;SRT;Anatomical Structure)	(T-B1101;SRT;adenohypophysis)
121	neurohypophysis	rgb(92,162,109)	(T-D000A;SRT;Anatomical Structure)	(T-B1201;SRT;neurohypophysis)
122	meninges	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-A1110;SRT;Meninges)
123	dura mater	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-A1121;SRT;dura mater
124	arachnoid	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-A1223;SRT;arachnoid)
125	pia mater	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-A1283;SRT.pia mater)
126	muscles of head	rgb(201,121,77)	(T-D000A;SRT;Anatomical Structure)	(T-13103;SRT;Entire skeletal muscle of head)
127	salivary glands	rgb(70,163,117)	(T-D000A;SRT;Anatomical Structure)	(T-61004;SRT;salivary gland)
128	lips	rgb(188,91,95)	(T-D000A;SRT;Anatomical Structure)	(T-52004;SRT;lip)
129	nose	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-21003;SRT;nose)
130	tongue	rgb(166,84,94)	(T-D000A;SRT;Anatomical Structure)	(T-5300D;SRT;tongue)
131	soft palate	rgb(182,105,107)	(T-D000A;SRT;Anatomical Structure)	(T-51127;SRT;soft palate)
132	right inner ear	rgb(229,147,118)	(T-D000A;SRT;Anatomical Structure)	(T-AB707;SRT;inner ear )	(G-A100;SRT;Right)
133	left inner ear	rgb(229,147,118)	(T-D000A;SRT;Anatomical Structure)	(T-AB707;SRT;inner ear )	(G-A101;SRT;Left)
134	right external ear	rgb(174,122,90)	(T-D000A;SRT;Anatomical Structure)	(T-AB10B;SRT;external ear )	(G-A100;SRT;Right)
135	left external ear	rgb(174,122,90)	(T-D000A;SRT;Anatomical Structure)	(T-AB10B;SRT;external ear )	(G-A101;SRT;Left)
136	right middle ear	rgb(201,112,73)	(T-D000A;SRT;Anatomical Structure)	(T-AB306;SRT;middle ear)	(G-A100;SRT;Right)
137	left middle ear	rgb(201,112,73)	(T-D000A;SRT;Anatomical Structure)	(T-AB306;SRT;middle ear)	(G-A101;SRT;Left)
138	right eyeball	rgb(194,142,0)	(T-D000A;SRT;Anatomical Structure)	(T-AA636;SRT;Fundus of Eye)	(G-A100;SRT;Right)
139	left eyeball	rgb(194,142,0)	(T-D000A;SRT;Anatomical Structure)	(T-AA636;SRT;Fundus of Eye)	(G-A101;SRT;Left)
140	skull	rgb(241,213,144)	(T-D000A;SRT;Anatomical Structure)	(T-11100;SRT;Skull)
141	right frontal bone	rgb(203,179,77)	(T-D000A;SRT;Anatomical Structure)	(T-111C6;SRT;frontal bone)	(G-A100;SRT;Right)
142	left frontal bone	rgb(203,179,77)	(T-D000A;SRT;Anatomical Structure)	(T-111C6;SRT;frontal bone)	(G-A101;SRT;Left)
143	right parietal bone	rgb(229,204,109)	(T-D000A;SRT;Anatomical Structure)	(T-111C7;SRT;parietal bone )	(G-A100;SRT;Right)
144	left parietal bone	rgb(229,204,109)	(T-D000A;SRT;Anatomical Structure)	(T-111C7;SRT;parietal bone )	(G-A101;SRT;Left)
145	right temporal bone	rgb(255,243,152)	(T-D000A;SRT;Anatomical Structure)	(T-111C8;SRT;temporal bone)	(G-A100;SRT;Right)
146	left temporal bone	rgb(255,243,152)	(T-D000A;SRT;Anatomical Structure)	(T-111C8;SRT;temporal bone)	(G-A101;SRT;Left)
147	right sphenoid bone	rgb(209,185,85)	(T-D000A;SRT;Anatomical Structure)	(T-111B9;SRT;sphenoid bone)	(G-A100;SRT;Right)
148	left sphenoid bone	rgb(209,185,85)	(T-D000A;SRT;Anatomical Structure)	(T-111B9;SRT;sphenoid bone)	(G-A101;SRT;Left)
149	right ethmoid bone	rgb(248,223,131)	(T-D000A;SRT;Anatomical Structure)	(T-111B7;SRT;ethmoid bone)	(G-A100;SRT;Right)
150	left ethmoid bone	rgb(248,223,131)	(T-D000A;SRT;Anatomical Structure)	(T-111B7;SRT;ethmoid bone)	(G-A101;SRT;Left)
151	occipital bone	rgb(255,230,138)	(T-D000A;SRT;Anatomical Structure)	(T-111C9;SRT;occipital bone )
152	maxilla	rgb(196,172,68)	(T-D000A;SRT;Anatomical Structure)	(T-111D4;SRT;maxilla)
153	right zygomatic bone	rgb(255,255,167)	(T-D000A;SRT;Anatomical Structure)	(T-111BE;SRT;zygoma)	(G-A100;SRT;Right)
154	right lacrimal bone	rgb(255,250,160)	(T-D000A;SRT;Anatomical Structure)	(T-111B8;SRT;lacrimal bone)	(G-A100;SRT;Right)
155	vomer bone	rgb(255,237,145)	(T-D000A;SRT;Anatomical Structure)	(T-21349;SRT;vomer bone)
156	right palatine bone	rgb(242,217,123)	(T-D000A;SRT;Anatomical Structure)	(T-111A8;SRT;palatine bone)	(G-A100;SRT;Right)
157	left palatine bone	rgb(242,217,123)	(T-D000A;SRT;Anatomical Structure)	(T-111A8;SRT;palatine bone)	(G-A101;SRT;Left)
158	mandible	rgb(222,198,101)	(T-D000A;SRT;Anatomical Structure)	(T-111D3;SRT;mandible )
159	neck	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D1607;SRT.neck )
160	muscles of neck	rgb(213,124,109)	(T-D000A;SRT;Anatomical Structure)	(T-13311;SRT;skeletal muscle of neck)
161	pharynx	rgb(184,105,108)	(T-D000A;SRT;Anatomical Structure)	(T-55002;SRT;pharynx )
162	larynx	rgb(150,208,243)	(T-D000A;SRT;Anatomical Structure)	(T-2410C;SRT;larynx)
163	thyroid gland	rgb(62,162,114)	(T-D000A;SRT;Anatomical Structure)	(T-B0004;SRT;thyroid gland )
164	right parathyroid glands	rgb(62,162,114)	(T-D000A;SRT;Anatomical Structure)	(T-B0006;SRT;parathyroid gland )	(G-A100;SRT;Right)
165	left parathyroid glands	rgb(62,162,114)	(T-D000A;SRT;Anatomical Structure)	(T-B0006;SRT;parathyroid gland )	(G-A101;SRT;Left)
166	skeleton of neck	rgb(242,206,142)	(T-D000A;SRT;Anatomical Structure)	(T-D006D;SRT;bone structure of head and/or neck)
167	hyoid bone	rgb(250,210,139)	(T-D000A;SRT;Anatomical Structure)	(T-111BF;SRT;hyoid bone)
168	cervical vertebral column	rgb(255,255,207)	(T-D000A;SRT;Anatomical Structure)	(T-116E0;SRT;Entire cervical vertebra)
169	thorax	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D3003;SRT;thorax)
170	trachea	rgb(182,228,255)	(T-D000A;SRT;Anatomical Structure)	(T-2500A;SRT;trachea)
171	bronchi	rgb(175,216,244)	(T-D000A;SRT;Anatomical Structure)	(T-26000;SRT;Bronchi)
172	right lung	rgb(197,165,145)	(T-D000A;SRT;Anatomical Structure)	(T-28000;SRT;Lung)	(G-A100;SRT;Right)
173	left lung	rgb(197,165,145)	(T-D000A;SRT;Anatomical Structure)	(T-28000;SRT;Lung)	(G-A101;SRT;Left)
174	superior lobe of right lung	rgb(172,138,115)	(T-D000A;SRT;Anatomical Structure)	(T-28821;SRT;Upper Lobe of Lung)	(G-A100;SRT;Right)
175	superior lobe of left lung	rgb(172,138,115)	(T-D000A;SRT;Anatomical Structure)	(T-28821;SRT;Upper Lobe of Lung)	(G-A101;SRT;Left)
176	middle lobe of right lung	rgb(202,164,140)	(T-D000A;SRT;Anatomical Structure)	(T-28301;SRT;MIddle Lobe of Right Lung)
177	inferior lobe of right lung	rgb(224,186,162)	(T-D000A;SRT;Anatomical Structure)	(T-28831;SRT;Lower Lobe of Lung)	(G-A100;SRT;Right)
178	inferior lobe of left lung	rgb(224,186,162)	(T-D000A;SRT;Anatomical Structure)	(T-28831;SRT;Lower Lobe of Lung)	(G-A101;SRT;Left)
179	pleura	rgb(255,245,217)	(T-D000A;SRT;Anatomical Structure)	(T-29001;SRT;pleura)
180	heart	rgb(206,110,84)	(T-D000A;SRT;Anatomical Structure)	(T-32000;SRT;Heart)
181	right atrium	rgb(210,115,89)	(T-D000A;SRT;Anatomical Structure)	(T-32101;SRT;atrium)
182	left atrium	rgb(203,108,81)	(T-D000A;SRT;Anatomical Structure)	(T-32101;SRT;atrium)
183	atrial septum	rgb(233,138,112)	(T-D000A;SRT;Anatomical Structure)	(T-32158;SRTinteratrial septum)
184	ventricular septum	rgb(195,100,73)	(T-D000A;SRT;Anatomical Structure)	(T-3241C;SRT;interventricular septum)
185	right ventricle of heart	rgb(181,85,57)	(T-D000A;SRT;Anatomical Structure)	(T-32500;SRT;Right Ventricle)
186	left ventricle of heart	rgb(152,55,13)	(T-D000A;SRT;Anatomical Structure)	(T-32600;SRT;Left Ventricle)
187	mitral valve	rgb(159,63,27)	(T-D000A;SRT;Anatomical Structure)	(T-35301;SRT;mitral valve)
188	tricuspid valve	rgb(166,70,38)	(T-D000A;SRT;Anatomical Structure)	(T-35102;SRT;tricuspid valve)
189	aortic valve	rgb(218,123,97)	(T-D000A;SRT;Anatomical Structure)	(T-35401;SRT;aortic valve
190	pulmonary valve	rgb(225,130,104)	(T-D000A;SRT;Anatomical Structure)	(T-35201;SRT;pulmonary valve)
191	aorta	rgb(224,97,76)	(T-D000A;SRT;Anatomical Structure)	(T-42000;SRT;Aorta)
192	pericardium	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-39004;SRT;pericardium)
193	pericardial cavity	rgb(184,122,154)	(T-D000A;SRT;Anatomical Structure)	(T-39051;SRT;pericardial cavity)
194	esophagus	rgb(211,171,143)	(T-D000A;SRT;Anatomical Structure)	(T-56000;SRT;Esophagus)
195	thymus	rgb(47,150,103)	(T-D000A;SRT;Anatomical Structure)	(T-C8000;SRT;Thymus Gland)
196	mediastinum	rgb(255,244,209)	(T-D000A;SRT;Anatomical Structure)	(T-D3300;SRT;Mediastinum)
197	skin of thoracic wall	rgb(173,121,88)	(T-D000A;SRT;Anatomical Structure)	(T-0243C;SRT;skin of chest)
198	muscles of thoracic wall	rgb(188,95,76)	(T-D000A;SRT;Anatomical Structure)	(T-14104;SRT;skeletal muscle of thorax)
199	skeleton of thorax	rgb(255,239,172)	(T-D000A;SRT;Anatomical Structure)	(T-110E9;SRT;bone organ of thorax)
200	thoracic vertebral column	rgb(226,202,134)	(T-D000A;SRT;Anatomical Structure)	(T-1171F;SRT;thoracic vertebral column)
201	ribs	rgb(253,232,158)	(T-D000A;SRT;Anatomical Structure)	(T-11300;SRT;Rib)
202	sternum	rgb(244,217,154)	(T-D000A;SRT;Anatomical Structure)	(T-11210;SRT;Sternum)
203	right clavicle	rgb(205,179,108)	(T-D000A;SRT;Anatomical Structure)	(T-12310;SRT;Clavicle)	(G-A100;SRT;Right)
204	left clavicle	rgb(205,179,108)	(T-D000A;SRT;Anatomical Structure)	(T-12310;SRT;Clavicle)	(G-A101;SRT;Left)
205	abdominal cavity	rgb(186,124,161)	(T-D000A;SRT;Anatomical Structure)	(T-D401A;SRT;abdominal cavity)
206	abdomen	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D4000;SRT;Abdomen)
207	peritoneum	rgb(255,255,220)	(T-D000A;SRT;Anatomical Structure)	(T-D4403;SRT;peritoneum)
208	omentum	rgb(234,234,194)	(T-D000A;SRT;Anatomical Structure)	(T-D4601;SRT;omentum)
209	peritoneal cavity	rgb(204,142,178)	(T-D000A;SRT;Anatomical Structure)	(T-D4447;SRT;peritoneal cavity)
210	retroperitoneal space	rgb(180,119,153)	(T-D000A;SRT;Anatomical Structure)	(T-D4902;SRT;retroperitoneal space)
211	stomach	rgb(216,132,105)	(T-D000A;SRT;Anatomical Structure)	(T-57001;SRT;stomach)
212	duodenum	rgb(255,253,229)	(T-D000A;SRT;Anatomical Structure)	(T-58206;SRT;duodenum)
213	small bowel	rgb(205,167,142)	(T-D000A;SRT;Anatomical Structure)	(T-D4033;SRT;Small Intestine)
214	colon	rgb(204,168,143)	(T-D000A;SRT;Anatomical Structure)	(T-59302;SRT;Colon)
215	anus	rgb(255,224,199)	(T-D000A;SRT;Anatomical Structure)	(T-59902;SRT;Anus)
216	liver	rgb(221,130,101)	(T-D000A;SRT;Anatomical Structure)	(T-62000;SRT;Liver)
217	biliary tree	rgb(0,145,30)	(T-D000A;SRT;Anatomical Structure)	(T-60613;SRT;Bile Duct)
218	gallbladder	rgb(139,150,98)	(T-D000A;SRT;Anatomical Structure)	(T-63002;SRT;gallbladder)
219	pancreas	rgb(249,180,111)	(T-D000A;SRT;Anatomical Structure)	(T-D4034;SRT;pancreas)
220	spleen	rgb(157,108,162)	(T-D000A;SRT;Anatomical Structure)	(T-C3000;SRT;Spleen)
221	urinary system	rgb(203,136,116)	(T-D000A;SRT;Anatomical Structure)	(T-70002;SRT;urinary system)
222	right kidney	rgb(185,102,83)	(T-D000A;SRT;Anatomical Structure)	(T-71000;SRT;Kidney)	(G-A100;SRT;Right)
223	left kidney	rgb(185,102,83)	(T-D000A;SRT;Anatomical Structure)	(T-71000;SRT;Kidney)	(G-A101;SRT;Left)
224	right ureter	rgb(247,182,164)	(T-D000A;SRT;Anatomical Structure)	(T-73005;SRT;ureter)
225	left ureter	rgb(247,182,164)	(T-D000A;SRT;Anatomical Structure)	(T-73005;SRT;ureter)
226	urinary bladder	rgb(222,154,132)	(T-D000A;SRT;Anatomical Structure)	(T-74000;SRT;Bladder)
227	urethra	rgb(124,186,223)	(T-D000A;SRT;Anatomical Structure)	(T-75001;SRT;urethra )
228	right adrenal gland	rgb(249,186,150)	(T-D000A;SRT;Anatomical Structure)	(T-B3000;SRT;Adrenal Gland)	(G-A100;SRT;Right)
229	left adrenal gland	rgb(249,186,150)	(T-D000A;SRT;Anatomical Structure)	(T-B3000;SRT;Adrenal Gland)	(G-A101;SRT;Left)
230	female internal genitalia	rgb(244,170,147)	(T-D000A;SRT;Anatomical Structure)	(T-80021;SRT;female internal genitalia)
231	uterus	rgb(255,181,158)	(T-D000A;SRT;Anatomical Structure)	(T-83000;SRT;Uterus)
232	right fallopian tube	rgb(255,190,165)	(T-D000A;SRT;Anatomical Structure)	(T-D6101;SRT;fallopian tube)
233	left fallopian tube	rgb(227,153,130)	(T-D000A;SRT;Anatomical Structure)	(T-D6101;SRT;fallopian tube)
234	right ovary	rgb(213,141,113)	(T-D000A;SRT;Anatomical Structure)	(T-87000;SRT;Ovary)	(G-A100;SRT;Right)
235	left ovary	rgb(213,141,113)	(T-D000A;SRT;Anatomical Structure)	(T-87000;SRT;Ovary)	(G-A101;SRT;Left)
236	vagina	rgb(193,123,103)	(T-D000A;SRT;Anatomical Structure)	(T-82003;SRT;vagina)
237	male internal genitalia	rgb(216,146,127)	(T-D000A;SRT;Anatomical Structure)	(T-90021;SRT;male internal genitalia)
238	prostate	rgb(230,158,140)	(T-D000A;SRT;Anatomical Structure)	(T-92000;SRT;Prostate)
239	right seminal vesicle	rgb(245,172,147)	(T-D000A;SRT;Anatomical Structure)	(T-93000;SRT;Seminal Vesicle)	(G-A100;SRT;Right)
240	left seminal vesicle	rgb(245,172,147)	(T-D000A;SRT;Anatomical Structure)	(T-93000;SRT;Seminal Vesicle)	(G-A101;SRT;Left)
241	right deferent duct	rgb(241,172,151)	(T-D000A;SRT;Anatomical Structure)	(T-96004;SRT;Vas Deferens)	(G-A100;SRT;Right)
242	left deferent duct	rgb(241,172,151)	(T-D000A;SRT;Anatomical Structure)	(T-96004;SRT;Vas Deferens)	(G-A101;SRT;Left)
243	skin of abdominal wall	rgb(177,124,92)	(T-D000A;SRT;Anatomical Structure)	(T-02489;SRT;Entire skin of abdomen)
244	muscles of abdominal wall	rgb(171,85,68)	(T-D000A;SRT;Anatomical Structure)	(T-14205;SRT;Entire abdominal wall muscle)
246	lumbar vertebral column	rgb(212,188,102)	(T-D000A;SRT;Anatomical Structure)	(T-1190E;SRT;lumbar vertebral column
247	female external genitalia	rgb(185,135,134)	(T-D000A;SRT;Anatomical Structure)	(T-80011;SRT;female external genitalia)
248	male external genitalia	rgb(185,135,134)	(T-D000A;SRT;Anatomical Structure)	(T-90012;SRT;Entire male external genitalia )
249	skeleton of upper limb	rgb(198,175,125)	(T-D000A;SRT;Anatomical Structure)	(T-124A6;SRT;Entire bone of upper extremity)
250	muscles of upper limb	rgb(194,98,79)	(T-D000A;SRT;Anatomical Structure)	(T-1360E;SRT;Entire skeletal muscle of upper limb)
251	right upper limb	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8004;SRT;upper limb)	(G-A100;SRT;Right)
252	left upper limb	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8004;SRT;upper limb)	(G-A101;SRT;Left)
253	right shoulder	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D067C;SRT;shoulder region)	(G-A100;SRT;Right)
254	left shoulder	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D067C;SRT;shoulder region)	(G-A101;SRT;Left)
255	right arm	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D820B;SRT;upper arm)	(G-A100;SRT;Right)
256	left arm	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D820B;SRT;upper arm)	(G-A101;SRT;Left)
257	right elbow	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D06CA;SRT;elbow)	(G-A100;SRT;Right)
258	left elbow	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D06CA;SRT;elbow)	(G-A101;SRT;Left)
259	right forearm	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8508;SRT;forearm)	(G-A100;SRT;Right)
260	left forearm	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8508;SRT;forearm)	(G-A101;SRT;Left)
261	right wrist	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D0787;SRT;wrist region)	(G-A100;SRT;Right)
262	left wrist	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D0787;SRT;wrist region)	(G-A101;SRT;Left)
263	right hand	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8701;SRT;hand)	(G-A100;SRT;Right)
264	left hand	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D8701;SRT;hand)	(G-A101;SRT;Left)
265	skeleton of lower limb	rgb(255,238,170)	(T-D000A;SRT;Anatomical Structure)	(T-127BF;SRT;Entire bone of lower extremity)
266	muscles of lower limb	rgb(206,111,93)	(T-D000A;SRT;Anatomical Structure)	(T-1466E;SRT;Entire skeletal muscle of lower limb)
267	right lower limb	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D903B;SRT;lower limb)	(G-A100;SRT;Right)
268	left lower limb	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D903B;SRT;lower limb)	(G-A101;SRT;Left)
269	right hip	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D2503;SRT;hip region)	(G-A100;SRT;Right)
270	left hip	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D2503;SRT;hip region)	(G-A101;SRT;Left)
271	right thigh	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D9106.SRT;thigh)	(G-A100;SRT;Right)
272	left thigh	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D9106.SRT;thigh)	(G-A101;SRT;Left)
273	right knee	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D03BA;SRT;knee region)	(G-A100;SRT;Right)
274	left knee	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D03BA;SRT;knee region)	(G-A101;SRT;Left)
275	right leg	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D940B;SRT;lower leg; from knee to ankle)	(G-A100;SRT;Right)
276	left leg	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D940B;SRT;lower leg; from knee to ankle)	(G-A101;SRT;Left)
277	right foot	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D9706;SRT;foot)	(G-A100;SRT;Right)
278	left foot	rgb(177,122,101)	(T-D000A;SRT;Anatomical Structure)	(T-D9706;SRT;foot)	(G-A101;SRT;Left)
279	peripheral nervous system	rgb(216,186,0)	(T-D000A;SRT;Anatomical Structure)	(T-A0141;SRT;peripheral nervous system)
280	autonomic nerve	rgb(255,226,77)	(T-D000A;SRT;Anatomical Structure)	(T-A9606;SRT;autonomic nerve)
281	sympathetic trunk	rgb(255,243,106)	(T-D000A;SRT;Anatomical Structure)	(T-A9637;SRT;sympathetic trunk)
282	cranial nerves	rgb(255,234,92)	(T-D000A;SRT;Anatomical Structure)	(T-A800A;SRT;cranial nerve)
283	vagus nerve	rgb(240,210,35)	(T-D000A;SRT;Anatomical Structure)	(T-A8008;SRT;vagus nerve)
284	peripheral nerve	rgb(224,194,0)	(T-D000A;SRT;Anatomical Structure)	(T-A051B;SRT;peripheral nerve)
285	circulatory system	rgb(213,99,79)	(T-D000A;SRT;Anatomical Structure)	(T-30001;SRT;Cardiovascular system)
286	systemic arterial system	rgb(217,102,81)	(T-D000A;SRT;Anatomical Structure)	(T-4105E;SRT;Systemic arterial structure)
287	systemic venous system	rgb(0,147,202)	(T-D000A;SRT;Anatomical Structure)	(T-4000B;SRT;Entire systemic vein)
288	pulmonary arterial system	rgb(0,122,171)	(T-D000A;SRT;Anatomical Structure)	(T-44012;SRT;Entire pulmonary artery)
289	pulmonary venous system	rgb(186,77,64)	(T-D000A;SRT;Anatomical Structure)	(T-48500;SRT;Entire pulmonary vein)
290	lymphatic system	rgb(111,197,131)	(T-D000A;SRT;Anatomical Structure)	(T-C6004;SRT;lymphatic system)
291	needle	rgb(240,255,30)	(A-00004;SRT;Physical Object)	(A-30360;SRT;Needle)
309	cyst	rgb(205,205,100)	(M-01000;SRT;Morphologically Altered Structure)	(M-3340A;SRT;Cyst)

References

• Quantitative Imaging Network (QIN)
• Main page summarizing the scope and development of this functionality: http://wiki.na-mic.org/Wiki/index.php?title=AIM_Annotations_integration_with_3DSlicer
• Annotation Image Markup home page
• DICOM correction proposal CP-1528 (ftp://medical.nema.org/medical/dicom/cp/cp1258_01.pdf, Refactor segment description, extend segment types and anatomy)

Information for Developers

• Source code of the module: https://github.com/fedorov/Reporting