Difference between revisions of "Documentation/Nightly/Modules/FiberBundleToLabelMap"
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| − | + | Title: Fiber Bundle to Label Map | |
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| + | Author(s)/Contributor(s): Steve Pieper (SPL, Isomics, Inc.), Isaiah Norton (SPL, LMI, BWH, SlicerDMRI) | ||
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| + | License: 3D Slicer Contribution and Software License Agreement | ||
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| + | Acknowledgements: The SlicerDMRI developers gratefully acknowledge funding for this project provided by NIH NCI ITCR U01CA199459 (Open Source Diffusion MRI Technology For Brain Cancer Research), NIH P41EB015898 (National Center for Image-Guided Therapy) and NIH P41EB015902 (Neuroimaging Analysis Center), as well as the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. | ||
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| + | Contact: slicer-users@bwh.harvard.edu | ||
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| + | Website: http://slicerdmri.github.io/ | ||
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[[File:FiberBundleToLabelMap-Screen Shot 2013-07-08 at 11.27.12 AM.png|thumb|300px|Example of the label map generated from a set of fibers]] | [[File:FiberBundleToLabelMap-Screen Shot 2013-07-08 at 11.27.12 AM.png|thumb|300px|Example of the label map generated from a set of fibers]] | ||
| − | This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle. | + | This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle. |
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| + | This module first upsamples points along the fiber bundle in order to get better voxel coverage. | ||
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| − | + | * http://slicerdmri.github.io/ | |
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This is a python scripted module. | This is a python scripted module. | ||
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| + | * https://github.com/SlicerDMRI | ||
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Latest revision as of 20:52, 6 July 2016
Home < Documentation < Nightly < Modules < FiberBundleToLabelMap
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For the latest Slicer documentation, visit the read-the-docs. |
Introduction and Acknowledgements
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Author(s)/Contributor(s): Steve Pieper (SPL, Isomics, Inc.), Isaiah Norton (SPL, LMI, BWH, SlicerDMRI) License: 3D Slicer Contribution and Software License Agreement Acknowledgements: The SlicerDMRI developers gratefully acknowledge funding for this project provided by NIH NCI ITCR U01CA199459 (Open Source Diffusion MRI Technology For Brain Cancer Research), NIH P41EB015898 (National Center for Image-Guided Therapy) and NIH P41EB015902 (Neuroimaging Analysis Center), as well as the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Contact: slicer-users@bwh.harvard.edu Website: http://slicerdmri.github.io/ | |||||||||||
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Module Description
This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle.
This module first upsamples points along the fiber bundle in order to get better voxel coverage.
Tutorials
Panels and their use
- Fiber Bundle
- Pick a fiber bundle to rasterize
- Target Label Map
- The fibers will be painted into this label map. Note that this will add to and overwrite existing data, but does not clear the label map to zero first.
- Label Value
- Numerical value to be written into the label map.
Similar Modules
References
Information for Developers
This is a python scripted module.
