Difference between revisions of "Slicer:Debian"
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==== BUILD BUG ==== | ==== BUILD BUG ==== | ||
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+ | https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735248 | ||
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-- Looking for Q_WS_MAC - not found | -- Looking for Q_WS_MAC - not found | ||
-- Found Qt4: /usr/bin/qmake (found version "4.8.6") | -- Found Qt4: /usr/bin/qmake (found version "4.8.6") | ||
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PYTHON_LIBRARIES and PYTHON_INCLUDE_DIRS should be set to build | PYTHON_LIBRARIES and PYTHON_INCLUDE_DIRS should be set to build | ||
CTK_LIB_Scripting/Python | CTK_LIB_Scripting/Python | ||
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==== alternative with system QT ==== | ==== alternative with system QT ==== |
Revision as of 03:38, 20 November 2015
Home < Slicer:DebianContents
Intro
Instructions how to build Slicer from scratch on Debian systems
UNDER CONSTRUCTION
Debian 8 "jessie"
Debian 8 "jessie" contains all tools to compile 3D Slicer.
It is easier to compile Slicer against the system Qt libraries. This saves about 30 minutes compile time.
3D Slicer 4.5 (Nov 2015)
sudo aptitude update sudo aptitude install git-svn gitk subversion git gcc g++ make cmake-curses-gui libglu1-mesa-dev zlib1g-dev libxt-dev sudo aptitude install libqt4-dev
git clone https://github.com/Slicer/Slicer.git cd Slicer git checkout 46a42f4fc # TODO git tag? # this is the Slicer release 4.5.0 from Nov 12 2015 mkdir ../Slicer4-SuperBuild-Debug cd ../Slicer4-SuperBuild-Debug cmake ../Slicer -DSlicer_REQUIRED_QT_VERSION:STRING=4.8.6 # if using system QT cmake ../Slicer -DSlicer_USE_GIT_PROTOCOL:BOOL=0 # optional for firewall issues make -j8
BUILD BUG
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735248
-- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/bin/qmake (found version "4.8.6") -- Generated: /results/Slicer4-SuperBuild-Debug/CTK-build/DGraphInput-alldep.txt -- Generated: /results/Slicer4-SuperBuild-Debug/CTK-build/DGraphInput-alldep-withext.txt -- Enabling option [CTK_LIB_Visualization/VTK/Core] required by [CTKVisualizationVTKWidgets] -- Found PythonInterp: /results/Slicer4-SuperBuild-Debug/python-install/bin/SlicerPython (found version "2.7.10") -- Could NOT find PythonLibs (missing: PYTHON_INCLUDE_DIRS) (found version "2.7.10") CMake Error at CMakeLists.txt:893 (message): PYTHON_LIBRARIES and PYTHON_INCLUDE_DIRS should be set to build CTK_LIB_Scripting/Python
alternative with system QT
sudo aptitude install libxext-dev libxrender-dev make g++ # download the 'supported' Qt version [1] wget http://download.qt.io/archive/qt/4.8/4.8.6/qt-everywhere-opensource-src-4.8.6.tar.gz tar xvfz qt-everywhere-opensource-src-4.8.6.tar.gz mkdir qt-everywhere-opensource-build-4.8.6 cd qt-everywhere-opensource-src-4.8.6 ./configure -prefix ../qt-everywhere-opensource-build-4.8.6 -debug-and-release -opensource -confirm-license -no-qt3support -webkit -nomake examples -nomake demos make -j8 make install
cmake -DQT_QMAKE_EXECUTABLE:FILEPATH=~/qt-everywhere-opensource-build-4.8.6/bin/qmake ../Slicer
3D Slicer 4.4 (Nov 2014)
sudo aptitude install libxext-dev libxrender-dev make g++ # download the 'supported' Qt version [2] wget https://download.qt.io/archive/qt/4.7/qt-everywhere-opensource-src-4.7.4.tar.gz mkdir qt-everywhere-opensource-build-4.7.4 tar xvfz qt-everywhere-opensource-src-4.7.4.tar.gz cd qt-everywhere-opensource-src-4.7.4 ./configure -prefix ../qt-everywhere-opensource-build-4.7.4 -debug-and-release -opensource -confirm-license -no-qt3support -webkit -nomake examples -nomake demos make -j8 make install
#cmake 2.8.6 required because of libarchive sudo aptitude install git-svn gitk subversion git gcc g++ make cmake-curses-gui libglu1-mesa-dev zlib1g-dev libxt-dev #libqt4-dev git clone https://github.com/Slicer/Slicer.git cd Slicer git svn init http://svn.slicer.org/Slicer4/trunk git update-ref refs/remotes/git-svn refs/remotes/origin/master git checkout master git svn rebase git checkout v4.4.0 # optional: this is a Slicer release 4.4.0 from Nov 02 2014
mkdir ../Slicer4-SuperBuild-Debug cd ../Slicer4-SuperBuild-Debug #cmake ../Slicer -DSlicer_REQUIRED_QT_VERSION:STRING=4.8.6 # if using system QT #cmake -DQT_QMAKE_EXECUTABLE:FILEPATH=~/qt-everywhere-opensource-build-4.7.4/bin/qmake -DITK_VERSION_MAJOR:STRING=4 -DSlicer_USE_GIT_PROTOCOL:BOOL=OFF ../Slicer cmake -DQT_QMAKE_EXECUTABLE:FILEPATH=~/qt-everywhere-opensource-build-4.7.4/bin/qmake ../Slicer make -j8
# runtime dependency: sudo aptitude install python-tk
Usage
Use Slicer's command line tools
/usr/lib/Slicer3/Plugins/AffineRegistration --help
or start Slicer's GUI
slicer3