Difference between revisions of "Documentation/4.1/SlicerApplication/LookupTables/TractographyColors"
From Slicer Wiki
| Line 83: | Line 83: | ||
|- | |- | ||
|11 | |11 | ||
| − | |r | + | |r AF |
|style="background:rgb(221,130,101)"|rgb(221,130,101) | |style="background:rgb(221,130,101)"|rgb(221,130,101) | ||
| − | |right arcuate | + | |right arcuate fasicle |
|- | |- | ||
|12 | |12 | ||
| − | |l | + | |l AF |
|style="background:rgb(216,101,79)"|rgb(216,101,79) | |style="background:rgb(216,101,79)"|rgb(216,101,79) | ||
| − | |left arcuate | + | |left arcuate fasicle |
|- | |- | ||
|13 | |13 | ||
|r IOFF | |r IOFF | ||
|style="background:rgb(144,238,144)"|rgb(144,238,144) | |style="background:rgb(144,238,144)"|rgb(144,238,144) | ||
| − | |right inferior occipito-frontal | + | |right inferior occipito-frontal fasicle |
|- | |- | ||
|14 | |14 | ||
|l IOFF | |l IOFF | ||
|style="background:rgb( 60, 179, 113)"|rgb( 60, 179, 113) | |style="background:rgb( 60, 179, 113)"|rgb( 60, 179, 113) | ||
| − | |left inferior occipito-frontal | + | |left inferior occipito-frontal fasicle |
|- | |- | ||
|15 | |15 | ||
|r ILF | |r ILF | ||
|style="background:rgb(220,245,20)"|rgb(220,245,20) | |style="background:rgb(220,245,20)"|rgb(220,245,20) | ||
| − | |right inferior longitudinal | + | |right inferior longitudinal fasicle |
|- | |- | ||
|16 | |16 | ||
|l ILF | |l ILF | ||
|style="background:rgb(176, 176, 8)"|rgb(176, 176, 8) | |style="background:rgb(176, 176, 8)"|rgb(176, 176, 8) | ||
| − | |left inferior longitudinal | + | |left inferior longitudinal fasicle |
|- | |- | ||
|17 | |17 | ||
| − | |r | + | |r UF |
|style="background:rgb(255,250,220)"|rgb(255,250,220) | |style="background:rgb(255,250,220)"|rgb(255,250,220) | ||
| − | |right uncinate | + | |right uncinate fasicle |
|- | |- | ||
|18 | |18 | ||
| − | |l | + | |l UF |
|style="background:rgb(230,220,70)"|rgb(230,220,70) | |style="background:rgb(230,220,70)"|rgb(230,220,70) | ||
| − | |left uncinate | + | |left uncinate fasicle |
|- | |- | ||
|19 | |19 | ||
| Line 145: | Line 145: | ||
|r CB | |r CB | ||
|style="background:rgb(255, 99, 71)"|rgb(255, 99, 71) | |style="background:rgb(255, 99, 71)"|rgb(255, 99, 71) | ||
| − | |right | + | |right cingulum bundle |
|- | |- | ||
|24 | |24 | ||
|l CB | |l CB | ||
|style="background:rgb(250, 90, 90)"|rgb(250, 90, 90) | |style="background:rgb(250, 90, 90)"|rgb(250, 90, 90) | ||
| − | |left | + | |left cingulum bundle |
|- | |- | ||
|25 | |25 | ||
| − | |r SLF | + | |r SLF I |
|style="background:rgb(183,214,211)"|rgb(183,214,211) | |style="background:rgb(183,214,211)"|rgb(183,214,211) | ||
| − | |right superior longitudinal | + | |right superior longitudinal fasicle I |
|- | |- | ||
|26 | |26 | ||
| − | |l SLF | + | |l SLF I |
|style="background:rgb(152,189,207)"|rgb(152,189,207) | |style="background:rgb(152,189,207)"|rgb(152,189,207) | ||
| − | |left superior longitudinal | + | |left superior longitudinal fasicle I |
|- | |- | ||
|27 | |27 | ||
| − | |r SLF | + | |r SLF II |
|style="background:rgb(178,212,242)"|rgb(178,212,242) | |style="background:rgb(178,212,242)"|rgb(178,212,242) | ||
| − | |right superior longitudinal | + | |right superior longitudinal fasicle II |
|- | |- | ||
|28 | |28 | ||
| − | |l SLF | + | |l SLF II |
|style="background:rgb(111,184,210)"|rgb(111,184,210) | |style="background:rgb(111,184,210)"|rgb(111,184,210) | ||
| − | |left superior longitudinal | + | |left superior longitudinal fasicle II |
|- | |- | ||
|29 | |29 | ||
| − | |r SLF | + | |r SLF III |
|style="background:rgb(111,197,131)"|rgb(111,197,131) | |style="background:rgb(111,197,131)"|rgb(111,197,131) | ||
| − | |right superior longitudinal | + | |right superior longitudinal fasicle III |
|- | |- | ||
|30 | |30 | ||
| − | |l SLF | + | |l SLF III |
|style="background:rgb(68,172,100)"|rgb(68,172,100) | |style="background:rgb(68,172,100)"|rgb(68,172,100) | ||
| − | |left superior longitudinal | + | |left superior longitudinal fasicle III |
|- | |- | ||
|31 | |31 | ||
|r MDLF | |r MDLF | ||
|style="background:rgb(85,188,255)"|rgb(85,188,255) | |style="background:rgb(85,188,255)"|rgb(85,188,255) | ||
| − | |right middle longitudinal | + | |right middle longitudinal fasicle |
|- | |- | ||
|32 | |32 | ||
|l MDLF | |l MDLF | ||
|style="background:rgb( 65, 105, 225)"|rgb( 65, 105, 225) | |style="background:rgb( 65, 105, 225)"|rgb( 65, 105, 225) | ||
| − | |left middle longitudinal | + | |left middle longitudinal fasicle |
|- | |- | ||
|33 | |33 | ||
| Line 205: | Line 205: | ||
|r SOFF | |r SOFF | ||
|style="background:rgb(216,191,216)"|rgb(216,191,216) | |style="background:rgb(216,191,216)"|rgb(216,191,216) | ||
| − | |right superior occipito-frontal | + | |right superior occipito-frontal fasicle |
|- | |- | ||
|36 | |36 | ||
|l SOFF | |l SOFF | ||
|style="background:rgb(221, 160, 221)"|rgb(221, 160, 221) | |style="background:rgb(221, 160, 221)"|rgb(221, 160, 221) | ||
| − | |left superior occipito-frontal | + | |left superior occipito-frontal fasicle |
|- | |- | ||
|37 | |37 | ||
Revision as of 16:09, 12 December 2012
Home < Documentation < 4.1 < SlicerApplication < LookupTables < TractographyColorsTemplate:Documentation/4.1/TractographyColors
 |
WARNING: This LUT is Work in Progress, which means:
|
- Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
- Go here to create a text file in Slicer LUT format.
- If changing the order of the table, the indices can be recreated with this tcl script.
This is the look-up table for the parcellation of the white matter of the brain.
- Authors: Ron Kikinis, Demian Wassermann, Marianna Jakab
Lookup table
| integer_label | text_label | color | notes |
|---|---|---|---|
| 0 | background | rgba(0,0,0,0) | |
| 1 | CC | rgb(255, 215, 0) | corpus callosum |
| 2 | CC genu | rgb(225, 215, 0) | genu of the corpus callosum |
| 3 | CC body | rgb(195, 215, 0) | body of the corpus callosum |
| 4 | CC splenium | rgb(165, 215, 0) | splenium of the corpus callosum |
| 5 | DHC | rgb(122, 120, 170) | dorsal hippocampal comissure |
| 6 | AnC | rgb(92, 140, 170) | anterior comissure |
| 7 | PC | rgb(62, 160, 170) | posterior comissure |
| 8 | FC | rgb( 32, 180, 170) | forniceal comissure |
| 9 | PT | rgb(92, 161, 124) | pontine tract |
| 10 | U | rgb(83,146,164) | short cortico-cortical pathway |
| 11 | r AF | rgb(221,130,101) | right arcuate fasicle |
| 12 | l AF | rgb(216,101,79) | left arcuate fasicle |
| 13 | r IOFF | rgb(144,238,144) | right inferior occipito-frontal fasicle |
| 14 | l IOFF | rgb( 60, 179, 113) | left inferior occipito-frontal fasicle |
| 15 | r ILF | rgb(220,245,20) | right inferior longitudinal fasicle |
| 16 | l ILF | rgb(176, 176, 8) | left inferior longitudinal fasicle |
| 17 | r UF | rgb(255,250,220) | right uncinate fasicle |
| 18 | l UF | rgb(230,220,70) | left uncinate fasicle |
| 19 | r CST | rgb(230, 230, 250) | right cortico-spinal tract |
| 20 | l CST | rgb(200,200,235) | left cortico-spinal tract |
| 21 | r OR | rgb(135, 206, 235) | right optic radiation |
| 22 | l OR | rgb(0,151,206) | left optic radiation |
| 23 | r CB | rgb(255, 99, 71) | right cingulum bundle |
| 24 | l CB | rgb(250, 90, 90) | left cingulum bundle |
| 25 | r SLF I | rgb(183,214,211) | right superior longitudinal fasicle I |
| 26 | l SLF I | rgb(152,189,207) | left superior longitudinal fasicle I |
| 27 | r SLF II | rgb(178,212,242) | right superior longitudinal fasicle II |
| 28 | l SLF II | rgb(111,184,210) | left superior longitudinal fasicle II |
| 29 | r SLF III | rgb(111,197,131) | right superior longitudinal fasicle III |
| 30 | l SLF III | rgb(68,172,100) | left superior longitudinal fasicle III |
| 31 | r MDLF | rgb(85,188,255) | right middle longitudinal fasicle |
| 32 | l MDLF | rgb( 65, 105, 225) | left middle longitudinal fasicle |
| 33 | r EC | rgb(196, 110, 0) | right extreme capsule |
| 34 | l EC | rgb(160, 82, 45) | left extreme capsule |
| 35 | r SOFF | rgb(216,191,216) | right superior occipito-frontal fasicle |
| 36 | l SOFF | rgb(221, 160, 221) | left superior occipito-frontal fasicle |
| 37 | r CT | rgb(245, 222, 179) | right cortico-thalamical pathways |
| 38 | l CT | rgb(210, 180, 140) | left cortico-thalamical pathways |
| 39 | r CS | rgb(244, 164, 96) | right cortico-striatal pathways |
| 40 | l CS | rgb(177,122,101) | left cortico-striatal pathways |
| 41 | r CP | rgb(250,250,225) | right cortico-pontine projections |
| 42 | l CP | rgb(200,200,200) | left cortico-pontine projections |
| 43 | PF | rgb(100, 177, 198) | peritumoral fibers |
| 44 | rgb(255,255,255) | ||
| 45 | rgb(255,255,255) | ||
| 46 | rgb(255,255,255) | ||
| 47 | rgb(255,255,255) | ||
| 48 | rgb(255,255,255) | ||
| 49 | rgb(255,255,255) | ||
| 50 | rgb(255,255,255) | ||
| 51 | rgb(255,255,255) | ||
| 52 | rgb(255,255,255) | ||
| 53 | rgb(255,255,255) | ||
| 54 | rgb(255,255,255) | ||
| 55 | rgb(255,255,255) | ||
| 56 | rgb(255,255,255) | ||
| 57 | rgb(255,255,255) | ||
| 58 | rgb(255,255,255) | ||
| 69 | rgb(255,255,255) | ||
| 60 | rgb(255,255,255) | ||
| 61 | P1 | rgb(252,115,105) | probe 1 |
| 62 | P2 | rgb(222,115,105) | probe 2 |
| 63 | P3 | rgb(192,115,105) | probe 3 |
| 64 | P4 | rgb(162,115,105) | probe 4 |
