Difference between revisions of "CCA:Atlases:Florins 2010 Hierarchy"
From Slicer Wiki
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===skull=== | ===skull=== | ||
| − | *frontal bone | + | *right frontal bone |
| − | *parietal bone | + | *left frontal bone |
| − | *temporal bone | + | *right parietal bone |
| − | **stapes | + | *left parietal bone |
| − | **incus | + | *right temporal bone |
| − | **malleus | + | **right stapes |
| − | *sphenoid bone | + | **right incus |
| − | *ethmoid bone | + | **right malleus |
| + | *left temporal bone | ||
| + | **left stapes | ||
| + | **left incus | ||
| + | **left malleus | ||
| + | *right sphenoid bone | ||
| + | *left sphenoid bone | ||
| + | *right ethmoid bone | ||
| + | *left ethmoid bone | ||
*occipital bone | *occipital bone | ||
*maxilla | *maxilla | ||
| − | *zygomatic bone | + | *right zygomatic bone |
| − | *lacrimal bone | + | *left zygomatic bone |
| + | *right lacrimal bone | ||
| + | *left lacrimal bone | ||
*vomer bone | *vomer bone | ||
| − | *palatine bone | + | *right palatine bone |
| + | *left palatine bone | ||
*mandible | *mandible | ||
Revision as of 19:32, 3 June 2010
Home < CCA:Atlases:Florins 2010 HierarchyContents
- 1 body
- 1.1 head
- 1.2 neck
- 1.3 thorax
- 1.4 abdomen
- 1.5 female external genitalia
- 1.6 male external genitalia
- 1.7 upper limb
- 1.8 peripheral nervous system
- 1.9 circulatory system
- 1.10 lymphatic system
- 2 material
- 3 pathology
- 4 foreign objects
- 5 segmentation regions
body
head
soft tissue of the head
- skin of head
- muscles of head
- masticatory muscles
- right temporal muscle
- left temporal muscle
- right masseter muscle
- left masseter muscle
- right lateral pterygoid muscle
- left lateral pterygoid muscle
- right medial pterygoid muscle
- left medial pterygoid muscle
- facial muscles
- frontal muscle
- corrugator muscle
- right orbicularis occuli muscle
- left orbicularis occuli muscle
- right levator angulis oris muscle
- left levator angulis oris muscle
- orbicularis oris muscle
- right risorius muscle
- left risorius muscle
- right nasalis muscle
- left nasalis muscle
- right mentalis muscle
- left mentalis muscle
- right depressor labii inferioris muscle
- left depressor labii inferioris muscle
- right depressor angulis oris muscle
- left depressor angulis oris muscle
- right buccinator muscle
- left buccinator muscle
- right occipitalis muscle
- left occipitalis muscle
- masticatory muscles
- salivary glands
- right parotid glands
- left parotid glands
- right sublingual glands
- left sublingual glands
- right submandibular glands
- left submandibular glands
- lips
- nose
- nasal septum
- right nostril
- left nostril
- tongue
- soft palate
- right tonsil
- left tonsil
- right external ear
- left external ear
- right middle ear
- left middle ear
- right internal ear
- left internal ear
- right eyeball
- left eyeball
skull
- right frontal bone
- left frontal bone
- right parietal bone
- left parietal bone
- right temporal bone
- right stapes
- right incus
- right malleus
- left temporal bone
- left stapes
- left incus
- left malleus
- right sphenoid bone
- left sphenoid bone
- right ethmoid bone
- left ethmoid bone
- occipital bone
- maxilla
- right zygomatic bone
- left zygomatic bone
- right lacrimal bone
- left lacrimal bone
- vomer bone
- right palatine bone
- left palatine bone
- mandible
teeth
central nervous system
meninges
- dura mater
- arachnoid
- pia mater
brain
- CSF spaces
- ventricles of brain
- lateral ventricle r/l
- third ventricle
- cerebral aqueduct
- fourth ventricle
- subarachnoid space
- ventricles of brain
- brain parenchyma
- gray matter of brain
- telencephalon
- cerebral cortex
- frontal lobe r/l
- superior frontal gyrus r/l
- middle frontal gyrus r/l
- inferior frontal gyrus r/l
- orbital gyri r/l
- straight gyrus r/l
- precentral gyrus r/l
- paracentral lobule r/l
- frontal pole r/l
- temporal lobe r/l
- superior temporal gyrus r/l
- middle temporal gyrus r/l
- inferior temporal gyrus r/l
- hippocampus r/l
- parahippocampal gyrus r/l
- temporal part of medial occipitotemporal gyrus r/l
- temporal part of lateral occipitotemporal gyrus r/l
- uncus r/l
- parietal lobe r/l
- postcentral gyrus r/l
- superior parietal lobule r/l
- inferior parietal lobule r/l
- precuneus r/l
- occipital lobe r/l
- superior occipital gyri r/l
- inferior occipital gyri r/l
- gyrus descendens r/l
- lingual gyrus r/l
- occipital part of medial occipitotemporal gyrus r/l
- occipital part of lateral occipitotemporal gyrus r/l
- cuneus r/l
- occipital pole r/l
- insular lobe r/l
- limen of insula r/l
- long insular gyrus r/l
- short insular gyri r/l
- limbic lobe r/l
- cingulate gyrus r/l
- paraterminal gyrus r/l
- indusium griseum r/l
- olfactory bulb r/l
- olfactory tract r/l
- frontal lobe r/l
- subcortical gray matter of telencephalon r/l
- striatum r/l
- nucleus accumbens r/l
- caudate nucleus r/l
- putamen r/l
- pallidum r/l
- globus pallidus pars externa r/l
- globus pallidus pars interna r/l
- septal nuclei
- amygdaloid complex r/l
- claustrum r/l
- striatum r/l
- cerebral cortex
- diencephalon r/l
- thalamus r/l
- thalamic nuclei r/l
- subthalamus r/l
- subthalamic nucleus r/l
- hypothalamus
- hypothalamic nuclei
- mamillary bodies r/l
- substantia perforata r/l
- anterior substantia perforata r/l
- posterior substantia perforata r/l
- pituitary infundibulum
- epithalamus r/l
- habenula r/l
- habenular nuclei r/l
- pineal body
- habenula r/l
- gray matter of mesencephalon r/l
- red nucleus r/l
- substantia nigra r/l
- substantia nigra pars compacta r/l
- substantia nigra pars reticularis r/l
- superior colliculus r/l
- inferior colliculus r/l
- occulomotor nerve nucleus (CN III) r/l
- trochlear nerve nucleus (CN IV) r/l
- mesencephalic nucleus of the trigeminal nerve (CN V) r/l
- periaqueductal gray matter
- gray matter of metencephalon
- gray matter of pons r/l
- principal sensory nucleus of trigeminal nerve (CN V) r/l
- motor nucleus of the trigeminal nerve (CN V) r/l
- abducent nerve nucleus r/l
- facial nerve nucleus r/l
- cerebellar gray matter
- cerebellar cortex r/l
- subcortical cerebellar gray matter
- dentate nucleus r/l
- emboliform nucleus r/l
- globose nucleus r/l
- fastigial nucleus r/l
- gray matter of myelencephalon (medulla oblongata)
- spinal nucleus of the trigeminal nerve (CN V) r/l
- cochlear nuclei (CN VIII) r/l
- vestibular nuclei (CN VIII) r/l
- superior salivatory nucleus r/l
- inferior salivatory nucleus r/l
- nucleus ambiguus r/l
- dorsal nucleus of vagus nerve (CN X) r/l
- solitary tract nucleus r/l
- hypoglossal nerve nucleus r/l
- gray matter of pons r/l
- thalamus r/l
- telencephalon
- cerebral white matter
- association white matter tracts
- U-fibers
- superior longitudinal fasciculus r/l
- inferior longitudinal fasciculus r/l
- arcuate fasciculus r/l
- uncinate fasciculus r/l
- cingulum bundle r/l
- projection fibers
- corticospinal tract r/l
- corticomesencephalic tract r/l
- corticopontine tract r/l
- corticobulbar tract r/l
- optic radiation r/l
- radiation of thalamus r/l
- medial lemniscus r/l
- lateral lemniscus r/l
- superior cerebellar peduncles r/l
- middle cerebellar peduncles r/l
- inferior cerebellar peduncles r/l
- optic chiasm
- left optic tract r/l
- right optic tract r/l
- fornix r/l
- mammillothalamic tract r/l
- mamillotegmental tract r/l
- thalamic fasciculus r/l
- ansa lenticularis r/l
- lenticular fasciculus r/l
- commissural fibers
- corpus callosum
- anterior commissure
- posterior commissure
- association white matter tracts
- cerebellar white matter
- gray matter of brain
spinal cord
- gray matter of spinal cord
- anterior horn r/l
- posterior horn r/l
- white matter of spinal cord
- anterior column r/l
- lateral column r/l
- posterior column r/l
endocrine system of brain
- pituitary gland
- adenohypophysis
- neurohypophysis
neck
soft tissue of neck
skin of neck
muscles of neck
pharynx
larynx
- thyroid cartilage
- cricoid cartilage
- epiglottic cartilage
- arytenoid cartilages r/l
- vocal cords r/l
thyroid gland
====parathyroid glands==== r/l
skeleton of neck
- hyoid bone
- cervical vertebral column
- cervical vertebrae
- first cervical vertebra
- second cervical vertebra
- third cervical vertebra
- fourth cervical vertebra
- fifth cervical vertebra
- sixth cervical vertebra
- seventh cervical vertebra
- cervical vertebrae
thorax
soft tissue of thorax
soft tissue of thoracic wall
Skin of thoracic wall
muscles of thoracic wall
contents of thoracic cavity
trachea
bronchi
- main bronchus r/l
right lung
- superior lobe of right lung
- middle lobe of right lung
- inferior lobe of right lung
left lung
- superior lobe of left lung
- inferior lobe of left lung
pleura
- parietal pleura
- visceral pleura
- pleural cavity
heart
- atrium r/l
- atrial septum
- ventricular septum
- right ventricle of heart
- papillary muscles of right ventricle of heart
- chordae tendineae of right ventricle of heart
- left ventricle of heart
- papillary muscles of left ventricle of heart
- chordae tendineae of left ventricle of heart
- mitral valve
- tricuspid valve
- aortic valve
- pulmonary valve
pericardium
- pericardial cavity
esophagus
thymus
mediastinum
skeleton of thorax
- thoracic vertebral column
- thoracic vertebrae
- first thoracic vertebra
- second thoracic vertebra
- third thoracic vertebra
- fourth thoracic vertebra
- fifth thoracic vertebra
- sixth thoracic vertebra
- seventh thoracic vertebra
- eighth thoracic vertebra
- ninth thoracic vertebra
- tenth thoracic vertebra
- eleventh thoracic vertebra
- twelfth thoracic vertebra
- thoracic vertebrae
- ribs
- first rib r/l
- second rib r/l
- third rib r/l
- fourth rib r/l
- fifth rib r/l
- sixth rib r/l
- seventh rib r/l
- eighth rib r/l
- ninth rib r/l
- tenth rib r/l
- eleventh rib r/l
- twelfth rib r/l
- sternum
- manubrium
- body of sternum
- xyphoid process
- clavicle r/l
abdomen
soft tissue of abdomen
soft tissue of abdominal wall
skin of abdominal wall
muscles of abdominal wall
contents of abdominal cavity
- peritoneum
- parietal peritoneum
- visceral peritoneum
- omentum
- peritoneal cavity
- bursa omentalis
- rectouterine pouch
- falciform ligament
- mesentery
- mesocolon
- transverse mesocolon
- sigmoid mesocolon
- broad ligament of uterus
- mesometrium
- mesosalpinx
- mesovarium
- retroperitoneal space
- stomach
- cardia
- fundus of stomach
- body of stomach
- pylorus
- duodenum
- duodenal ampulla
- small bowel
- jejunum
- ileum
- colon
- cecum
- ileocecal valve
- appendix
- ascending colon
- transverse colon
- sigmoid colon
- rectum
- anus
- cecum
- liver
- capsule of liver
- right lobe of liver
- left lobe of liver
- caudate lobe of liver
- quadrate lobe of liver
- ligamentum teres of liver
- biliary tree
- hepatic duct r/l
- common hepatic duct
- common bile duct
- cystic duct
- gallbladder
- pancreas
- head of pancreas
- body of pancreas
- tail of pancreas
- pancreatic duct
- islets of Langerhans
- spleen
- urinary system
- right kidney
- parenchyma of right kidney
- cortex of right kidney
- medulla of right kidney
- parenchyma of right kidney
- right renal pelvis
- left kidney
- parenchyma of left kidney
- cortex of left kidney
- medulla of left kidney
- parenchyma of left kidney
- left renal pelvis
- right ureter
- left ureter
- urinary bladder
- urethra
- right kidney
- suprarenal glands
- corticosuprarenal glands
- medullosuprarenal glands
- female internal genitalia
- uterus
- fundus of uterus
- body of uterus
- cervix
- round ligament r/l
- uterosacral ligament r/l
- pubocervical ligament
- fallopian tubes r/l**ovaries
- vagina
- uterus
- male internal genitalia
- prostate
- seminal vesicle r/l
- deferent ducts r/l
skeleton of abdomen
vertebral column of abdomen
lumbar vertebral column
- lumbar vertebrae
- first lumbar vertebra
- second lumbar vertebra
- third lumbar vertebra
- fourth lumbar vertebra
- fifth lumbar vertebra
sacrum
coccyx
female external genitalia
vulva
- vulval vestibule
- hymen
- major labia r/l
- minor labia r/l
- praeputium
- clitoris
- glans of clitoris
- body of clitoris
- corpus cavernosum of clitoris
- prepuce of clitoris
- Bartolin's glands r/l
male external genitalia
penis
- glans of penis
- meatus
- shaft
- corpus cavernosum of penis
- spongious body
- prepuce of penis
scrotum
- skin of scrotum
- dartos layer
- cremaster muscle r/l
- testicle r/l
- epididymis r/l
- spermatic cord r/l
upper limb
===shoulder=== r/l ====soft tissue of shoulder==== r/l
- skin of shoulder r/l
- muscles and tendons of shoulder r/l
- muscles of shoulder r/l
- tendons of shoulder r/l
====skeleton of shoulder==== r/l
- scapula r/l
===arm=== r/l ====soft tissue of arm==== r/l
- skin of arm r/l
- muscles and tendons of arm r/l
- muscles of arm r/l
- tendons of arm r/l
====skeleton of arm==== r/l
- humerus r/l
===elbow=== r/l ====soft tissue of elbow==== r/l
- skin of elbow r/l
- muscles and tendons of elbow r/l
- muscles of elbow r/l
- tendons of elbow r/l
====skeleton of elbow==== r/l
- elbow joint r/l
===forearm=== r/l ====soft tissue of forearm==== r/l
- skin of forearm r/l
- muscles and tendons of forearm r/l
- muscles of forearm r/l
- tendons of forearm r/l
====skeleton of forearm==== r/l
- radius r/l
- ulna r/l
===hand=== r/l
====soft tissue of hand==== r/l
- skin of hand r/l
- muscles and tendons of hand r/l
- muscles of hand r/l
- tendons of hand r/l
====skeleton of hand==== r/l
- wrist r/l
- scaphoid r/l
- lunate r/l
- triquetrum r/l
- pisiform r/l
- trapezium r/l
- trapezoid r/l
- capitate r/l
- hamate r/l
- metacarpus r/l
- metacarpal bones r/l
- right first metacarpal bone r/l
- right second metacarpal bone r/l
- right third metacarpal bone r/l
- right fourth metacarpal bone r/l
- right fifth metacarpal bone r/l
- left first metacarpal bone r/l
- left second metacarpal bone r/l
- left third metacarpal bone r/l
- left fourth metacarpal bone r/l
- left fifth metacarpal bone r/l
- metacarpal bones r/l
- phalanges of hand r/l
==lower limb== r/l ===hip=== r/l ====soft tissue of hip==== r/l
- skin of hip r/l
- muscles and tendons of hip r/l
- muscles of hip r/l
- tendons of hip r/l
====skeleton of hip==== r/l
- hip joint r/l
- hip bone r/l
- ischium r/l
- ilium r/l
- pubis r/l
===thigh=== r/l ====soft tissue of thigh==== r/l
- skin of thigh r/l
- muscles and tendons of thigh r/l
- muscles of thigh r/l
- tendons of thigh r/l
====skeleton of thigh==== r/l
- femur r/l
===knee=== r/l ====soft tissue of knee==== r/l
- skin of knee r/l
- muscles and tendons of knee r/l
- muscles of knee r/l
- tendons of knee r/l
====skeleton of knee==== r/l
- knee joint r/l
===leg=== r/l ====soft tissue of leg==== r/l
- skin of leg r/l
- muscles and tendons of leg r/l
- muscles of leg r/l
- tendons of leg r/l
====skeleton of leg ==== r/l
- tibia r/l
- fibula r/l
===foot=== r/l
====soft tissue of foot==== r/l
- skin of foot r/l
- muscles and tendons of foot r/l
- muscles of foot r/l
- tendons of foot r/l
====skeleton of foot==== r/l
- ankle r/l
- talus r/l
- calcaneus r/l
- navicular r/l
- first cuneiform r/l
- second cuneiform r/l
- third cuneiform r/l
- cuboid r/l
- metatarsus r/l
- metatarsal bones r/l
- first metatarsal bone r/l
- second metatarsal bone r/l
- third metatarsal bone r/l
- fourth metatarsal bone r/l
- fifth metatarsal bone r/l
- metatarsal bones r/l
- phalanges of foot r/l
peripheral nervous system
cranial nerves
- right olfactory nerve (CN I)
- right optic nerve (CN II)
- right oculomotor nerve (CN III)
- right trochlear nerve (CN IV)
- right trigeminal nerve (CN V)
- right abducent nerve (CN VI)
- right facial nerve (CN VII)
- right intermediate nerve (CN VII b)
- right vestibulocochlear nerve (CN VIII)
- right glossopharyngeal nerve (CN IX)
- right vagal nerve (CN X)
- right accessory nerve (CN XI)
- right hypoglossal nerve (CN XII)
- left olfactory nerve (CN I)
- left optic nerve (CN II)
- left oculomotor nerve (CN III)
- left trochlear nerve (CN IV)
- left trigeminal nerve (CN V)
- left abducent nerve (CN VI)
- left facial nerve (CN VII)
- left intermediate nerve (CN VII b)
- left vestibulocochlear nerve (CN VIII)
- left glossopharyngeal nerve (CN IX)
- left vagal nerve (CN X)
- left accessory nerve (CN XI)
- left hypoglossal nerve (CN XII)
spinal nerves
nerve plexuses and intercostal nerves
- cervical plexus r/l
- lesser occipital nerve r/l
- greater auricular nerve r/l
- transverse cervical nerve r/l
- supraclavicular nerve r/l
- ansa cervicalis r/l
- phrenic nerve r/l
- segmental nerve branches
- right first cervical nerve
- right second cervical nerve
- right third cervical nerve
- right fourth cervical nerve
- left first cervical nerve
- left second cervical nerve
- left third cervical nerve
- left fourth cervical nerve
- brachial plexus r/l
- dorsal scapular nerve r/l
- suprascapular nerve r/l
- nerve to subclavius r/l
- lateral pectoral nerve r/l
- musculocutaneus nerve r/l
- axillary nerve r/l
- median nerve r/l
- ulnar nerve r/l
- radial nerve r/l
- lower subscapular nerve r/l
- thoracodorsal nerve r/l
- medial pectoral nerve r/l
- upper subscapular nerve r/l
- long thoracic nerve r/l
- intercostal nerves
- right first intercostal nerve
- right second intercostal nerve
- right third intercostal nerve
- right fourth intercostal nerve
- right fifth intercostal nerve
- right sixth intercostal nerve
- right seventh intercostal nerve
- right eighth intercostal nerve
- right ninth intercostal nerve
- right tenth intercostal nerve
- right eleventh intercostal nerve
- left first intercostal nerve
- left second intercostal nerve
- left third intercostal nerve
- left fourth intercostal nerve
- left fifth intercostal nerve
- left sixth intercostal nerve
- left seventh intercostal nerve
- left eighth intercostal nerve
- left ninth intercostal nerve
- left tenth intercostal nerve
- left eleventh intercostal nerve
- lumbosacral plexus
- iliohypogastric nerve r/l
- ilioinguinal nerve r/l
- genitofemoral nerve r/l
- lateral cutaneous femoral nerve r/l
- femoral nerve r/l
- obturator nerve r/l
- accessory obturator nerve r/l
- sciatic nerve r/l
- common fibular nerve r/l
- tibial nerve r/l
- pudendal nerve r/l
- anococcigeal nerves r/l
circulatory system
systemic arterial system
- aorta
- right coronary artery
- left coronary artery
- aortic arch
- right brachiocephalic trunk
- right subclavian artery
- right vertebral artery
- anterior spinal artery
- posterior inferior cerebellar artery
- basilar artery
- anterior inferior cerebellar artery
- pontine arteries
- superior cerebellar artery
- posterior cerebellar artery
- internal thoracic artery
- thyrocervical trunk
- costocervical trunk
- dorsal scapular artery
- axillary artery
- brachial artery
- right vertebral artery
- right common carotid artery
- right external carotid artery
- right internal carotid artery
- right opthalmic artery
- right anterior cerebral artery
- anterior communicating artery
- right middle cerebral artery
- right posterior communicating artery
- right subclavian artery
- left common carotid artery
- left external carotid artery
- left internal carotid artery
- see right internal carotid artery
- left subclavian artery
- see right subclavian artery
- right brachiocephalic trunk
- descending thoracic aorta
- bronchial arteries
- esophageal arteries
- posterior intercostal arteries r/l
- abdominal aorta
- inferior phrenic artery
- celiac trunk
- superior mesenteric artery
- middle suprarenal artery
- renal artery r/l
- gonadal artery r/l
- lumbar artery r/l
- inferior mesenteric artery
- median sacral artery
- right common iliac artery
- right external iliac artery
- inferior epigastric artery
- deep circumflex iliac artery
- femoral artery
- right internal iliac artery
- right iliolumbar artery
- right lateral sacral arteries
- right superior gluteal artery
- right obturator artery
- right inferior gluteal artery
- right umbilical artery
- right uterine/deferential artery
- right inferior vesical artery
- right middle rectal artery
- right internal pudendal artery
- right external iliac artery
- left common iliac artery
- left external iliac artery
- left internal iliac artery
systemic venous system
- superior vena cava
- inferior vena cava
- azygos vein
- hemyazygos vein
- portal vein
pulmonary arterial system
- right pulmonary artery
- left pulmonary artery
pulmonary venous system
- right superior pulmonary vein
- right inferior pulmonary vein
- left superior pulmonary vein
- left inferior pulmonary vein
lymphatic system
lymphatic ducts
- right lymphatic duct
- thoracic duct
lymph node groups
- cervical lymph nodes
- supraclavicular lymph nodes
- occipital lymph nodes
- pre-auricular lymph nodes
- infraclavicular lymph nodes
- axillary lymph nodes
- pectoral lymph nodes
- epitrochlear/brachial lymph nodes
- mediastinal lymph nodes
- mesenteric lymph nodes
- para-aortal lymph nodes
- iliac lymph nodes
- inguinal lymph nodes
- femoral lymph nodes
- popliteal lymph nodes
material
- air
- liquid
biological material
- blood
- cerebro-spinal fluid
- urine
- feces
tissue
- gray matter
- white matter
- bone
- cartilage
- fat
- connective tissue
pathology
- tumor
- edema
- bleeding
- necrosis
- clot
- embolism
foreign objects
- surgical needle
- probe
segmentation regions
- background
- unsegmented region
- user defined regions
- region 1
- region 2
- region 3
- region 4
- region 5
- region 6
- region 7
- region 8
- region 9
- region 10
- region 12
- region 13
- region 14
- region 15
- region 16
