Modules:VMTKLevelSetSegmentation

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Module Name

VMTKLevelSetSegmentation

Main GUI

Vessels of an arm segmented

A cerebral aneurysm segmented

A coronary tree segmented

General Information

Module Type & Category

Type: Interactive Scripted Module

Category: Segmentation, Extension

Authors, Collaborators & Contact

• Author: Daniel Haehn, University of Heidelberg
• Supervisor: Luca Antiga, Mario Negri Institute
• Contact: Daniel Haehn, haehn@bwh.harvard.edu

Module Description

A flow chart of the level-set segmentation process

This module provides the level-set segmentation process of the Vascular Modeling Toolkit (http://www.vmtk.org) in 3D Slicer.

Segmentation using level sets consists of an initialization and an evolution step. The initialization step involves the description of a starting model within a region of interest. In the evolution step this initial deformable model then gets inflated to match the contours of the targeted volume.

Usage

Examples, Use Cases & Tutorials

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• Link to examples of the module's use
• Link to any existing tutorials

Quick Tour of Features and Use

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• Input panel:
• Parameters panel:
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Development

Dependencies

This module depends on the VMTK libraries which are provided in the VmtkSlicerModule. Therefore the VmtkSlicerModule has to be installed before the VMTKLevelSetSegmentation module can be used.

Known bugs

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Usability issues

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Source code & documentation

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Links to documentation generated by doxygen.

More Information

Acknowledgment

This work was funded by a grant of the Thomas­-Gessmann Foundation part of the Founder Federation for German Science.

References

Publications related to this module go here. Links to pdfs would be useful.