Documentation/4.8

For the latest Slicer documentation, visit the read-the-docs.

Nightly 4.10 4.8 4.6 4.5 4.4 4.3 4.2 4.1 4.0 3.6 3.5 3.4 3.2 ALL VERSIONS

Where to start ? Getting started Quick overview about Slicer Training pages Information on how to use Slicer 4.8 FAQ Set of common questions/answers Discussion Forum The most effective way to get help from the community How to Report a problem / Create a feature request  NEW Slicer Application Installation / Uninstallation Main Application User-Interface Application Settings Extensions Manager Mouse Buttons, "Hot-keys" and Keyboard Shortcuts Recommended Computer Configurations Loading or Saving data and listing of supported data formats. Slicer Lookup Tables Setting up and using stereoscopic viewing QtTesting - Easy way to record and play macros		Modules   Annotations Data Data Store DICOM Editor Markups Models Scene Views Segmentations Segment Editor Transforms View Controllers Volume Rendering Volumes Welcome to Slicer Modules by category Modules by name Modules by contributing organization Modules by contributing individual Modules by type Modules by extension Extensions by category Extensions by name Extensions by contributing organization Extensions by contributing individual		Developers Corner Information for Software Developers  UPDATED Source code, contribute patch, develop modules Miscellaneous Documentation guidelines Slicer user documentation principle and guidelines Visual blog Set of screenshots showing Slicer in action. Release Notes Platform specific issues and considerations Announcements & Acknowledgments Registration Library Real-life example cases of using the Slicer registration tools, incl. datasets and step-by-step instructions to follow and try yourself. Documentation in other languages Español

Extensions by name Extensions by name 83 extensions: ABC AirwaySegmentation AnomalousFilters BoneTextureExtension Cardiac_MRI_Toolkit CardiacAgatstonMeasures CarreraSlice CBC_3D_I2MConversion ChangeTracker Chest_Imaging_Platform CleaverExtension CMFreg CornerAnnotation CurveMaker DatabaseInteractor DCMQI DebuggingTools DeepInfer DeveloperToolsForExtensions DiceComputation DSCMRIAnalysis EasyClip FastGrowCutEffect FilmDosimetryAnalysis GelDosimetryAnalysis GraphCutSegment GyroGuide IASEM iGyne ImageMaker IntensitySegmenter LAScarSegmenter LongitudinalPETCT MarginCalculator MeshToLabelMap MarkupsToModel MeshStatistics MeshToLabelMap ModelToModelDistance mpReview MultiLevelRegistration NeedleFinder OpenCAD OpenCVExample PBNRR PercutaneousApproachAnalysis PerkTutor PET-IndiC PETDICOMExtension PETLiverUptakeMeasurement PetSpectAnalysis PETTumorSegmentation PickAndPaintExtension PkModeling Q3DC QuantitativeReporting Radiomics ResampleDTIlogEuclidean ResectionPlanner ROBEXBrainExtraction ScatteredTransform Scoliosis SegmentationWizard SegmentEditorExtraEffects SegmentRegistration Sequences ShapeQuantifier ShapeVariationAnalyzer SkullStripper SlicerAstro SlicerDMRI SlicerElastix SlicerHeart SlicerIGT SlicerITKUltrasound SlicerOpenCV SlicerPathology SlicerProstate SlicerRT SlicerSequenceRegistration SoundControl SlicerToKiwiExporter SliceTracker Wasp SobolevSegmenter SPHARM-PDM SwissSkullStripper T1Mapping TCIABrowser TrackerStabilizer UKFTractography VirtualFractureReconstruction VMTK VolumeClip WindowLevelEffect XNATSlicer

Modules by category Converters CropVolume (loadable) OrientScalarVolume (cli) VectorToScalarVolume (scripted) CreateDICOMSeries (cli) Developer Tools Cameras (loadable) ExecutionModelTour (cli) ExtensionWizard (scripted) EventBroker DoubleArrays (loadable) DICOM Plugins DICOMParametricMapPlugin DicomUltrasoundPlugin DICOMSegmentationPlugin DICOMSlicerDataBundlePlugin DICOMTID1500Plugin DICOMPETSUVPlugin DICOMScalarVolumePlugin DICOMDiffusionVolumePlugin DICOMLongitudinalPETCTPlugin DicomSroImportPlugin DICOMRWVMPlugin DicomRtImportExportPlugin MultiVolumeImporterPlugin Diffusion DMRIInstall (scripted) Diffusion Data Conversion DWIConvert (cli) Diffusion Weighted Images BRAINSDWICleanup (cli) Import and Export DWIConvert (cli) Utilities BRAINSDWICleanup (cli) ResampleDTIVolume (cli) ResampleScalarVectorDWIVolume (cli) Endoscopy Endoscopy (scripted) Filter IslandRemoval (cli) Filtering N4ITKBiasFieldCorrection (cli) ImageLabelCombine (cli) VotingBinaryHoleFillingImageFilter (cli) CheckerBoardFilter (cli) ExtractSkeleton (cli) SimpleFilters (scripted) ThresholdScalarVolume (cli) HistogramMatching (cli) Arithmetic MultiplyScalarVolumes (cli) AddScalarVolumes (cli) MaskScalarVolume (cli) SubtractScalarVolumes (cli) CastScalarVolume (cli) Denoising CurvatureAnisotropicDiffusion (cli) GradientAnisotropicDiffusion (cli) MedianImageFilter (cli) GaussianBlurImageFilter (cli) Morphology GrayscaleFillHoleImageFilter (cli) GrayscaleGrindPeakImageFilter (cli) IGT OpenIGTLinkIF (loadable) Informatics SEG2NRRD (cli) Tables (loadable) Data (loadable) DumpSEGFrame (cli) Terminologies (loadable) Units (loadable) DICOM (scripted) SampleData (scripted) Colors (loadable) Annotations (loadable) Markups (loadable) SubjectHierarchy (loadable) Converters EncodeSEG (cli) Legacy Converters BSplineToDeformationField (cli) Filtering OtsuThresholdImageFilter (cli) ResampleScalarVolume (cli) Registration TestGridTransformRegistration (cli) ExpertAutomatedRegistration (cli) MultiVolume Support MultiVolumeImporter (scripted) MultiVolumeExplorer (loadable) Quantification PETStandardUptakeValueComputation (cli) SegmentStatistics (scripted) LabelStatistics (scripted) BRAINSLabelStats (cli) DataProbe (scripted) Registration Introduction to Registration (by Dominik Meier) Transforms (loadable) BRAINSResize (cli) PerformMetricTest (cli) LandmarkRegistration (scripted) BRAINSResample (cli) BRAINSFit (cli) Specialized ACPCTransform (cli) FiducialRegistration (cli) BRAINSDemonWarp (cli) Reformat (loadable) VBRAINSDemonWarp (cli) Segmentation EMSegmentQuick (loadable) SegmentEditor (scripted) Editor (scripted) SimpleRegionGrowingSegmentation (cli) EMSegment (loadable) Specialized BRAINSROIAuto (cli) RobustStatisticsSegmenter (cli) EMSegmentCommandLine (cli) Surface Models SurfaceToolbox (scripted) GrayscaleModelMaker (cli) ModelMaker (cli) ModelToLabelMap (cli) MergeModels (cli) LabelMapSmoothing (cli) ProbeVolumeWithModel (cli) Utilities ScreenCapture (scripted) DataStore (loadable) DICOMPatcher (scripted) BRAINSStripRotation (cli) EMSegmentTransformToNewFormat (cli) BRAINS BRAINSTransformConvert (cli) Wizards CompareVolumes (scripted)