Difference between revisions of "Documentation/4.3/Extensions/OpenCAD"
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{{documentation/{{documentation/version}}/module-section|Use Cases}} | {{documentation/{{documentation/version}}/module-section|Use Cases}} | ||
The {{documentation/modulename}} module could be used in any situation requiring stable tracking data and not requiring a "real-time" information. Indeed, applying a filter on raw data will induce a delay (depending on choosen parameters) on the filtered position/orientation. | The {{documentation/modulename}} module could be used in any situation requiring stable tracking data and not requiring a "real-time" information. Indeed, applying a filter on raw data will induce a delay (depending on choosen parameters) on the filtered position/orientation. | ||
| − | An example could be to drive Slicer's virtual camera. Having some noise on the transformation driving the camera will cause the camera to "shake" which could be really distracting and uncomfortable to look at. By filtering this raw data, camera motion is smoothed. | + | An example could be to drive Slicer's virtual camera. Having some noise on the transformation driving the camera will cause the camera to "shake" which could be really distracting and uncomfortable to look at. By filtering this raw data, camera motion is smoothed. --> |
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{{documentation/{{documentation/version}}/module-section|Data sets}} | {{documentation/{{documentation/version}}/module-section|Data sets}} | ||
| − | [[media:Breast- | + | [[media:Breast-data1.zip|Breast DCE-MRI Data Set 1 (zip file containing the nrrd volumes for the OpenCAD tutorial)]] |
| − | [[media:Breast- | + | [[media:Breast-data2.zip|Breast DCE-MRI Data Set 2 (zip file containing additional test set of nrrd volumes)]] |
| − | [[media: | + | [[media:Liver-data1.zip|Liver DCE-MRI Data Set 1 (zip file containing additional test set of nrrd volumes)]] |
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{{documentation/{{documentation/version}}/module-section|Panels and their use}} | {{documentation/{{documentation/version}}/module-section|Panels and their use}} | ||
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| − | The GUI of the {{documentation/modulename}} module contains 4 | + | The GUI of the {{documentation/modulename}} module contains 4 sections: |
| − | * | + | * Select DCE-MRI Volumes for Segmentation |
| − | * Output | + | * Select or Create Output OpenCAD Label Map |
| − | * | + | * Set Advanced Segmentation Parameters |
| − | * | + | * OpenCAD Label Statistics |
| + | * Interactive Charting Settings | ||
|} | |} | ||
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| − | |[[Image: | + | |[[Image:Slicer-OpenCAD-GUI.png|thumb|400px|{{documentation/modulename}} GUI ]] |
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{{documentation/{{documentation/version}}/module-parametersdescription}} | {{documentation/{{documentation/version}}/module-parametersdescription}} | ||
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{{documentation/{{documentation/version}}/module-section|Information for Developers}} | {{documentation/{{documentation/version}}/module-section|Information for Developers}} | ||
{{documentation/{{documentation/version}}/module-developerinfo}} | {{documentation/{{documentation/version}}/module-developerinfo}} | ||
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| + | Source code: https://github.com/vnarayan13/Slicer-OpenCAD | ||
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{{documentation/{{documentation/version}}/module-footer}} | {{documentation/{{documentation/version}}/module-footer}} | ||
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Revision as of 16:59, 25 April 2014
Home < Documentation < 4.3 < Extensions < OpenCAD
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For the latest Slicer documentation, visit the read-the-docs. |
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Introduction and Acknowledgements
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This work is supported by NA-MIC, NCIGT, and the Slicer Community. | |||||||
This project is supported by... |
Module Description
OpenCAD module allows to output a filtered transform node based on an tracker input (transform node). Tracking sensors are particularly usefull to track surgical tools, robots, patient motion, etc... . However, data imported in 3D Slicer from these devices are often noisy. To reduce the noise and smoothly control objects, such as 3D Slicer camera, the OpenCAD module will apply a low-pass filter on input data. The cut-off frequency (i.e. the smoothing parameter) is adjustable by the user. It is important to notice that filters induce delay, and the smoother the motion is, the bigger the delay between the raw data and the filtered position will be.
Tutorials
Data sets
Breast DCE-MRI Data Set 1 (zip file containing the nrrd volumes for the OpenCAD tutorial)
Breast DCE-MRI Data Set 2 (zip file containing additional test set of nrrd volumes)
Liver DCE-MRI Data Set 1 (zip file containing additional test set of nrrd volumes)
Panels and their use
The GUI of the OpenCAD module contains 4 sections:- Select DCE-MRI Volumes for Segmentation
- Select or Create Output OpenCAD Label Map
- Set Advanced Segmentation Parameters
- OpenCAD Label Statistics
- Interactive Charting Settings
Similar Modules
N/A
References
N/A
Information for Developers
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Section under construction. |
Source code: https://github.com/vnarayan13/Slicer-OpenCAD
