Difference between revisions of "Documentation/Nightly/Extensions/CardiacMRIToolkit"
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Authors: Alan Morris, Salma Bengali, CARMA Center, University of Utah<br> | Authors: Alan Morris, Salma Bengali, CARMA Center, University of Utah<br> | ||
Contributors: Greg Gardner, Josh Cates, Rob MacLeod, Eugene Kholmovski, CARMA Center, University of Utah<br> | Contributors: Greg Gardner, Josh Cates, Rob MacLeod, Eugene Kholmovski, CARMA Center, University of Utah<br> | ||
− | Contacts: Alan Morris | + | Contacts: Alan Morris: <email>alan.morris@carma.utah.edu</email>, Salma Bengali: <email>salma.bengali@carma.utah.edu</email><br> |
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− | {{documentation/{{documentation/version}}/ | + | {{documentation/{{documentation/version}}/extension-section|Extension Description}} |
− | + | The CARMA extension consists of several modules that can be used in the analysis of cardiac LGE-MRI images for the purpose of studying cardiac arrhythmia. | |
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− | {{documentation/{{documentation/version}}/ | + | {{documentation/{{documentation/version}}/extension-section|Modules}} |
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− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleInhomogeneity|Automatic Cardiac MRI Inhomogeneity Correction Filter]] | |
− | {{documentation/{{documentation/version}}/ | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleAutoScar|Automatic Left Atrial (Post-ablation) Scar Detection]] |
− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleCardiacRegistration|Cardiac MRI Registration]] | |
− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleCardiacRegistrationBRAINSFit|Cardiac MRI Registration Using BRAINSFit]] | |
− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModulePVAntrumCut|PV Antrum Cut Filter]] | |
− | {{documentation/{{documentation/version}}/ | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleAxialDilate|2D Axial Dilate Filter]] |
− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleIsolatedConnected|Isolated Connected Image Filter]] | |
− | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleConnectedThreshold|Connected Threshold Image Filter]] | |
− | {{documentation/{{documentation/version}}/ | + | *[[Documentation/{{documentation/version}}/Modules/SlicerModuleAutomatedLASegmentation|Automated Graph Cut LA Segmentation]] |
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− | {{documentation/{{documentation/version}}/ | + | {{documentation/{{documentation/version}}/extension-section|Use Cases}} |
− | + | * Automatic scar detection from cardiac LGE-MRI | |
+ | * Segmentation of heart | ||
+ | * Cardiac LGE-MRI image registration | ||
+ | * Various operations on segmentation masks | ||
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− | {{documentation/{{documentation/version}}/ | + | {{documentation/{{documentation/version}}/extension-section|Tutorials}} |
− | + | Tutorials for the modules can be found on their respective pages. | |
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− | {{documentation/{{documentation/version}}/ | + | {{documentation/{{documentation/version}}/extension-section|Information for Developers}} |
{{documentation/{{documentation/version}}/module-developerinfo}} | {{documentation/{{documentation/version}}/module-developerinfo}} | ||
+ | The source code for this extension can be found at the [https://github.com/carma-center/carma_slicer_extension/ CARMA GitHub repository]. | ||
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Revision as of 18:05, 20 February 2013
Home < Documentation < Nightly < Extensions < CardiacMRIToolkitIntroduction and Acknowledgements
This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the NA-MIC website. | |
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Extension Description
The CARMA extension consists of several modules that can be used in the analysis of cardiac LGE-MRI images for the purpose of studying cardiac arrhythmia.
Modules
- Automatic Cardiac MRI Inhomogeneity Correction Filter
- Automatic Left Atrial (Post-ablation) Scar Detection
- Cardiac MRI Registration
- Cardiac MRI Registration Using BRAINSFit
- PV Antrum Cut Filter
- 2D Axial Dilate Filter
- Isolated Connected Image Filter
- Connected Threshold Image Filter
- Automated Graph Cut LA Segmentation
Use Cases
- Automatic scar detection from cardiac LGE-MRI
- Segmentation of heart
- Cardiac LGE-MRI image registration
- Various operations on segmentation masks
Tutorials
Tutorials for the modules can be found on their respective pages.
Information for Developers
Section under construction. |
The source code for this extension can be found at the CARMA GitHub repository.