Difference between revisions of "User:Pieper"
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| + | == Slicer4 Local extension index build == | ||
| + | |||
| + | <pre> | ||
| + | SLICER=d:/pieper/Slicer | ||
| + | SSUPER=d:/pieper/s | ||
| + | EXT=d:/pieper/Extensions/ExtensionsIndex-local | ||
| + | BUILDTYPE=Debug | ||
| + | |||
| + | SBUILD=${SSUPER}/Slicer-build | ||
| + | EBUILD=${EXT}-build | ||
| + | |||
| + | cd ${EBUILD} | ||
| + | cmake -DSlicer_DIR:PATH=${SBUILD} -DSlicer_EXTENSION_DESCRIPTION_DIR:PATH=${EXT} -DCMAKE_BUILD_TYPE:STRING=${BUILDTYPE} ${SLICER}/Extensions/CMake | ||
| + | </pre> | ||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | == GLX Enabled VNC on Unbuntu (tested on 13.04) == | ||
| + | |||
| + | See [https://www.xpra.org] for more info. | ||
| + | |||
| + | === Remote Host=== | ||
| + | |||
| + | ====Install X.org Dummy Driver ==== | ||
| + | |||
| + | sudo apt-get install xserver-xorg-video-dummy | ||
| + | |||
| + | ====Install x11vnc==== | ||
| + | |||
| + | sudo apt-get install x11vnc | ||
| + | |||
| + | Set up a vncpassword if needed with vncpasswd (available in package vnc4-common). | ||
| + | |||
| + | ====Run Xvfb and start and xterm==== | ||
| + | |||
| + | nohup Xorg +extension GLX +extension RANDR +extension RENDER -logfile xorg-1.log -config xorg.conf :1 & | ||
| + | |||
| + | and then (give the X server a second to start) | ||
| + | |||
| + | xterm -display :1 & | ||
| + | |||
| + | '''Note:''' each user needs a distinct display number (replace :1 in this example with your number). | ||
| + | |||
| + | ====Run x11vnc==== | ||
| + | |||
| + | nohup x11vnc -display :1 -usepw -N -localhost -forever & | ||
| + | |||
| + | ===On local host=== | ||
| + | ==== Set up ssh tunnel ==== | ||
| + | |||
| + | ssh -C -L 5900:localhost:5901 <remotehost> | ||
| + | |||
| + | ==== Connect to server ==== | ||
| + | |||
| + | vncviewer localhost:0 | ||
| + | |||
| + | Now you may want to run gnome-session or startkde. Run glxgears or glxinfo to confirm GLX setup. | ||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
== GLX Enabled VNC on Unbuntu (tested on 8.10) == | == GLX Enabled VNC on Unbuntu (tested on 8.10) == | ||
| Line 17: | Line 86: | ||
nohup Xvfb :1 -screen 0 1280x1024x16 & | nohup Xvfb :1 -screen 0 1280x1024x16 & | ||
| − | + | ||
| + | and then (give the X server a second to start) | ||
| + | |||
| + | xterm -display :1 & | ||
'''Note:''' each user needs a distinct display number (replace :1 in this example with your number). | '''Note:''' each user needs a distinct display number (replace :1 in this example with your number). | ||
| Line 35: | Line 107: | ||
Now you may want to run gnome-session or startkde. Run glxgears or glxinfo to confirm GLX setup. | Now you may want to run gnome-session or startkde. Run glxgears or glxinfo to confirm GLX setup. | ||
| + | |||
| + | == on boggs == | ||
| + | <pre> | ||
| + | nohup Xvfb :20 -screen 0 1900x1200x16 & | ||
| + | nohup /usr/local/bin/x11vnc -display :20 -usepw -N -forever & | ||
| + | xterm -d :20 | ||
| + | </pre> | ||
| + | |||
| + | ==Route localhost imap to remote server== | ||
| + | |||
| + | sudo ssh -C -L 993:localhost:993 user@imapserver | ||
| + | |||
| + | = Acknowledgments = | ||
| + | |||
| + | |||
| + | “This project was supported by the National Center for Research | ||
| + | Resources and the National Institute of Biomedical Imaging and | ||
| + | Bioengineering of the National Institutes of Health through Grant Numbers | ||
| + | P41-RR-013218 and P41-EB-015902.” | ||
| + | |||
| + | "This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on the National Centers for Biomedical Computing can be obtained from http://nihroadmap.nih.gov/bioinformatics." | ||
Latest revision as of 17:15, 6 September 2013
Contents
Slicer4 Local extension index build
SLICER=d:/pieper/Slicer
SSUPER=d:/pieper/s
EXT=d:/pieper/Extensions/ExtensionsIndex-local
BUILDTYPE=Debug
SBUILD=${SSUPER}/Slicer-build
EBUILD=${EXT}-build
cd ${EBUILD}
cmake -DSlicer_DIR:PATH=${SBUILD} -DSlicer_EXTENSION_DESCRIPTION_DIR:PATH=${EXT} -DCMAKE_BUILD_TYPE:STRING=${BUILDTYPE} ${SLICER}/Extensions/CMake
GLX Enabled VNC on Unbuntu (tested on 13.04)
See [1] for more info.
Remote Host
Install X.org Dummy Driver
sudo apt-get install xserver-xorg-video-dummy
Install x11vnc
sudo apt-get install x11vnc
Set up a vncpassword if needed with vncpasswd (available in package vnc4-common).
Run Xvfb and start and xterm
nohup Xorg +extension GLX +extension RANDR +extension RENDER -logfile xorg-1.log -config xorg.conf :1 &
and then (give the X server a second to start)
xterm -display :1 &
Note: each user needs a distinct display number (replace :1 in this example with your number).
Run x11vnc
nohup x11vnc -display :1 -usepw -N -localhost -forever &
On local host
Set up ssh tunnel
ssh -C -L 5900:localhost:5901 <remotehost>
Connect to server
vncviewer localhost:0
Now you may want to run gnome-session or startkde. Run glxgears or glxinfo to confirm GLX setup.
GLX Enabled VNC on Unbuntu (tested on 8.10)
Remote Host
Install Xvfb
sudo apt-get install xvfb
Install x11vnc
sudo apt-get install x11vnc
Set up a vncpassword if needed with vncpasswd (available in package vnc4-common).
Run Xvfb and start and xterm
nohup Xvfb :1 -screen 0 1280x1024x16 &
and then (give the X server a second to start)
xterm -display :1 &
Note: each user needs a distinct display number (replace :1 in this example with your number).
Run x11vnc
nohup x11vnc -display :1 -usepw -N -localhost -forever &
On local host
Set up ssh tunnel
ssh -C -L 5900:localhost:5901 <remotehost>
Connect to server
vncviewer localhost:0
Now you may want to run gnome-session or startkde. Run glxgears or glxinfo to confirm GLX setup.
on boggs
nohup Xvfb :20 -screen 0 1900x1200x16 & nohup /usr/local/bin/x11vnc -display :20 -usepw -N -forever & xterm -d :20
Route localhost imap to remote server
sudo ssh -C -L 993:localhost:993 user@imapserver
Acknowledgments
“This project was supported by the National Center for Research Resources and the National Institute of Biomedical Imaging and Bioengineering of the National Institutes of Health through Grant Numbers P41-RR-013218 and P41-EB-015902.”
"This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on the National Centers for Biomedical Computing can be obtained from http://nihroadmap.nih.gov/bioinformatics."
