Difference between revisions of "Documentation/Nightly/2016-User-Manual-Discussion"

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3D Slicer
 
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----
 
----
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<span style="color: #555555; font-size: 18px; font-weight: bold;">3D Slicer</span>
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* Analysis and visualization of medical images
 
* Analysis and visualization of medical images
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<span style="color: #555555; font-size: 18px; font-weight: bold;">Highlights</span>
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* Designed for biomedical research
 
* Designed for biomedical research
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* Multi-modality imaging: MRI, CT, US, nuclear medicine, and microscopy.
 
* Multi-modality imaging: MRI, CT, US, nuclear medicine, and microscopy.
 
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----
 
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* [[ New_users|Getting started]]
 
* [[ New_users|Getting started]]
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* [[ Documentation/{{documentation/version}}/Training|Learn how to use 3D Slicer]]
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* [[ Documentation/{{documentation/version}}/Training|Self-Training: Tutorials and sample data]]
 
* [[FAQ|Frequently asked questions]]
 
* [[FAQ|Frequently asked questions]]
 
* [http://slicer-users.65878.n3.nabble.com/ Search users mailing list] / [http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users Sign-up]
 
* [http://slicer-users.65878.n3.nabble.com/ Search users mailing list] / [http://massmail.spl.harvard.edu/mailman/listinfo/slicer-users Sign-up]
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* [[Documentation/{{documentation/version}}/Report_a_problem|Report a problem or request a feature ]]
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* How to [[CitingSlicer|cite 3D Slicer and individual 3D Slicer Modules]]  
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* How to [[CitingSlicer|Cite 3D Slicer and individual 3D Slicer Modules]]  
 
 
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* [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#Layouts|Layouts]], [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#3D_Viewer|3D Viewers]], and [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#Slice_Viewers|Slice Viewers]]
 
* [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#Layouts|Layouts]], [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#3D_Viewer|3D Viewers]], and [[Documentation/{{documentation/version}}/SlicerApplication/MainApplicationGUI#Slice_Viewers|Slice Viewers]]
 
* [[Documentation/{{documentation/version}}/SlicerApplication/MouseandKeyboardShortcuts|Mouse Buttons, "Hot-keys" and Keyboard Shortcuts]]
 
* [[Documentation/{{documentation/version}}/SlicerApplication/MouseandKeyboardShortcuts|Mouse Buttons, "Hot-keys" and Keyboard Shortcuts]]
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* Where to modify [[Documentation/{{documentation/version}}/SlicerApplication/ApplicationSettings#Overview|settings]] and where they are [[stored]] (refers to the Edit/Appplication Settings pop up panel)
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* Where to modify [[Documentation/{{documentation/version}}/SlicerApplication/ApplicationSettings#Overview|settings]]
 
* [[Documentation/{{documentation/version}}/SlicerApplication/HardwareConfiguration|Hardware requirements]]
 
* [[Documentation/{{documentation/version}}/SlicerApplication/HardwareConfiguration|Hardware requirements]]
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* [[Link to portal page about loading data|Loading]], [[Saving data]] and [[listing of supported data formats]].
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*[[Documentation/{{documentation/version}}/SlicerApplication/LoadingData | Loading]] or [[Documentation/{{documentation/version}}/SlicerApplication/SavingData | Saving]] data and listing of [[Documentation/{{documentation/version}}/SlicerApplication/SupportedDataFormat | supported data formats]].
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<!-- : scenes, DICOM, volumes, models, fiducials, transforms, etc. -->
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----
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<span style="color: #555555; font-size: 18px; font-weight: bold;">Advanced Topics</span>
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----
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* [http://slicerdmri.github.io/  Interactive tractography using diffusion MRI data]
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* [[Documentation/{{documentation/version}}/Extensions/SlicerIGT | Slicer IGT]]
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* [[Documentation/{{documentation/version}}/Extensions/SlicerRT | Slicer RT]]
  
  
 
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----
 
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<span style="color: #555555; font-size: 18px; font-weight: bold;">Core Functions</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Core Functions</span>
 
----
 
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|  
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| [[image:Load-2016-08-11.png|100px|link=Documentation/Nightly/SlicerApplication/LoadingData| To add data, just drag and drop]]
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| Data IO and Organization
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| [[image:Save-Icon-2016-08-11.png|100px|link=Documentation/Nightly/SlicerApplication/SavingData| To save data, select the save icon]]
 
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| [[Image:2016-07-03-Interactive-Editor-Icon.png|60 px| link=Link to Editor module |Interactive segmentation]]   
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| [[Image:2016-07-03-Interactive-Editor-Icon.png|100 px| link=Link to Editor module |Interactive segmentation]]   
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| Interactive and Automated Segmentation
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| [[image:Editor-panel.png|100px|link=https://www.youtube.com/watch?v=MKLWzD0PiIc| Interactive Segmentation (at 14 minutes)]]
 
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| [[Image:2016-07-03-Transforms-Module-Icon.png|60 px| Link= Link to Transforms module |Interactive]]
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| [[Image:2016-07-03-Transforms-Module-Icon.png|100 px|link=Documentation/Nightly/Modules/Transforms|Interactive registration]]
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| Interactive and Automated Registration
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| [[Image:Grid3dVolume.png|100px|link=https://www.youtube.com/watch?v=kZUAfR0mqqI| Demo of the transforms display feature]]
 
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|-
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| [[Image:SlicerRegistrationLibrary_Ad.png|80px|link=Documentation/Nightly/Registration/RegistrationLibrary]]
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| [[Image:SlicerRegistrationLibrary_Ad.png|100px|link=Documentation/Nightly/Registration/RegistrationLibrary|Registration library]]
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| Registration library
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| [[Image:VolumeRendering-CTA-2011.png|100 px|link=Documentation/Nightly/Modules/VolumeRendering | Volume rendering]]
 
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| [[Image:2016-07-03-Volume-Rendering-Icon.png|60 px| Link= Link to Volume rendering module | Volume rendering]]  
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| [[Image:Fiducial-2016-08-11.png|100px|link=Documentation/Nightly/Modules/Markups| Fiducials]]  
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| Volume rendering
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| [[Image:Ruler-2016-08-11.png|100px|link=Documentation/Nightly/Modules/Annotations| Linear Measurements]]
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| [[Link to the fiducials page | Fiducials]] and [[link to the linear measurements page| Linear Measurements]]
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| Measurements and Quantification
 
 
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----
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* [[search box right here|Search for a module in this version of Slicer (including extensions)]]
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<span style="color: #555555; font-size: 18px; font-weight: bold;">Advanced Topics</span>
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* Listing in two columns:
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----
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** Alphabetic list of modules
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* [[Link to the proper page | Interactive tractography of diffusion MRI data]]  
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** Alphabetic list of extensions
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* [[Documentation/{{documentation/version}}/Extensions/SlicerIGT | Slicer IGT]]
 
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* [[Documentation/{{documentation/version}}/Extensions/SlicerRT | Slicer RT]]
 
  
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----
 
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<span style="color: #555555; font-size: 18px; font-weight: bold;">Miscellaneous</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Miscellaneous</span>
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{{:Documentation/{{documentation/version}}/Lang/ES}}  
 
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* [[search box right here|Search for a module in this version of Slicer (including extensions)]]
 
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* Listing in two columns:
 
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** Alphabetic list of modules
 
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** Alphabetic list of extensions
 

Latest revision as of 14:20, 11 August 2016

Home < Documentation < Nightly < 2016-User-Manual-Discussion


3D Slicer

  • Analysis and visualization of medical images
  • Image guided therapy research, device interfaces.
  • Extensible, free, open source. See here for the license

  • Designed for biomedical research
  • Multi organ capability: from head to toe.
  • Multi-modality imaging: MRI, CT, US, nuclear medicine, and microscopy.

Where to start ?

The Basics

Advanced Topics


Core Functions

To add data, just drag and drop To save data, select the save icon
Interactive segmentation Interactive Segmentation (at 14 minutes)
Interactive registration Demo of the transforms display feature
Registration library Volume rendering
Fiducials Linear Measurements

Miscellaneous


Documentation in other languages

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