Difference between revisions of "Documentation/Nightly/Modules/ApplyRegistrationMatrix"

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{|
 
{|
|[[Image:DownsizeInterface.png|thumb|280px|User Interface]]
+
|[[Image:ApplyMatrixInterfaceNew.png|thumb|280px|User Interface]]
|[[Image:InputVolumeBadResolutionCMFreg.png|thumb|280px|Input Scan Bad Voxel Based Resolution]]
 
|[[Image:OutputScanDownsizedCMFreg.png|thumb|280px|Output Scan Downsized]]
 
 
|}
 
|}
 
== General Information ==
 
== General Information ==
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Type: Extension
 
Type: Extension
  
Category: CBCT Applying Scan Registration matrix
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Category: Volume Applying Registration matrix
  
  
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===Module Description===
 
===Module Description===
 
* <span style="color:blue">'''''Input Volumes and Matrix'''''</span>:  
 
* <span style="color:blue">'''''Input Volumes and Matrix'''''</span>:  
** <span style="color:green">'''Input Volume'''</span> [<span style="color:orange">index 0</span>] : Scan which the registration matrix will be applied to.
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** <span style="color:green">'''Input Volume'''</span> [<span style="color:orange">index 0</span>] : Volume (scan or seg) which the registration matrix will be applied to.
 +
** <span style="color:green">'''Check it if the input Volume is a segmentation'''</span> [<span style="color:orange">--isSeg</span>] : Check box which must be selected if the input Volume is a segmentation.
 
** <span style="color:green">'''Registration Matrix'''</span> [<span style="color:orange">-f --transformationFile</span>] : DOF file with the coordinate matrix which will be applied to the Input Volume.
 
** <span style="color:green">'''Registration Matrix'''</span> [<span style="color:orange">-f --transformationFile</span>] : DOF file with the coordinate matrix which will be applied to the Input Volume.
 
** <span style="color:green">'''Reference Volume (To set Output Parameters)'''</span> [<span style="color:orange">-R --Reference</span>] : Resampled Output Volume
 
** <span style="color:green">'''Reference Volume (To set Output Parameters)'''</span> [<span style="color:orange">-R --Reference</span>] : Resampled Output Volume
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* <span style="color:blue">'''''Output Volume'''''</span>:  
 
* <span style="color:blue">'''''Output Volume'''''</span>:  
 
** <span style="color:green">'''Output Volume'''</span> [<span style="color:orange">index: 1</span>] : Resampled Output Volume modified by the registration matrix
 
** <span style="color:green">'''Output Volume'''</span> [<span style="color:orange">index: 1</span>] : Resampled Output Volume modified by the registration matrix
 
[[Image:DownsizeInterface.png|thumb|280px|User Interface]]
 

Latest revision as of 15:15, 31 October 2013

Home < Documentation < Nightly < Modules < ApplyRegistrationMatrix


For the latest Slicer documentation, visit the read-the-docs.



Apply Matrix

Apply Matrix

User Interface

General Information

Module Type & Category

Type: Extension

Category: Volume Applying Registration matrix


Authors, Collaborators & Contact

Author: Vinicius Boen

Contributors: Francois Budin (NIRAL, University of North Carolina), Martin Styner (NIRAL, University Of North Carolina), Beatriz Paniagua (NIRAL, University Of North Carolina), Lucia Cevidanes (University of Michigan - School of Dentistry)

Contact: vboen@umich.edu

Module Description

  • Input Volumes and Matrix:
    • Input Volume [index 0] : Volume (scan or seg) which the registration matrix will be applied to.
    • Check it if the input Volume is a segmentation [--isSeg] : Check box which must be selected if the input Volume is a segmentation.
    • Registration Matrix [-f --transformationFile] : DOF file with the coordinate matrix which will be applied to the Input Volume.
    • Reference Volume (To set Output Parameters) [-R --Reference] : Resampled Output Volume
  • Output Volume:
    • Output Volume [index: 1] : Resampled Output Volume modified by the registration matrix