Difference between revisions of "Documentation/4.1/SlicerApplication/LookupTables/TractographyColors"

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|-
 
|-
 
|0
 
|0
 +
|
 +
|style="background:rgb(0,0,0);color:white"|rgba(0,0,0,0)
 
|background
 
|background
−
|style="background:rgb(0,0,0);color:white"|rgba(0,0,0,0)
 
−
|
 
 
|-
 
|-
 
|1
 
|1
 +
|corpus callosum
 +
|style="background:rgb(255, 215, 0)"|rgb(255, 215, 0)
 
|CC
 
|CC
−
|style="background:rgb(255, 215, 0)"|rgb(255, 215, 0)
 
−
|corpus callosum
 
 
|-
 
|-
 
|2
 
|2
 +
|genu of the corpus callosum
 +
|style="background:rgb(225, 215, 0)"|rgb(225, 215, 0)
 
|CC genu
 
|CC genu
−
|style="background:rgb(225, 215, 0)"|rgb(225, 215, 0)
 
−
|genu of the corpus callosum
 
 
|-
 
|-
 
|3
 
|3
 +
|body of the corpus callosum
 +
|style="background:rgb(195, 215, 0)"|rgb(195, 215, 0)
 
|CC body
 
|CC body
−
|style="background:rgb(195, 215, 0)"|rgb(195, 215, 0)
 
−
|body of the corpus callosum
 
 
|-
 
|-
 
|4
 
|4
 +
|splenium of the corpus callosum
 +
|style="background:rgb(165, 215, 0)"|rgb(165, 215, 0)
 
|CC splenium
 
|CC splenium
−
|style="background:rgb(165, 215, 0)"|rgb(165, 215, 0)
 
−
|splenium of the corpus callosum
 
 
|-
 
|-
 
|5
 
|5
−
|DHC
+
|dorsal hippocampal comissure
 
|style="background:rgb(122, 150, 170)"|rgb(122, 120, 170)
 
|style="background:rgb(122, 150, 170)"|rgb(122, 120, 170)
−
|dorsal hippocampal comissure
+
|DHC
 
|-
 
|-
 
|6
 
|6
−
|AnC
+
|anterior comissure
 
|style="background:rgb(92, 140, 170)"|rgb(92, 140, 170)
 
|style="background:rgb(92, 140, 170)"|rgb(92, 140, 170)
−
|anterior comissure
+
|AC
 
|-
 
|-
 
|7
 
|7
 +
|posterior comissure
 +
|style="background:rgb(62, 160, 170)"|rgb(62, 160, 170)
 
|PC
 
|PC
−
|style="background:rgb(62, 160, 170)"|rgb(62, 160, 170)
 
−
|posterior comissure
 
 
|-
 
|-
 
|8
 
|8
 +
|forniceal comissure
 +
|style="background:rgb( 32, 180, 170)"|rgb( 32, 180, 170)
 
|FC
 
|FC
−
|style="background:rgb( 32, 180, 170)"|rgb( 32, 180, 170)
 
−
|forniceal comissure
 
 
|-
 
|-
 
|9
 
|9
 +
|pontine tract
 +
|style="background:rgb(92, 161, 124)"|rgb(92, 161, 124)
 
|PT
 
|PT
−
|style="background:rgb(68,131,98)"|rgb(68,131,98)
 
−
|pontine tract
 
 
|-
 
|-
 
|10
 
|10
 +
|short cortico-cortical pathway
 +
|style="background:rgb(83,146,164)"|rgb(83,146,164)
 
|U
 
|U
−
|style="background:rgb(83,146,164)"|rgb(83,146,164)
 
−
|short cortico-cortical pathway
 
 
|-
 
|-
 
|11
 
|11
−
|r AC
+
|right arcuate fasicle
 
|style="background:rgb(221,130,101)"|rgb(221,130,101)
 
|style="background:rgb(221,130,101)"|rgb(221,130,101)
−
|right arcuate fasciculus
+
|r AF
 
|-
 
|-
 
|12
 
|12
−
|l AC
+
|left arcuate fasicle
 
|style="background:rgb(216,101,79)"|rgb(216,101,79)
 
|style="background:rgb(216,101,79)"|rgb(216,101,79)
−
|left arcuate fasciculus
+
|l AF
 
|-
 
|-
 
|13
 
|13
 +
|right inferior occipito-frontal fasicle
 +
|style="background:rgb(144,238,144)"|rgb(144,238,144)
 
|r IOFF
 
|r IOFF
−
|style="background:rgb(144,238,144)"|rgb(144,238,144)
 
−
|right inferior occipito-frontal fasciculus
 
 
|-
 
|-
 
|14
 
|14
 +
|left inferior occipito-frontal fasicle
 +
|style="background:rgb( 60, 179, 113)"|rgb( 60, 179, 113)
 
|l IOFF
 
|l IOFF
−
|style="background:rgb( 60, 179, 113)"|rgb( 60, 179, 113)
 
−
|left inferior occipito-frontal fasciculus
 
 
|-
 
|-
 
|15
 
|15
 +
|right inferior longitudinal fasicle
 +
|style="background:rgb(220,245,20)"|rgb(220,245,20)
 
|r ILF
 
|r ILF
−
|style="background:rgb(220,245,20)"|rgb(220,245,20)
 
−
|right inferior longitudinal fasciculus
 
 
|-
 
|-
 
|16
 
|16
 +
|left inferior longitudinal fasicle
 +
|style="background:rgb(176, 176, 8)"|rgb(176, 176, 8)
 
|l ILF
 
|l ILF
−
|style="background:rgb(128, 128, 0)"|rgb(128, 128, 0)
 
−
|left inferior longitudinal fasciculus
 
 
|-
 
|-
 
|17
 
|17
−
|r UNC
+
|right uncinate fasicle
 
|style="background:rgb(255,250,220)"|rgb(255,250,220)
 
|style="background:rgb(255,250,220)"|rgb(255,250,220)
−
|right uncinate fasciculus
+
|r UF
 
|-
 
|-
 
|18
 
|18
−
|l UNC
+
|left uncinate fasicle
 
|style="background:rgb(230,220,70)"|rgb(230,220,70)
 
|style="background:rgb(230,220,70)"|rgb(230,220,70)
−
|left uncinate fasciculus
+
|l UF
 
|-
 
|-
 
|19
 
|19
 +
|right cortico-spinal tract
 +
|style="background:rgb(230, 230, 250)"|rgb(230, 230, 250)
 
|r CST
 
|r CST
−
|style="background:rgb(230, 230, 250)"|rgb(230, 230, 250)
 
−
|right cortico-spinal tract
 
 
|-
 
|-
 
|20
 
|20
 +
|left cortico-spinal tract
 +
|style="background:rgb(200,200,235)"|rgb(200,200,235)
 
|l CST
 
|l CST
−
|style="background:rgb(200,200,235)"|rgb(200,200,235)
 
−
|left cortico-spinal tract
 
 
|-
 
|-
 
|21
 
|21
 +
|right optic radiation
 +
|style="background:rgb(135, 206, 235)"|rgb(135, 206, 235)
 
|r OR
 
|r OR
−
|style="background:rgb(135, 206, 235)"|rgb(135, 206, 235)
 
−
|right optic radiation
 
 
|-
 
|-
 
|22
 
|22
 +
|left optic radiation
 +
|style="background:rgb(0,151,206)"|rgb(0,151,206)
 
|l OR
 
|l OR
−
|style="background:rgb(0,151,206)"|rgb(0,151,206)
 
−
|left optic radiation
 
 
|-
 
|-
 
|23
 
|23
 +
|right cingulum bundle
 +
|style="background:rgb(255, 99, 71)"|rgb(255, 99, 71)
 
|r CB
 
|r CB
−
|style="background:rgb(255, 99, 71)"|rgb(255, 99, 71)
 
−
|right cingulate bundle
 
 
|-
 
|-
 
|24
 
|24
 +
|left cingulum bundle
 +
|style="background:rgb(250, 90, 90)"|rgb(250, 90, 90)
 
|l CB
 
|l CB
−
|style="background:rgb(178, 34, 34)"|rgb(178, 34, 34)
 
−
|left cingulate bundle
 
 
|-
 
|-
 
|25
 
|25
−
|r SLF 1
+
|right superior longitudinal fasicle I
 
|style="background:rgb(183,214,211)"|rgb(183,214,211)
 
|style="background:rgb(183,214,211)"|rgb(183,214,211)
−
|right superior longitudinal fasciculus 1
+
|r SLF I
 
|-
 
|-
 
|26
 
|26
−
|l SLF 1
+
|left superior longitudinal fasicle I
 
|style="background:rgb(152,189,207)"|rgb(152,189,207)
 
|style="background:rgb(152,189,207)"|rgb(152,189,207)
−
|left superior longitudinal fasciculus 1
+
|l SLF I
 
|-
 
|-
 
|27
 
|27
−
|r SLF 2
+
|right superior longitudinal fasicle II
 
|style="background:rgb(178,212,242)"|rgb(178,212,242)
 
|style="background:rgb(178,212,242)"|rgb(178,212,242)
−
|right superior longitudinal fasciculus 2
+
|r SLF II
 
|-
 
|-
 
|28
 
|28
−
|l SLF 2
+
|left superior longitudinal fasicle II
 
|style="background:rgb(111,184,210)"|rgb(111,184,210)
 
|style="background:rgb(111,184,210)"|rgb(111,184,210)
−
|left superior longitudinal fasciculus 2
+
|l SLF II
 
|-
 
|-
 
|29
 
|29
−
|r SLF 3
+
|right superior longitudinal fasicle III
 
|style="background:rgb(111,197,131)"|rgb(111,197,131)
 
|style="background:rgb(111,197,131)"|rgb(111,197,131)
−
|right superior longitudinal fasciculus 3
+
|r SLF III
 
|-
 
|-
 
|30
 
|30
−
|l SLF 3
+
|left superior longitudinal fasicle III
 
|style="background:rgb(68,172,100)"|rgb(68,172,100)
 
|style="background:rgb(68,172,100)"|rgb(68,172,100)
−
|left superior longitudinal fasciculus 3
+
|l SLF III
 
|-
 
|-
 
|31
 
|31
−
|r MDLF
+
|right middle longitudinal fasicle
 
|style="background:rgb(85,188,255)"|rgb(85,188,255)
 
|style="background:rgb(85,188,255)"|rgb(85,188,255)
−
|right  middle longitudinal fasciculus
+
|r MdLF
 
|-
 
|-
 
|32
 
|32
−
|l MDLF
+
|left middle longitudinal fasicle
 
|style="background:rgb( 65, 105, 225)"|rgb( 65, 105, 225)
 
|style="background:rgb( 65, 105, 225)"|rgb( 65, 105, 225)
−
|left  middle longitudinal fasciculus
+
|l MdLF
 
|-
 
|-
 
|33
 
|33
−
|r EC
 
−
|style="background:rgb(178,100,0)"|rgb(178,100,0)
 
 
|right extreme capsule
 
|right extreme capsule
 +
|style="background:rgb(196, 110, 0)"|rgb(196, 110, 0)
 +
|r EmC
 
|-
 
|-
 
|34
 
|34
−
|l EC
 
−
|style="background:rgb(160, 82, 45)"|rgb(160, 82, 45)
 
 
|left extreme capsule
 
|left extreme capsule
 +
|style="background:rgb(176, 90, 50)"|rgb(160, 82, 45)
 +
|l EmC
 
|-
 
|-
 
|35
 
|35
 +
|right superior occipito-frontal fasicle
 +
|style="background:rgb(216,191,216)"|rgb(216,191,216)
 
|r SOFF
 
|r SOFF
−
|style="background:rgb(216,191,216)"|rgb(216,191,216)
 
−
|right superior occipito-frontal fasciculus
 
 
|-
 
|-
 
|36
 
|36
 +
|left superior occipito-frontal fasicle
 +
|style="background:rgb(221, 160, 221)"|rgb(221, 160, 221)
 
|l SOFF
 
|l SOFF
−
|style="background:rgb(221, 160, 221)"|rgb(221, 160, 221)
 
−
|left superior occipito-frontal fasciculus
 
 
|-
 
|-
 
|37
 
|37
 +
|right cortico-thalamical pathways
 +
|style="background:rgb(245, 222, 179)"|rgb(245, 222, 179)
 
|r CT
 
|r CT
−
|style="background:rgb(245, 222, 179)"|rgb(245, 222, 179)
 
−
|right cortico-thalamical pathways
 
 
|-
 
|-
 
|38
 
|38
 +
|left cortico-thalamical pathways
 +
|style="background:rgb(210, 180, 140)"|rgb(210, 180, 140)
 
|l CT
 
|l CT
−
|style="background:rgb(210, 180, 140)"|rgb(210, 180, 140)
 
−
|left cortico-thalamical pathways
 
 
|-
 
|-
 
|39
 
|39
 +
|right cortico-striatal pathways
 +
|style="background:rgb(244, 164, 96)"|rgb(244, 164, 96)
 
|r CS
 
|r CS
−
|style="background:rgb(244, 164, 96)"|rgb(244, 164, 96)
 
−
|right cortico-striatal pathways
 
 
|-
 
|-
 
|40
 
|40
 +
|left cortico-striatal pathways
 +
|style="background:rgb(177,122,101)"|rgb(177,122,101)
 
|l CS
 
|l CS
−
|style="background:rgb(177,122,101)"|rgb(177,122,101)
 
−
|left cortico-striatal pathways
 
 
|-
 
|-
 
|41
 
|41
 +
|right cortico-pontine projections
 +
|style="background:rgb(250,250,225)"|rgb(250,250,225)
 
|r CP
 
|r CP
−
|style="background:rgb(250,250,225)"|rgb(250,250,225)
 
−
|right cortico-pontine projections
 
 
|-
 
|-
 
|42
 
|42
 +
|left cortico-pontine projections
 +
|style="background:rgb(200,200,200)"|rgb(200,200,200)
 
|l CP
 
|l CP
−
|style="background:rgb(200,200,200)"|rgb(200,200,200)
 
−
|left cortico-pontine projections
 
 
|-
 
|-
 
|43
 
|43
 +
|peritumoral fibers
 +
|style="background:rgb(100, 177, 198)"|rgb(100, 177, 198)
 
|PF
 
|PF
−
|style="background:rgb(83,146,164)"|rgb(83,146,164)
 
−
|peritumoral fibers
 
 
|-
 
|-
 
|44
 
|44
Line 322: Line 323:
 
|
 
|
 
|-
 
|-
−
|69
+
|59
 
|
 
|
 
|style="background:rgb(255,255,255)"|rgb(255,255,255)
 
|style="background:rgb(255,255,255)"|rgb(255,255,255)
Line 333: Line 334:
 
|-
 
|-
 
|61
 
|61
 +
|Probe 1
 +
|style="background:rgb(252,115,105)"|rgb(252,115,105)
 
|P1
 
|P1
−
|style="background:rgb(252,115,105)"|rgb(252,115,105)
 
−
|probe 1
 
 
|-
 
|-
 
|62
 
|62
 +
|Probe 2
 +
|style="background:rgb(222,115,105)"|rgb(222,115,105)
 
|P2
 
|P2
−
|style="background:rgb(222,115,105)"|rgb(222,115,105)
 
−
|probe 2
 
 
|-
 
|-
 
|63
 
|63
 +
|Probe 3
 +
|style="background:rgb(192,115,105)"|rgb(192,115,105)
 
|P3
 
|P3
−
|style="background:rgb(192,115,105)"|rgb(192,115,105)
 
−
|probe 3
 
 
|-
 
|-
 
|64
 
|64
 +
|Probe 4
 +
|style="background:rgb(162,115,105)"|rgb(162,115,105)
 
|P4
 
|P4
−
|style="background:rgb(162,115,105)"|rgb(162,115,105)
 
−
|probe 4
 
 
|}
 
|}

Latest revision as of 07:28, 14 June 2013

Home < Documentation < 4.1 < SlicerApplication < LookupTables < TractographyColors


For the latest Slicer documentation, visit the read-the-docs.


Template:Documentation/4.1/TractographyColors

Work in progress
 WARNING: This LUT is Work in Progress, which means:
  • the label integers and values may change at any time


This is the look-up table for the parcellation of the white matter of the brain.

  • Authors: Ron Kikinis, Demian Wassermann, Marianna Jakab


Lookup table

integer_label text_label color notes
0 rgba(0,0,0,0) background
1 corpus callosum rgb(255, 215, 0) CC
2 genu of the corpus callosum rgb(225, 215, 0) CC genu
3 body of the corpus callosum rgb(195, 215, 0) CC body
4 splenium of the corpus callosum rgb(165, 215, 0) CC splenium
5 dorsal hippocampal comissure rgb(122, 120, 170) DHC
6 anterior comissure rgb(92, 140, 170) AC
7 posterior comissure rgb(62, 160, 170) PC
8 forniceal comissure rgb( 32, 180, 170) FC
9 pontine tract rgb(92, 161, 124) PT
10 short cortico-cortical pathway rgb(83,146,164) U
11 right arcuate fasicle rgb(221,130,101) r AF
12 left arcuate fasicle rgb(216,101,79) l AF
13 right inferior occipito-frontal fasicle rgb(144,238,144) r IOFF
14 left inferior occipito-frontal fasicle rgb( 60, 179, 113) l IOFF
15 right inferior longitudinal fasicle rgb(220,245,20) r ILF
16 left inferior longitudinal fasicle rgb(176, 176, 8) l ILF
17 right uncinate fasicle rgb(255,250,220) r UF
18 left uncinate fasicle rgb(230,220,70) l UF
19 right cortico-spinal tract rgb(230, 230, 250) r CST
20 left cortico-spinal tract rgb(200,200,235) l CST
21 right optic radiation rgb(135, 206, 235) r OR
22 left optic radiation rgb(0,151,206) l OR
23 right cingulum bundle rgb(255, 99, 71) r CB
24 left cingulum bundle rgb(250, 90, 90) l CB
25 right superior longitudinal fasicle I rgb(183,214,211) r SLF I
26 left superior longitudinal fasicle I rgb(152,189,207) l SLF I
27 right superior longitudinal fasicle II rgb(178,212,242) r SLF II
28 left superior longitudinal fasicle II rgb(111,184,210) l SLF II
29 right superior longitudinal fasicle III rgb(111,197,131) r SLF III
30 left superior longitudinal fasicle III rgb(68,172,100) l SLF III
31 right middle longitudinal fasicle rgb(85,188,255) r MdLF
32 left middle longitudinal fasicle rgb( 65, 105, 225) l MdLF
33 right extreme capsule rgb(196, 110, 0) r EmC
34 left extreme capsule rgb(160, 82, 45) l EmC
35 right superior occipito-frontal fasicle rgb(216,191,216) r SOFF
36 left superior occipito-frontal fasicle rgb(221, 160, 221) l SOFF
37 right cortico-thalamical pathways rgb(245, 222, 179) r CT
38 left cortico-thalamical pathways rgb(210, 180, 140) l CT
39 right cortico-striatal pathways rgb(244, 164, 96) r CS
40 left cortico-striatal pathways rgb(177,122,101) l CS
41 right cortico-pontine projections rgb(250,250,225) r CP
42 left cortico-pontine projections rgb(200,200,200) l CP
43 peritumoral fibers rgb(100, 177, 198) PF
44 rgb(255,255,255)
45 rgb(255,255,255)
46 rgb(255,255,255)
47 rgb(255,255,255)
48 rgb(255,255,255)
49 rgb(255,255,255)
50 rgb(255,255,255)
51 rgb(255,255,255)
52 rgb(255,255,255)
53 rgb(255,255,255)
54 rgb(255,255,255)
55 rgb(255,255,255)
56 rgb(255,255,255)
57 rgb(255,255,255)
58 rgb(255,255,255)
59 rgb(255,255,255)
60 rgb(255,255,255)
61 Probe 1 rgb(252,115,105) P1
62 Probe 2 rgb(222,115,105) P2
63 Probe 3 rgb(192,115,105) P3
64 Probe 4 rgb(162,115,105) P4
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