Difference between revisions of "Documentation/4.1/Modules"
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=Modules by Category= | =Modules by Category= | ||
==Core Modules== | ==Core Modules== | ||
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==IGT== | ==IGT== | ||
*[[Documentation/{{documentation/version}}/Modules/OpenIGTLinkIF| OpenIGTLink IF]] (Junichi Tokuda) [[image:UnderConstruction.png|tumb|10px]] | *[[Documentation/{{documentation/version}}/Modules/OpenIGTLinkIF| OpenIGTLink IF]] (Junichi Tokuda) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | *[[Documentation/{{documentation/version}}/Modules/VolumeResliceDriver| Volume Reslice Driver]] (Junichi Tokuda) [[image:UnderConstruction.png|tumb|10px]] | ||
==Filtering== | ==Filtering== | ||
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*Performance Tests | *Performance Tests | ||
*Tractography | *Tractography | ||
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| + | ==Legacy== | ||
| + | *Converters | ||
| + | **[[Documentation/{{documentation/version}}/Modules/BSplineToDeformationField|BSpline To Deformation Field]] | ||
| + | *Diffusion | ||
| + | **Denoising | ||
| + | ***[[Documentation/{{documentation/version}}/Modules/DWIUnbiasedNonLocalMeansFilter|DWI Unbiased Non Local Means Filter]] | ||
| + | *Filtering | ||
| + | **[[Documentation/{{documentation/version}}/Modules/MRIBiasFieldCorrection|MRI Bias Field Correction]] (Sylvain Jaume) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] (Bill Lorensen) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/ResampleScalarVolume|Resample Scalar Volume]] (Jim Miller) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | *Registration | ||
| + | **[[Documentation/{{documentation/version}}/Modules/RigidRegistration|Rigid Registration]] (Jim Miller) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/AffineRegistration|Affine Registration]] (Daniel Blezek) [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/BSplineDeformableRegistration|BSpline Deformable Registration]] [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/LinearRegistration|Linear Registration]] [[image:UnderConstruction.png|tumb|10px]] | ||
| + | **[[Documentation/{{documentation/version}}/Modules/MultiResolutionAffineRegistration|MultiResolution Affine Registration]] (Casey Goodlett)[[image:UnderConstruction.png|tumb|10px]] | ||
| + | <!-- | ||
| + | **[[Documentation/{{documentation/version}}/Modules/TestGridTransformRegistration|Test Grid Transform Registration]] [[image:UnderConstruction.png|tumb|10px]] | ||
| + | --> | ||
| + | *Segmentation | ||
| + | **[[Documentation/{{documentation/version}}/Modules/OtsuThresholdSegmentation|Otsu Threshold Segmentation]] (Bill Lorensen) [[image:UnderConstruction.png|tumb|10px]] | ||
Latest revision as of 07:24, 14 June 2013
Home < Documentation < 4.1 < Modules
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For the latest Slicer documentation, visit the read-the-docs. |
Contents
Modules by Category
Core Modules
- Annotations (Nicole Aucoin)
- Colors (Nicole Aucoin)
- Data (Julien Finet)
- DICOM (Steve Pieper)
- Editor (Steve Pieper)
- Models (Nicole Aucoin)
- SceneViews (Nicole Aucoin)
- Transforms (Alex Yarmarkovich)
- View Controllers (Jim Miller)
- Volumes (Steve Pieper)
- Volume Rendering (Julien Finet)
- Welcome to Slicer (Wendy Plesniak)
Wizards
- ChangeTracker (Andrey Fedorov)
Informatics
- Sample Data (Steve Pieper)
Registration
- Introduction to Registration (Dominik Meier)
- General Brainsfit Registration (Hans Johnson)
- Resample Image (BRAINS) (Hans Johnson)
- Specialized
- ACPC Transform (Nicole Aucoin)
- Demon Registration (BRAINS) (Hans Johnson)
- Fiducial Registration (Stephen Aylward)
- Vector Demon Registration (Hans Johnson)
- Reformat (Michael Jeulin-Lagarrigue)
Segmentation
- EMSegment Easy (no atlas) (Kilian Pohl)
- EMSegment (with atlas) (Kilian Pohl)
- Simple Region Growing Segmentation (Jim Miller, Harini Veeraraghavan)
- Specialized
- EMSegment Command-line (Kilian Pohl)
- Foreground Masking (BRAINS) (Hans Johnson)
- Robust Statistics Segmenter (Yi Gao)
Quantification
- Data Probe (Steve Pieper)
- Label Statistics (Steve Pieper)
- PET Standard Uptake Value Computation (Nicole Aucoin)
- Change quantification
- Intensity Difference Metric (Andrey Fedorov)
Diffusion
- DWI to Full Brain Tractography (Demian Wasserman)
- Denoising
- DWI Joint Rician LMMSE Image Filter (Demian Wasserman)
- DWI Rician LMMSE Filter (Demian Wasserman)
- DWI Joint Rician LMMSE Image Filter (Demian Wasserman)
- Tractography
- Tractography Display (Demian Wasserman)
- Tractography Fiducial Seeding (Demian Wasserman)
- Tractography Label Map Seeding (Demian Wasserman)
- Tractography Display (Demian Wasserman)
- Utilities
- DWI To DTI Estimation (Demian Wasserman)
- Diffusion Tensor Scalar Measurements (Demian Wasserman)
- Diffusion Weighted Volume Masking (Demian Wasserman)
- Resample DTI Volume (Demian Wasserman)
- DWI To DTI Estimation (Demian Wasserman)
- Data Conversion
IGT
- OpenIGTLink IF (Junichi Tokuda)
- Volume Reslice Driver (Junichi Tokuda)
Filtering
- N4ITK Bias Field Correction (Andrey Fedorov)
- CheckerBoard Filter (Jim Miller)
- Extract Skeleton (Jim Miller)
- Histogram Matching (Jim Miller)
- Image Label Combine (Alex Yarmarkovich)
- Resample Scalar/Vector/DWI Volume (Francois Budin)
- Threshold Scalar Volume (Nicole Aucoin)
- Voting Binary Hole Filling Image Filter (Jim Miller)
- Arithmetic
- Add Scalar Volumes (Jim Miller)
- Cast Scalar Volume (Nicole Aucoin)
- Mask Scalar Volume (Nicole Aucoin)
- Multiply Scalar Volumes (Jim Miller)
- Subtract Scalar Volumes (Jim Miller)
- Add Scalar Volumes (Jim Miller)
- Denoising
- Gradient Anisotropic Diffusion (Jim Miller)
- Curvature Anisotropic Diffusion (Jim Miller)
- Gaussian Blur Image Filter (Stephen Aylward)
- Median Image Filter (Jim Miller)
- Gradient Anisotropic Diffusion (Jim Miller)
- Morphology
- Grayscale Fill Hole Image Filter (Jim Miller)
- Grayscale Grind Peak Image Filter (Jim Miller)
Surface Models
- Grayscale Model Maker (Jim Miller)
- Label Map Smoothing
- Merge Models (Nicole Aucoin)
- Model Maker (Nicole Aucoin)
- Model To LabelMap (Nicole Aucoin)
- Probe Volume With Model (Lauren O'Donnell)
Converters
- Create DICOM Series (Jim Miller)
- Crop Volume (Andrey Fedorov)
- Dicom to Nrrd Converter (Jim Miller)
- Orient Scalar Volume (Jim Miller)
Endoscopy
- Endoscopy (Steve Pieper)
Work in Progress
- MultiVolume Support
- MultiVolume Importer (Andrey Fedorov)
- MultiVolume Explorer (Andrey Fedorov)
Developer Tools
- Cameras (Julien Finet)
- Event Broker (Julien Finet)
- Execution Model Tour (JC Fillion-Robin)
- Module Template (JC Fillion-Robin)
- Performance Tests
- Tractography
Legacy
- Converters
- Diffusion
- Denoising
- Filtering
- MRI Bias Field Correction (Sylvain Jaume)
- Otsu Threshold Image Filter (Bill Lorensen)
- Resample Scalar Volume (Jim Miller)
- MRI Bias Field Correction (Sylvain Jaume)
- Registration
- Rigid Registration (Jim Miller)
- Affine Registration (Daniel Blezek)
- BSpline Deformable Registration
- Expert Automated Registration
- Linear Registration
- MultiResolution Affine Registration (Casey Goodlett)
- Rigid Registration (Jim Miller)
- Segmentation
- Otsu Threshold Segmentation (Bill Lorensen)
- Otsu Threshold Segmentation (Bill Lorensen)
