Difference between revisions of "Modules:ExtractSubvolume-Documentation-3.4"
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===Source code & documentation=== | ===Source code & documentation=== |
Revision as of 18:06, 6 April 2009
Home < Modules:ExtractSubvolume-Documentation-3.4Return to Slicer 3.4 Documentation
Module Name
Extract Subvolume
General Information
Module Type & Category
Type: Python Scripted Module
Category: Converters
Authors, Collaborators & Contact
- Steve Pieper, Isomics
- Contact: pieper@bwh.harvard.edu
Module Description
Create a new volume that contains the extent of the input volume that falls within the space defined by two fiducials. Note that the fiducials may not exactly match the voxel boundaries of the input volume so not all cases are handled. The first two fiducials of the input list are used.
Usage
Examples, Use Cases & Tutorials
This can be useful when a target piece of anatomy is a small part of the source volume and you want to run a filter or other routine on only the subset.
Quick Tour of Features and Use
- Pick the two input corner points by creating fidcucials.
- Select the input volume to extract from.
- Typically you will want to create a new output volume.
Clicking Apply will generate and display the subvolume.
Note: you can modify the fiducials and re-apply the module to tweak the extent of the subvolume.
Development
Dependencies
Python
Known bugs
Follow this link to the Slicer3 bug tracker.
Usability issues
Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.
Note: there is currently no technique to paste a subvolume into a volume.
Source code & documentation
Follow this link to the module.
Links to documentation generated by doxygen.
More Information
Acknowledgment
This work is supported by NA-MIC, NAC, BIRN, NCIGT, and the Slicer Community. See http://www.slicer.org for details.