Difference between revisions of "Modules:DiffusionTensorEstimation-Documentation-3.4"
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===Module Type & Category=== | ===Module Type & Category=== | ||
| − | Type: | + | Type: CLI |
Category: Base or (Filtering, Registration, ''etc.'') | Category: Base or (Filtering, Registration, ''etc.'') | ||
===Authors, Collaborators & Contact=== | ===Authors, Collaborators & Contact=== | ||
| − | * Author1: | + | * Author1: Raúl San José Estépar, BWH |
| − | * Contributor1: | + | * Contributor1: Gordon Kindlmann, University of Chicago |
| − | + | * Contact: lmi.bwh.harvard.edu/~rjosest | |
| − | * Contact: | ||
===Module Description=== | ===Module Description=== | ||
| − | + | This module estimates the diffusion tensor model from a Diffusion Weighted Image (DWI) Volume. The results is a tensor volume that can be used to compute different anisotropy measurements, for example Fractional Anisotropy, and perform tractography. | |
== Usage == | == Usage == | ||
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===Examples, Use Cases & Tutorials=== | ===Examples, Use Cases & Tutorials=== | ||
| − | * | + | * Compute DTI volume from DWI. It is the first step of any pipeline that uses DTI. |
| − | |||
| − | |||
===Quick Tour of Features and Use=== | ===Quick Tour of Features and Use=== | ||
| − | + | The module takes one DWI volume and computes a DTI volume. The parameters are the following: | |
* '''Input panel:''' | * '''Input panel:''' | ||
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===Dependencies=== | ===Dependencies=== | ||
| − | + | None | |
===Known bugs=== | ===Known bugs=== | ||
Revision as of 19:16, 17 March 2009
Home < Modules:DiffusionTensorEstimation-Documentation-3.4Return to Slicer 3.4 Documentation
Module Name
MyModule
General Information
Module Type & Category
Type: CLI
Category: Base or (Filtering, Registration, etc.)
Authors, Collaborators & Contact
- Author1: Raúl San José Estépar, BWH
- Contributor1: Gordon Kindlmann, University of Chicago
- Contact: lmi.bwh.harvard.edu/~rjosest
Module Description
This module estimates the diffusion tensor model from a Diffusion Weighted Image (DWI) Volume. The results is a tensor volume that can be used to compute different anisotropy measurements, for example Fractional Anisotropy, and perform tractography.
Usage
Examples, Use Cases & Tutorials
- Compute DTI volume from DWI. It is the first step of any pipeline that uses DTI.
Quick Tour of Features and Use
The module takes one DWI volume and computes a DTI volume. The parameters are the following:
- Input panel:
- Parameters panel:
- Output panel:
- Viewing panel:
Development
Dependencies
None
Known bugs
Follow this link to the Slicer3 bug tracker.
Usability issues
Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.
Source code & documentation
Customize following links for your module.
Links to documentation generated by doxygen.
More Information
Acknowledgment
Include funding and other support here.
References
Publications related to this module go here. Links to pdfs would be useful.
