Difference between revisions of "Documentation/Nightly/Extensions/TCIABrowser"

From Slicer Wiki
Jump to: navigation, search
(redirect to the docs in GitHub)
Tags: Visual edit, Replaced
 
(48 intermediate revisions by 4 users not shown)
Line 1: Line 1:
<noinclude>{{documentation/versioncheck}}</noinclude>
+
<noinclude>{{documentation/versioncheck}}
<!-- ---------------------------- -->
+
</noinclude>
{{documentation/{{documentation/version}}/module-header}}
 
<!-- ---------------------------- -->
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
 
{{documentation/{{documentation/version}}/module-introduction-start|{{documentation/modulename}}}}
 
{{documentation/{{documentation/version}}/module-introduction-row}}
 
Extension: [[Documentation/{{documentation/version}}/Extensions/TCIABrowser|TCIABrowser]]<br>
 
Acknowledgments:
 
This work is funded by the National Institutes of Health, National Cancer Institute through the Grant [http://qiicr.org Quantitative Image Informatics for Cancer Reasearch (QIICR)] (U24 CA180918) (PIs Kikinis and Fedorov).<br>
 
Authors: Alireza Mehrtash({{collaborator|name|spl}}), Andrey Fedorov ({{collaborator|name|spl}})<br>
 
Contact: Alireza Mehrtash, mehrtash at bwh dot harvard dot edu<br>
 
 
 
License: [http://www.slicer.org/pages/LicenseText Slicer License]
 
 
 
{{documentation/{{documentation/version}}/module-introduction-logo-gallery
 
|{{collaborator|logo|qiicr}}|{{collaborator|longname|qiicr}}
 
|{{collaborator|logo|spl}}|{{collaborator|longname|spl}}
 
|{{collaborator|logo|namic}}|{{collaborator|longname|namic}}
 
}}
 
 
 
{{documentation/{{documentation/version}}/module-introduction-end}}
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Module Description}}
 
The Cancer Imaging Archive (TCIA) hosts a large collection of Cancer medical imaging data which is available to public through a programmatic interface (REST API). TCIA Browser is a Slicer module by which the user can connect to the TCIA archive, browse different collections, patients, studies and series, download the images and visualize them in 3D Slicer.
 
 
 
 
 
<!-- ---------------------------- -->
 
 
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Tutorials}}
 
Not available at this time.
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Panels and their use}}
 
 
 
{|
 
* '''Step 1: Connect to the server'''
 
The Cancer Imaging Archive provides a
 
|[[Image:Tcia-browser-1.png|thumb|360px|Module GUI]]
 
|}
 
 
 
{|
 
* '''Step 2: Browse the collections'''
 
|[[Image:Tcia-browser-4.png|thumb|820px|Module GUI]]
 
|}
 
 
 
{|
 
* '''Step 3: Download a Series'''
 
|[[Image:Tcia-browser-5.png|thumb|720px|Module GUI]]
 
|
 
 
 
|}
 
 
 
 
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Similar Modules}}
 
* [[Documentation/4.3/Extensions/XNATSlicer|XNATSlicer]]
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|References}}
 
 
 
* [http://qiicr.org/ Quantitative Image Informatics for Cancer Research (QIICR)]
 
* [http://imaging.cancer.gov/programsandresources/specializedinitiatives/qin Quantitative Imaging Network (QIN)]
 
* [http://cancerimagingarchive.net/ TCIA Home Page]
 
* [https://wiki.cancerimagingarchive.net/display/Public/TCIA+Programmatic+Interface+%28REST+API%29+Usage+Guide TCIA Rest API Documentation]
 
* [http://www.na-mic.org/Wiki/index.php/2014_Project_Week:TCIA_Browser_Extension_in_Slicer Project page at NAMIC 2014 Project Week]
 
 
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Information for Developers}}
 
* [https://github.com/QIICR/TCIABrowser Source Code]
 
{{documentation/{{documentation/version}}/module-developerinfo}}
 
 
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-footer}}
 
 
[[Category:Documentation/{{documentation/version}}/Modules/Informatics]]
 
[[Category:Documentation/{{documentation/version}}/Modules/Informatics]]
<!-- ---------------------------- -->
+
'''Please see documentation of this module here: https://github.com/QIICR/TCIABrowser'''

Latest revision as of 20:57, 3 August 2023

Home < Documentation < Nightly < Extensions < TCIABrowser