Difference between revisions of "Documentation/Nightly/Extensions/SurfaceReconstruction"

From Slicer Wiki
Jump to: navigation, search
 
(5 intermediate revisions by the same user not shown)
Line 10: Line 10:
 
Extension: [[Documentation/{{documentation/version}}/Extensions/SurfaceReconstruction|SurfaceReconstruction]]<br>
 
Extension: [[Documentation/{{documentation/version}}/Extensions/SurfaceReconstruction|SurfaceReconstruction]]<br>
 
Acknowledgments:
 
Acknowledgments:
This work is part of .<br>
+
This work is based on an implementation of the Poisson surface reconstruction algorithm in the VTK framework, David-Doria Arnaud-Gelas, Rensselaer Polytechnic Institute & Harvard Medical School<br>
Implementation of .<br>
+
 
.<br>
+
Author: Chenxi-Zhang (SPL & FDU)<br>
Author: David-Doria Arnaud-Gelas Michael-Kazhdan Matthew-Bolitho Hugues-Hoppe ({{collaborator|name|}})<br>
+
Contributor1: David-Doria Arnaud-Gelas (Rensselaer Polytechnic Institute & Harvard Medical School)<br>
Contributor1:Chenxi-Zhang ({{collaborator|name|}}) Jean-Christophe Fillion-Robin ({{collaborator|name|kitware}})<br>
+
Contributor2: Michael-Kazhdan Matthew-Bolitho Hugues-Hoppe (Johns Hopkins University)<br>
 +
Contributor3: Jean-Christophe Fillion-Robin ({{collaborator|name|kitware}})<br>
 
Contact: Chenxi-Zhang, <email>chenxizhang@fudan.edu.cn</email><br>
 
Contact: Chenxi-Zhang, <email>chenxizhang@fudan.edu.cn</email><br>
  
Line 21: Line 22:
 
<!-- ---------------------------- -->
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|Module Description}}
 
{{documentation/{{documentation/version}}/module-section|Module Description}}
 
+
A SurfaceReconstruction model produces a surface from a segmented contour. The input is a mask and the output is a surface.
  
  
Line 27: Line 28:
 
{{documentation/{{documentation/version}}/module-section|Use Cases}}
 
{{documentation/{{documentation/version}}/module-section|Use Cases}}
 
{|
 
{|
|[[.png|thumb|340px|Input T1 Image]]
+
|[[Image:InputMask.png|thumb|340px|Input Mask Image]]
|[[Image:.png|thumb|340px|Brain mask as contour]]
+
|[[Image:OutputSurface.png|thumb|250px|Output Surface]]
|[[Image:.png|thumb|375px|Brain surface]]
 
 
|}
 
|}
  
Line 40: Line 40:
 
{|
 
{|
 
|
 
|
|[[Image:.png|thumb|280px|Module UI]]
+
|[[Image:ModuleUI.png|thumb|280px|Module UI]]
 
|}
 
|}
  
Line 48: Line 48:
 
<!-- ---------------------------- -->
 
<!-- ---------------------------- -->
 
{{documentation/{{documentation/version}}/module-section|References}}
 
{{documentation/{{documentation/version}}/module-section|References}}
* Xiaodong Tao, Ming-ching Chang, “A Skull Stripping Method Using Deformable Surface and Tissue Classification”, SPIE Medical Imaging, San Diego, CA, 2010.
+
* David Doria and Arnaud Gelas "Poisson Surface Reconstruction for VTK", http://www.vtkjournal.org/browse/publication/718
* Ming-ching Chang, Xiaodong Tao “Subvoxel Segmentation and Representation of Brain Cortex Using Fuzzy Clustering and Gradient Vector Diffusion”, SPIE Medical Imaging, San Diego, CA, 2010.
+
* Michael Kazhdan, Matthew Bolitho and Hugues Hoppe "Poisson surface reconstruction", Eurographics Symposium on Geometry Processing, 2006.
  
  

Latest revision as of 18:16, 7 May 2014

Home < Documentation < Nightly < Extensions < SurfaceReconstruction


For the latest Slicer documentation, visit the read-the-docs.


Introduction and Acknowledgements

Extension: SurfaceReconstruction
Acknowledgments: This work is based on an implementation of the Poisson surface reconstruction algorithm in the VTK framework, David-Doria Arnaud-Gelas, Rensselaer Polytechnic Institute & Harvard Medical School

Author: Chenxi-Zhang (SPL & FDU)
Contributor1: David-Doria Arnaud-Gelas (Rensselaer Polytechnic Institute & Harvard Medical School)
Contributor2: Michael-Kazhdan Matthew-Bolitho Hugues-Hoppe (Johns Hopkins University)
Contributor3: Jean-Christophe Fillion-Robin (Kitware)
Contact: Chenxi-Zhang, <email>chenxizhang@fudan.edu.cn</email>

Module Description

A SurfaceReconstruction model produces a surface from a segmented contour. The input is a mask and the output is a surface.


Use Cases

Input Mask Image
Output Surface

Tutorials

Panels and their use

Module UI

Similar Modules

References

  • David Doria and Arnaud Gelas "Poisson Surface Reconstruction for VTK", http://www.vtkjournal.org/browse/publication/718
  • Michael Kazhdan, Matthew Bolitho and Hugues Hoppe "Poisson surface reconstruction", Eurographics Symposium on Geometry Processing, 2006.


Information for Developers