Documentation/4.3/Modules/Downsize

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Downsize

Downsize

User Interface

File:InputScanBadResolutionCMFreg.png Input Scan Bad Voxel Based Resolution

Output Scan Downsized General Information Module Type & Category Type: CLI Category: CBCT Scan Registration pre steps Authors, Collaborators & Contact Author: Vinicius Boen Contributors: Francois Budin (NIRAL, University of North Carolina), Martin Styner (NIRAL, University Of North Carolina), Beatriz Paniagua (NIRAL, University Of North Carolina), Lucia Cevidanes (University of Michigan - School of Dentistry) Contact: vboen@umich.edu Module Description Input Parameters: Baseline Scan (fixed) [-f --fixedVolume] : The fixed scan image for registration. Follow up Scan (moving) [-m --movingVolume] : The moving scan image for registration. Baseline Segmentation (fixed) [--fixedBinaryVolume] : The fixed one label segmentation image for registration used to specify the region of interest. Follow up Segmentation (moving) [--movingBinaryVolume] : The moving one label segmentation image for registration used to specify the region of interest. Voxel Based Registration Options: Rigid + Scale (7DOF) [--useScaleVersor3D] : Perform a ScaleVersor3D registration as part of the sequential registration steps. Rigid + Skew + Scale (10DOF) [--useScaleSkewVersor3D] : Perform a ScaleSkewVersor3D registration as part of the sequential registration steps. Affine (12DOF) [--useAffine] : Perform an Affine registration as part of the sequential registration steps. Output Registration Matrix: Registration Matrix [-t --transformPath] : File name for the rigid component of the estimated registration matrix. Can be used to rigidly register the moving image to the fixed image. Apply Registration Matrix: Input Segmentatiton to be Registered [--segmentation] : Input segmentation image to be modified with the registration matrix. Output Registered Scan [--segmentationOut] : Output segmentation image. This segmentaiton image is the 'Input Segmentation to be Registered' with the registration matrix already applied. Output Registered Scan [--outputVolume] : Output image for registration. This image is the Follow up Scan with the registration matrix already applied. User Interface