Difference between revisions of "Modules:Volumes-Documentation"
From Slicer Wiki
| Line 14: | Line 14: | ||
** Window/Level can be set manually or automatically. | ** Window/Level can be set manually or automatically. | ||
** Threshold is a way to make the background black disappear in the 3D view, when slices are turned to visible. | ** Threshold is a way to make the background black disappear in the 3D view, when slices are turned to visible. | ||
| − | ** For labelmaps you can select here the proper look-up table through the Color Select pull-down | + | ** For labelmaps you can select here the proper look-up table through the Color Select pull-down. |
| − | + | ** For DWI volumes you can select a component of the volume to visualize. | |
| + | ** For DWI volumes you can edit the gradient directions usind the Gradient Editor described below. | ||
| + | ** For DTI volumes you can select a scalar drived component of the tenosr volume (such as FA) to visualize. | ||
| + | ** For DTI volumes you can control the tensor glyphs visualization on the slice planes using the Glyph On Slices Display editor described below. | ||
* DWI Gradient Editor | * DWI Gradient Editor | ||
| − | ** Will be described by | + | ** Will be described by Kerstin |
| − | + | * Glyph On Slices Display editor | |
| + | ** Controls the tensor glyphs visibility on individual slices in both 3D and 2D viewers. | ||
| + | ** Selects the scalar to color the glyphs by and the color map to apply. | ||
| + | ** Controls glyphs opacity, glyph type, scale and sampling rate. | ||
* Info | * Info | ||
** Provides some basic information about the Volume | ** Provides some basic information about the Volume | ||
Revision as of 14:56, 10 April 2008
Home < Modules:Volumes-DocumentationReturn to Slicer Documentation
- The Volumes Module loads, saves and adjusts display parameters of volume data.
- Load
- select the volume that you want to load
- If needed edit the name that will be displayed for this volume inside slicer
- If this is a label map, click the box
- Active Volume: determines which volume is manipulated by the Display section. Make sure that you select the Volume that you intend to work on!
- Display
- Allows you to adjust the way that a volume is displayed
- Window/Level can be set manually or automatically.
- Threshold is a way to make the background black disappear in the 3D view, when slices are turned to visible.
- For labelmaps you can select here the proper look-up table through the Color Select pull-down.
- For DWI volumes you can select a component of the volume to visualize.
- For DWI volumes you can edit the gradient directions usind the Gradient Editor described below.
- For DTI volumes you can select a scalar drived component of the tenosr volume (such as FA) to visualize.
- For DTI volumes you can control the tensor glyphs visualization on the slice planes using the Glyph On Slices Display editor described below.
- DWI Gradient Editor
- Will be described by Kerstin
- Glyph On Slices Display editor
- Controls the tensor glyphs visibility on individual slices in both 3D and 2D viewers.
- Selects the scalar to color the glyphs by and the color map to apply.
- Controls glyphs opacity, glyph type, scale and sampling rate.
- Info
- Provides some basic information about the Volume
- Save
- Lets you save a volume. Make sure to provide an extension (such as myvolume.nrrd)
