Difference between revisions of "Modules:PlastimatchDICOMRT"
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* '''Input/Output panel:''' | * '''Input/Output panel:''' | ||
** '''Input DICOM directory:''' Here you choose any file in the directory which contains the DICOM-RT data. | ** '''Input DICOM directory:''' Here you choose any file in the directory which contains the DICOM-RT data. | ||
| − | ** '''Reference Volume (to set size):''' Here you choose any loaded volume. The import module will create a labelmap at the same resolution and pixel spacing as the reference volume that you choose here. | + | ** '''Reference Volume (to set size):''' This is an optional field. But if your dicom directory does not contain a CT, it is required. Here you choose any loaded volume. The import module will create a labelmap at the same resolution and pixel spacing as the reference volume that you choose here. |
| + | ** '''Output Image:''' Here you choose where to put the output CT image. Unless you want to replace an existing volume, you should choose "Create New Volume". | ||
** '''Output Labelmap:''' Here you choose where to put the output labelmap. Unless you want to replace an existing volume, you should choose "Create New Volume". | ** '''Output Labelmap:''' Here you choose where to put the output labelmap. Unless you want to replace an existing volume, you should choose "Create New Volume". | ||
| + | ** '''Output Dose Image:''' Here you choose where to put the output dose image. Unless you want to replace an existing volume, you should choose "Create New Volume". | ||
|[[Image:plastimatch_dicomrt_gui.png|thumb|280px|User Interface]] | |[[Image:plastimatch_dicomrt_gui.png|thumb|280px|User Interface]] | ||
|} | |} | ||
Revision as of 20:13, 8 June 2010
Home < Modules:PlastimatchDICOMRTReturn to Slicer 3.6 Documentation
Plastimatch > DICOM-RT Import
General Information
Module Type & Category
Type: CLI
Category: Plastimatch
Authors, Collaborators & Contact
- Authors: See AUTHORS.TXT contained within the package
- Contact: Greg Sharp, Department of Radiation Oncology, Massachusetts General Hospital (gcsharp@partners.org)
- Web page: http://plastimatch.org
Module Description
This is the DICOM-RT structure set import module. It allows you to select a file containing DICOM-RT structure sets, and it creates a 3D Slicer labelmap volume.
Note: In a Slicer labelmap, a voxel can only belong to one structure. However, DICOM-RT allows a region to belong to any number of strucutres. Therefore, importing DICOM-RT structure sets as Slicer labelmaps will usually result in a loss of data. This module uses a "last structure wins" strategy for assigning labels to overlapping volumes.
Note: Because DICOM-RT structures are specified as polylines, there is a small loss of fidelity when they are converted into rasterized volumes. You may minimizing this effect by creating high resolution lablemaps, such as with 1 mm voxels.
Usage
Tutorials
Quick Tour of Features and Use
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Development
Notes from the Developer(s)
Developer-oriented documentation is found on the plastimatch web site: http://plastimatch.org
Dependencies
This module has no dependencies.
Tests
Plastimatch features approximately 100 test cases.
Known bugs
Usability issues
Please report usability issues to the bug tracker.
Source code & documentation
We recommended to download the latest source code from subversion:
Documentation:
More Information
Acknowledgment
National Institutes of Health
NIH / NCI 6-PO1 CA 21239
Federal share of program income earned by MGH on C06CA059267
Progetto Rocca Foundation
A collaboration between MIT and Politecnico di Milano
References
- G Sharp et al. "Plastimatch - An open source software suite for radiotherapy image processing," Proceedings of the XVIth International Conference on the use of Computers in Radiotherapy, May, 2010.
