Difference between revisions of "Modules:PlastimatchDICOMRT"

From Slicer Wiki
Jump to: navigation, search
Line 39: Line 39:
 
|
 
|
 
* '''Input/Output panel:'''
 
* '''Input/Output panel:'''
−
** '''Fixed Volume:'''  Here you choose the "fixed image", which is the reference image.
+
** '''Input DICOM-RT SS:'''  Here you choose the file which contains a DICOM-RT structure set.
−
** '''Moving Volume:''' Here you choose the "moving image", which will be warped to match the fixed image.
+
** '''Reference Volume:''' Here you choose the "moving image", which will be warped to match the fixed image.
−
** '''Output Volume:''' Here you choose where to put the warped image.  You can replace an existing image in the scene, or create a new image.
+
** '''Output Volume (to set size):''' Here you choose any loaded volume.  The import module will create a labelmap at the same resolution and pixel spacing as the reference volume that you choose here.  This field is required.
−
** '''Cost Function:''' Here you can choose either Mean-squared error (MSE) for unimodal registration, or Mutual Information (MI) for multimodal registration.
+
** '''Output Labelmap:''' Here you choose where to put the output labelmap.  Unless you want to replace an existing volume, you should choose "Create New Volume".
−
** '''Hardware:''' Here you can choose either GPU for CUDA-accelerated registration, or CPU for multicore-accelerated registration.
 
 
|[[Image:plastimatch_dicomrt_gui.png|thumb|280px|User Interface]]
 
|[[Image:plastimatch_dicomrt_gui.png|thumb|280px|User Interface]]
 
|}
 
|}

Revision as of 20:31, 23 May 2010

Home < Modules:PlastimatchDICOMRT

Return to Slicer 3.6 Documentation


Plastimatch > DICOM-RT Import

File:Need image.png
Need Image
File:Need image.png
Need Image

General Information

Module Type & Category

Type: CLI

Category: Plastimatch

Authors, Collaborators & Contact

  • Authors: See AUTHORS.TXT contained within the package
  • Contact: Greg Sharp, Department of Radiation Oncology, Massachusetts General Hospital (gcsharp@partners.org)
  • Web page: http://plastimatch.org

Module Description

This is the DICOM-RT structure set import module. It allows you to select a file containing DICOM-RT structure sets, and it creates a 3D Slicer labelmap.

Usage

Tutorials

File:Need image.png
NEED LINK (Download tutorial)
File:Need image.png
NEED LINK (Download tutorial data)

Quick Tour of Features and Use

  • Input/Output panel:
    • Input DICOM-RT SS: Here you choose the file which contains a DICOM-RT structure set.
    • Reference Volume: Here you choose the "moving image", which will be warped to match the fixed image.
    • Output Volume (to set size): Here you choose any loaded volume. The import module will create a labelmap at the same resolution and pixel spacing as the reference volume that you choose here. This field is required.
    • Output Labelmap: Here you choose where to put the output labelmap. Unless you want to replace an existing volume, you should choose "Create New Volume".
User Interface

Development

Notes from the Developer(s)

Developer-oriented documentation is found on the plastimatch web site: http://plastimatch.org

Dependencies

This module has no dependencies.

Tests

Plastimatch features approximately 100 test cases.

Known bugs

Usability issues

Please report usability issues to the bug tracker.

Source code & documentation

We recommended to download the latest source code from subversion:

Documentation:

More Information

Acknowledgment

National Institutes of Health
NIH / NCI 6-PO1 CA 21239
Federal share of program income earned by MGH on C06CA059267

Progetto Rocca Foundation
A collaboration between MIT and Politecnico di Milano

References

  • G Sharp et al. "Plastimatch - An open source software suite for radiotherapy image processing," Proceedings of the XVIth International Conference on the use of Computers in Radiotherapy, May, 2010.
Retrieved from "https://www.slicer.org/w/index.php?title=Modules:PlastimatchDICOMRT&oldid=16147"