View source for Documentation/Nightly

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<span style="color: #555555; font-size: 18px; font-weight: bold;">Where to start ?</span>
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* [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/getting_started.html Getting started]

:Quick overview about Slicer

*[[Documentation/{{documentation/version}}/Training|Training pages]]

:Information on how to use Slicer {{documentation/version}}

*[[Documentation/{{documentation/version}}/FAQ|FAQ]]

:Set of common questions/answers

*[https://discourse.slicer.org Discussion Forum]

:The most effective way to get help from the community

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<span style="color: #555555; font-size: 18px; font-weight: bold;">How to</span>
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*[[Documentation/{{documentation/version}}/Report a problem|Report a problem]] / [[Documentation/{{documentation/version}}/Create_a_feature_request|Create a feature request]]{{new}}

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{{:{{FULLPAGENAME}}/SlicerApplication}}

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<span style="color: #555555; font-size: 18px; font-weight: bold;">Modules</span>
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[[Image:DataIcon.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/data.html Data]
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[[Image:DataStoreIcon_128.png|32px]] [[{{FULLPAGENAME}}/Modules/DataStore|Data Store]]
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[[Image:DICOM.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/dicom.html DICOM]
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[[Image:Markups.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/markups.html Markups]
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[[Image:SlicerModels-Small.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/models.html Models]
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[[Image:SceneViews.png|32px]] [[{{FULLPAGENAME}}/Modules/SceneViews|Scene Views]]
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[[Image:Segmentations.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/segmentations.html Segmentations]
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[[Image:SegmentEditor.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/segmenteditor.html Segment Editor]
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[[Image:Transforms.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/transforms.html Transforms]
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[[Image:ViewControllersIcon.png|32px]] [[{{FULLPAGENAME}}/Modules/ViewControllers|View Controllers]]
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[[Image:VolumeRendering.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/volumerendering.html Volume Rendering]
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[[Image:SlicerVolume-Small.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/volumes.html Volumes]
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[[Image:Welcome.png|32px]] [[{{FULLPAGENAME}}/Modules/Welcome|Welcome to Slicer]]
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{{:{{FULLPAGENAME}}/ModuleExtensionListing/TOC}}

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<span style="color: #555555; font-size: 18px; font-weight: bold;">Developers Corner</span>
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*[[Documentation/Nightly/Developers | Information for Software Developers]]{{updated}}

:Source code, contribute patch, develop modules

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<span style="color: #555555; font-size: 18px; font-weight: bold;">Miscellaneous</span>
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*[[Documentation/{{documentation/version}}/HowTo|Documentation guidelines]]

:Slicer user documentation principle and guidelines

*[[Slicer4:VisualBlog|Visual blog]]

:Set of screenshots showing Slicer in action.

*[[Documentation/{{documentation/version}}/ReleaseNotes|Release Notes]]

:Platform specific issues and considerations

*[[Documentation/{{documentation/version}}/Announcements|Announcements]] & [[Documentation/{{documentation/version}}/Acknowledgments|Acknowledgments]]

*[[Documentation/Nightly/Registration/RegistrationLibrary|Registration Library]]

:Real-life example cases of using the Slicer registration tools,  incl. datasets and step-by-step instructions to follow and try yourself.

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<span style="color: #555555; font-size: 18px; font-weight: bold;">Documentation in other languages</span>
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{{:{{FULLPAGENAME}}/Lang/ES}}

 

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<br />
<br />
=Modules by category=

==Converters==

*[[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOM Series]]    <small>(cli)</small>

==Diffusion==

*[[Documentation/Nightly/Modules/DMRIInstall|DMRI Install]]    <small>(scripted)</small>

<span id="Modules_by_category_Diffusion_Diffusion_Data_Conversion"></span>
===Diffusion Data Conversion===

*DWI Convert    <small>(cli)</small>

<span id="Modules_by_category_Diffusion_Diffusion_Tensor_Images"></span>
===Diffusion Weighted Images===

*BRAINS DWI Cleanup    <small>(cli)</small>

<span id="Modules_by_category_Diffusion_Import_and_Export"></span>
===Import and Export===

*DWI Convert    <small>(cli)</small>

<span id="Modules_by_category_Diffusion_Process"></span>
===Utilities===

*BRAINS DWI Cleanup    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTI Volume]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWI Volume]]    <small>(cli)</small>

<span id="Modules_by_category_Endoscopy"></span>
==Endoscopy==

*[[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted)</small>

<span id="Modules_by_category_Filter"></span>
==Filter==

*IslandRemoval    <small>(cli)</small>

<span id="Modules_by_category_Filtering"></span>
==Filtering==

*[[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4 ITK Bias Field Correction]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli)</small>

<span id="Modules_by_category_Filtering_Arithmetic"></span>
===Arithmetic===

*[[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli)</small>

<span id="Modules_by_category_Filtering_Denoising"></span>
===Denoising===

*[[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli)</small>

<span id="Modules_by_category_Filtering_Morphology"></span>
===Morphology===

*[[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli)</small>

<span id="Modules_by_category_IGT"></span>
==IGT==

*[[Documentation/Nightly/Modules/OpenIGTLinkIF|OpenIGTLink IF]]    <small>(loadable)</small>

<span id="Modules_by_category_Informatics"></span>
==Informatics==

*[[Documentation/Nightly/Modules/SEG2NRRD|SEG 2 NRRD]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/Tables|Tables]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable)</small>
*DumpSEGFrame    <small>(cli)</small>
*[[Documentation/Nightly/Modules/Terminologies|Terminologies]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable)</small>
*[{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/dicom.html DICOM]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable)</small>

<span id="Modules_by_category_Informatics_Converters"></span>
===Converters===

*[[Documentation/Nightly/Modules/EncodeSEG|Encode SEG]]    <small>(cli)</small>

<span id="Modules_by_category_Legacy"></span>
==Legacy==
<span id="Modules_by_category_Legacy_Converters"></span>
===Converters===

*[[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli)</small>

<span id="Modules_by_category_Legacy_Filtering"></span>
===Filtering===

*[[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli)</small>

<span id="Modules_by_category_Legacy_Registration"></span>
===Registration===

*Test Grid Transform Registration    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli)</small>

==MultiVolume Support==

*[[Documentation/Nightly/Modules/MultiVolumeImporter|MultiVolume Importer]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/MultiVolumeExplorer|MultiVolume Explorer]]    <small>(loadable)</small>

<span id="Modules_by_category_Quantification"></span>
==Quantification==

*[[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PET Standard Uptake Value Computation]]    <small>(cli)</small>
*SegmentStatistics    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/LabelStatistics|Label Statistics]]    <small>(scripted)</small>
*BRAINSLabelStats    <small>(cli)</small>
*[[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted)</small>

<span id="Modules_by_category_Registration"></span>
==Registration==

*[[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable)</small>
*BRAINSResize    <small>(cli)</small>
*PerformMetricTest    <small>(cli)</small>
*[[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/BRAINSResample|BRAINS Resample]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/BRAINSFit|General registration (BRAINS)]]    <small>(cli)</small>

<span id="Modules_by_category_Registration_Specialized"></span>
===Specialized===

*[[Documentation/Nightly/Modules/ACPCTransform|AC-PC Transform]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINS Demon Warp]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable)</small>
*VBRAINSDemonWarp    <small>(cli)</small>

<span id="Modules_by_category_Segmentation"></span>
==Segmentation==

*[[Documentation/Nightly/Modules/Segmentations|Segmentations]]    <small>(loadable)</small>
*[{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/segmenteditor.html Segment Editor]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/Editor|Editor]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable)</small>

*EMSegmentQuick    <small>(loadable)</small>

<span id="Modules_by_category_Segmentation_Specialized"></span>
===Specialized===

*BRAINS ROI Auto    <small>(cli)</small>
*[[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli)</small>
*EMSegment CommandLine    <small>(cli)</small>

<span id="Modules_by_category_Surface_Models"></span>

==Surface Models==

*[[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ModelToLabelMap|Model To LabelMap]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/LabelMapSmoothing|LabelMap Smoothing]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli)</small>

<span id="Modules_by_category_Utilities"></span>
==Utilities==

*[[Documentation/Nightly/Modules/ScreenCapture|Screen Capture]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable)</small>
*[{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/dicompatcher.html DICOM Patcher]    <small>(scripted)</small>
*BRAINS Strip Rotation    <small>(cli)</small>
*EMSegment Transform To New Format    <small>(cli)</small>

<span id="Modules_by_category_Utilities_BRAINS"></span>
===BRAINS===

*BRAINS Transform Convert    <small>(cli)</small>

<span id="Modules_by_category_Wizards"></span>
==Wizards==

*[[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted)</small>

<span id="Modules_by_category_Developer_Tools"></span>
==Developer Tools==

*[[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable)</small>
*[[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli)</small>
*[[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted)</small>
*[[Documentation/Nightly/Modules/EventBroker|Event Broker]]
*Double Arrays    <small>(loadable)</small>

<span id="Modules_by_category_Developer_Tools_DICOM_Plugins"></span>
===DICOM Plugins===

*DICOMParametricMapPlugin
*DicomUltrasoundPlugin
*DICOMSegmentationPlugin
*DICOMSlicerDataBundlePlugin
*DICOMTID1500Plugin
*[[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
*DICOMScalarVolumePlugin
*DICOMDiffusionVolumePlugin
*DICOMLongitudinalPETCTPlugin
*DicomSroImportPlugin
*[[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
*DicomRtImportExportPlugin
*MultiVolumeImporterPlugin

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