View source for Documentation/Nightly/Modules/ScarVisualization

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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
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Author: Salma Bengali, CARMA Center, University of Utah<br>
Contributors: Alan Morris, Josh Cates, Rob MacLeod, CARMA Center, University of Utah<br>	
Contact: Salma Bengali: <email>salma.bengali@carma.utah.edu</email> <br>
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{{documentation/{{documentation/version}}/module-section|Module Description}}
This module can be used to threshold a model of the left atrium. It requires an input LGE-MRI image, an endocardium segmentation and a wall segmentation. The wall model can be thresholded in order to visualize regions of scar.
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{{documentation/{{documentation/version}}/module-section|Use Cases}}
This module is meant to be used to threshold the wall model produced from the wall segmentation of the left atrium. 
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[[Media:CMRToolkit_Threshold_Model_Tutorial.pptx|Threshold Model Tutorial]]

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* Input Image Volume : Select an LGE-MRI image
* Endo Label Map : Select the endo segmentation
* Wall Label Map : Select the wall segmentation
* Input Wall Model : Select the wall model created by the module
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{{documentation/{{documentation/version}}/module-section|Information for Developers}}
The source code for this module can be found at the [https://github.com/carma-center/carma_slicer_extension/ CARMA GitHub repository].


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