#include <Modules/Loadable/TractographyDisplay/MRML/vtkMRMLFiberBundleDisplayNode.h>

Inheritance diagram for vtkMRMLFiberBundleDisplayNode:

Collaboration diagram for vtkMRMLFiberBundleDisplayNode:

Public Types
enum	{ colorModeSolid = 0, colorModeScalar = 1, colorModeFunctionOfScalar = 2, colorModeUseCellScalars = 3, colorModeScalarData = 4, colorModePointFiberOrientation = 5, colorModeMeanFiberOrientation = 6 }
	Display Information: Geometry to display (not mutually exclusive) More...
typedef vtkMRMLModelDisplayNode	Superclass
Public Member Functions
virtual void	Copy (vtkMRMLNode *node)
virtual const char *	GetClassName ()
virtual int	GetColorMode ()
	Display Information: ColorMode for ALL nodes.
vtkMRMLDiffusionTensorDisplayPropertiesNode *	GetDiffusionTensorDisplayPropertiesNode ()
	Display Information: ColorMode for glyphs.
virtual char *	GetDiffusionTensorDisplayPropertiesNodeID ()
virtual const char *	GetNodeTagName ()=0
virtual int	IsA (const char *type)
void	PrintSelf (ostream &os, vtkIndent indent)
virtual void	ReadXMLAttributes (const char **atts)
	MRMLNode methods.
void	SetAndObserveDiffusionTensorDisplayPropertiesNodeID (const char *ID)
virtual void	SetColorMode (int)
void	SetColorModeToFunctionOfScalar ()
void	SetColorModeToMeanFiberOrientation ()
void	SetColorModeToPointFiberOrientation ()
void	SetColorModeToScalar ()
void	SetColorModeToScalarData ()
void	SetColorModeToSolid ()
void	SetColorModeToUseCellScalars ()
virtual void	UpdateReferenceID (const char oldID, const char newID)
virtual void	UpdateReferences ()
virtual void	UpdateScene (vtkMRMLScene *scene)
virtual void	WriteXML (ostream &of, int indent)
Static Public Member Functions
static int	GetNthScalarInvariant (int i)
static int	GetNumberOfScalarInvariants ()
static int	IsTypeOf (const char *type)
static vtkMRMLFiberBundleDisplayNode *	SafeDownCast (vtkObject *o)
Protected Member Functions
void	operator= (const vtkMRMLFiberBundleDisplayNode &)
virtual void	SetDiffusionTensorDisplayPropertiesNodeID (const char *id)
	vtkMRMLFiberBundleDisplayNode ()
	vtkMRMLFiberBundleDisplayNode (const vtkMRMLFiberBundleDisplayNode &)
	~vtkMRMLFiberBundleDisplayNode ()
Static Protected Member Functions
static std::vector< int >	GetSupportedColorModes ()
	ALL MRML nodes.
Protected Attributes
int	ColorMode
	Enumerated.
vtkMRMLDiffusionTensorDisplayPropertiesNode *	DiffusionTensorDisplayPropertiesNode
	ALL MRML nodes.
char *	DiffusionTensorDisplayPropertiesNodeID

Detailed Description

Definition at line 33 of file vtkMRMLFiberBundleDisplayNode.h.

Member Typedef Documentation

typedef vtkMRMLModelDisplayNode vtkMRMLFiberBundleDisplayNode::Superclass

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

Definition at line 36 of file vtkMRMLFiberBundleDisplayNode.h.

Member Enumeration Documentation

anonymous enum

Display Information: Geometry to display (not mutually exclusive)

Display Information: Color Mode 0) solid color by group 1) color by scalar invariant 2) color by avg scalar invariant 3) color by other

Enumerator:

colorModeSolid
colorModeScalar
colorModeFunctionOfScalar
colorModeUseCellScalars
colorModeScalarData
colorModePointFiberOrientation
colorModeMeanFiberOrientation

Definition at line 84 of file vtkMRMLFiberBundleDisplayNode.h.

Constructor & Destructor Documentation

vtkMRMLFiberBundleDisplayNode::vtkMRMLFiberBundleDisplayNode ( ) [protected]

vtkMRMLFiberBundleDisplayNode::~vtkMRMLFiberBundleDisplayNode ( ) [protected]

vtkMRMLFiberBundleDisplayNode::vtkMRMLFiberBundleDisplayNode ( const vtkMRMLFiberBundleDisplayNode & ) [protected]

Member Function Documentation

virtual void vtkMRMLFiberBundleDisplayNode::Copy ( vtkMRMLNode * node ) [virtual]

Copy the node's attributes to this object

Reimplemented from vtkMRMLDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

virtual const char* vtkMRMLFiberBundleDisplayNode::GetClassName ( ) [virtual]

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

virtual int vtkMRMLFiberBundleDisplayNode::GetColorMode ( ) [virtual]

Display Information: ColorMode for ALL nodes.

Description: Color mode for glyphs. The color modes are mutually exclusive.

vtkMRMLDiffusionTensorDisplayPropertiesNode* vtkMRMLFiberBundleDisplayNode::GetDiffusionTensorDisplayPropertiesNode ( )

Display Information: ColorMode for glyphs.

MRML nodes that are observed Node reference to ALL DT nodes Get diffusion tensor display MRML object for fiber glyph.

virtual char* vtkMRMLFiberBundleDisplayNode::GetDiffusionTensorDisplayPropertiesNodeID ( ) [virtual]

Get ID of diffusion tensor display MRML object for fiber glyph.

virtual const char* vtkMRMLFiberBundleDisplayNode::GetNodeTagName ( ) [pure virtual]

Get node XML tag name (like Volume, FiberBundle)

Reimplemented from vtkMRMLModelDisplayNode.

Implemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

static int vtkMRMLFiberBundleDisplayNode::GetNthScalarInvariant ( int i ) [static]

static int vtkMRMLFiberBundleDisplayNode::GetNumberOfScalarInvariants ( ) [static]

static std::vector<int> vtkMRMLFiberBundleDisplayNode::GetSupportedColorModes ( ) [static, protected]

ALL MRML nodes.

virtual int vtkMRMLFiberBundleDisplayNode::IsA ( const char * type ) [virtual]

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

static int vtkMRMLFiberBundleDisplayNode::IsTypeOf ( const char * type ) [static]

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

void vtkMRMLFiberBundleDisplayNode::operator= ( const vtkMRMLFiberBundleDisplayNode & ) [protected]

void vtkMRMLFiberBundleDisplayNode::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

Reimplemented from vtkMRMLDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

virtual void vtkMRMLFiberBundleDisplayNode::ReadXMLAttributes ( const char ** atts ) [virtual]

MRMLNode methods.

Read node attributes from XML (MRML) file

Reimplemented from vtkMRMLDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

static vtkMRMLFiberBundleDisplayNode* vtkMRMLFiberBundleDisplayNode::SafeDownCast ( vtkObject * o ) [static]

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLFiberBundleGlyphDisplayNode, vtkMRMLFiberBundleLineDisplayNode, and vtkMRMLFiberBundleTubeDisplayNode.

void vtkMRMLFiberBundleDisplayNode::SetAndObserveDiffusionTensorDisplayPropertiesNodeID ( const char * ID )

Set diffusion tensor display MRML object for fiber glyph.

virtual void vtkMRMLFiberBundleDisplayNode::SetColorMode ( int ) [virtual]

void vtkMRMLFiberBundleDisplayNode::SetColorModeToFunctionOfScalar ( ) [inline]

Color according to the tensors using a function of scalar invariants along the tract. This enables coloring by average FA, for example.

Definition at line 119 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToMeanFiberOrientation ( ) [inline]

Color according to the mean orientation of the fiber calculated from the orientation of the segment original fiber bundle node.

Definition at line 144 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToPointFiberOrientation ( ) [inline]

Color according to the segment orientation of the fiber calculated from the orientation of the segment original fiber bundle node.

Definition at line 151 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToScalar ( ) [inline]

Color according to the tensors using various scalar invariants.

Definition at line 112 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToScalarData ( ) [inline]

Color according to the tensors using scalars (not calculated from tensors) from the original fiber bundle node.

Definition at line 137 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToSolid ( ) [inline]

Color by solid color (for example the whole fiber bundle red. blue, etc.)

Definition at line 106 of file vtkMRMLFiberBundleDisplayNode.h.

void vtkMRMLFiberBundleDisplayNode::SetColorModeToUseCellScalars ( ) [inline]

Use to color by the active cell scalars. This is intended to support external processing of fibers, for example to label each with the distance of that fiber from an fMRI activation. Then by making that information the active cell scalar field, this will allow coloring by that information. TO DO: make sure this information can be saved with the tract, save name of active scalar field if needed.

Definition at line 130 of file vtkMRMLFiberBundleDisplayNode.h.

virtual void vtkMRMLFiberBundleDisplayNode::SetDiffusionTensorDisplayPropertiesNodeID ( const char * id ) [protected, virtual]