itk::OtsuStatistics< TInputImage, TOutputImage > Class Template Reference

Applies a LMMSE filtering for Rician noise removal. More...

#include <Modules/CLI/DWIJointRicianLMMSEFilter/itkOtsuStatistics.h>

List of all members.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< const Self >	ConstPointer
typedef itk::Array< unsigned int >	IndicatorType
typedef itk::Array< unsigned int >	IndicatorType
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef InputImageType::RegionType	InputImageRegionType
typedef TInputImage	InputImageType
typedef TInputImage	InputImageType
typedef InputImageType::PixelType	InputPixelType
typedef InputImageType::PixelType	InputPixelType
typedef InputImageType::SizeType	InputSizeType
typedef InputImageType::SizeType	InputSizeType
enum	OperationMode {   USE_AVERAGED_BASELINES, USE_AVERAGED_GRADIENTS, USE_NEIGHBORHOOD_BASELINES, USE_NEIGHBORHOOD_GRADIENTS,   USE_AVERAGED_BASELINES, USE_AVERAGED_GRADIENTS, USE_NEIGHBORHOOD_BASELINES, USE_NEIGHBORHOOD_GRADIENTS }
typedef enum itk::OtsuStatistics::OperationMode	OperationMode
typedef enum itk::OtsuStatistics::OperationMode	OperationMode
enum	OperationMode {   USE_AVERAGED_BASELINES, USE_AVERAGED_GRADIENTS, USE_NEIGHBORHOOD_BASELINES, USE_NEIGHBORHOOD_GRADIENTS,   USE_AVERAGED_BASELINES, USE_AVERAGED_GRADIENTS, USE_NEIGHBORHOOD_BASELINES, USE_NEIGHBORHOOD_GRADIENTS }
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TOutputImage	OutputImageType
typedef TOutputImage	OutputImageType
typedef OutputImageType::PixelType	OutputPixelType
typedef OutputImageType::PixelType	OutputPixelType
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< Self >	Pointer
typedef OtsuStatistics	Self
typedef OtsuStatistics	Self
typedef ImageToImageFilter < InputImageType, OutputImageType >	Superclass
typedef ImageToImageFilter < InputImageType, OutputImageType >	Superclass
Public Member Functions
	itkGetConstReferenceMacro (Radius, InputSizeType)
	itkGetConstReferenceMacro (Radius, InputSizeType)
	itkGetConstReferenceMacro (Channels, unsigned int)
	itkGetConstReferenceMacro (Channels, unsigned int)
	itkGetMacro (Min, double)
	itkGetMacro (Max, double)
	itkGetMacro (Min, double)
	itkGetMacro (Indicator, IndicatorType)
	itkGetMacro (Max, double)
	itkGetMacro (Indicator, IndicatorType)
	itkNewMacro (Self)
	itkNewMacro (Self)
	itkSetMacro (Indicator, IndicatorType)
	itkSetMacro (Radius, InputSizeType)
	itkSetMacro (Radius, InputSizeType)
	itkSetMacro (Channels, unsigned int)
	itkSetMacro (Channels, unsigned int)
	itkSetMacro (Indicator, IndicatorType)
	itkTypeMacro (OtsuStatistics, ImageToImageFilter)
	itkTypeMacro (OtsuStatistics, ImageToImageFilter)
void	SetRadius (unsigned int rad)
void	SetRadius (unsigned int rad)
void	SetUseAveragedBaselines (void)
void	SetUseAveragedBaselines (void)
void	SetUseAveragedGradients (void)
void	SetUseAveragedGradients (void)
void	SetUseNeighborhoodBaselines (void)
void	SetUseNeighborhoodBaselines (void)
void	SetUseNeighborhoodGradients (void)
void	SetUseNeighborhoodGradients (void)
Protected Member Functions
void	AfterThreadedGenerateData (void)
void	AfterThreadedGenerateData (void)
void	BeforeThreadedGenerateData (void)
void	BeforeThreadedGenerateData (void)
virtual void	GenerateInputRequestedRegion () throw (InvalidRequestedRegionError)
virtual void	GenerateInputRequestedRegion () throw (InvalidRequestedRegionError)
	OtsuStatistics ()
	OtsuStatistics ()
void	PrintSelf (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const
void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, int threadId)
void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, int threadId)
virtual	~OtsuStatistics ()
virtual	~OtsuStatistics ()

---

Detailed Description

template<class TInputImage, class TOutputImage>
class itk::OtsuStatistics< TInputImage, TOutputImage >

Applies a LMMSE filtering for Rician noise removal.

Definition at line 22 of file itkOtsuStatistics.h.

---

Member Typedef Documentation

template<class TInputImage , class TOutputImage >

typedef SmartPointer<const Self> itk::OtsuStatistics< TInputImage, TOutputImage >::ConstPointer

Definition at line 37 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef SmartPointer<const Self> itk::OtsuStatistics< TInputImage, TOutputImage >::ConstPointer

Definition at line 37 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef itk::Array<unsigned int> itk::OtsuStatistics< TInputImage, TOutputImage >::IndicatorType

Definition at line 54 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef itk::Array<unsigned int> itk::OtsuStatistics< TInputImage, TOutputImage >::IndicatorType

Definition at line 54 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::ConstPointer itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageConstPointer

Definition at line 28 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::ConstPointer itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageConstPointer

Definition at line 28 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::Pointer itk::OtsuStatistics< TInputImage, TOutputImage >::InputImagePointer

Definition at line 27 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::Pointer itk::OtsuStatistics< TInputImage, TOutputImage >::InputImagePointer

Definition at line 27 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::RegionType itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageRegionType

Definition at line 49 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::RegionType itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageRegionType

Definition at line 49 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef TInputImage itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageType

Convenient typedefs for simplifying declarations.

Definition at line 26 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef TInputImage itk::OtsuStatistics< TInputImage, TOutputImage >::InputImageType

Convenient typedefs for simplifying declarations.

Definition at line 26 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::PixelType itk::OtsuStatistics< TInputImage, TOutputImage >::InputPixelType

Image typedef support.

Definition at line 46 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::PixelType itk::OtsuStatistics< TInputImage, TOutputImage >::InputPixelType

Image typedef support.

Definition at line 46 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::SizeType itk::OtsuStatistics< TInputImage, TOutputImage >::InputSizeType

Definition at line 52 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::SizeType itk::OtsuStatistics< TInputImage, TOutputImage >::InputSizeType

Definition at line 52 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef enum itk::OtsuStatistics::OperationMode itk::OtsuStatistics< TInputImage, TOutputImage >::OperationMode

template<class TInputImage , class TOutputImage >

typedef enum itk::OtsuStatistics::OperationMode itk::OtsuStatistics< TInputImage, TOutputImage >::OperationMode

template<class TInputImage , class TOutputImage >

typedef OutputImageType::ConstPointer itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageConstPointer

Definition at line 31 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::ConstPointer itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageConstPointer

Definition at line 31 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::Pointer itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImagePointer

Definition at line 30 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::Pointer itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImagePointer

Definition at line 30 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::RegionType itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageRegionType

Definition at line 50 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::RegionType itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageRegionType

Definition at line 50 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef TOutputImage itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageType

Definition at line 29 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef TOutputImage itk::OtsuStatistics< TInputImage, TOutputImage >::OutputImageType

Definition at line 29 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::PixelType itk::OtsuStatistics< TInputImage, TOutputImage >::OutputPixelType

Definition at line 47 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OutputImageType::PixelType itk::OtsuStatistics< TInputImage, TOutputImage >::OutputPixelType

Definition at line 47 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef SmartPointer<Self> itk::OtsuStatistics< TInputImage, TOutputImage >::Pointer

Definition at line 36 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef SmartPointer<Self> itk::OtsuStatistics< TInputImage, TOutputImage >::Pointer

Definition at line 36 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OtsuStatistics itk::OtsuStatistics< TInputImage, TOutputImage >::Self

Standard class typedefs.

Definition at line 34 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef OtsuStatistics itk::OtsuStatistics< TInputImage, TOutputImage >::Self

Standard class typedefs.

Definition at line 34 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef ImageToImageFilter<InputImageType, OutputImageType> itk::OtsuStatistics< TInputImage, TOutputImage >::Superclass

Definition at line 35 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

typedef ImageToImageFilter<InputImageType, OutputImageType> itk::OtsuStatistics< TInputImage, TOutputImage >::Superclass

Definition at line 35 of file itkOtsuStatistics.h.

---

Member Enumeration Documentation

template<class TInputImage , class TOutputImage >

enum itk::OtsuStatistics::OperationMode

Enumerator:

USE_AVERAGED_BASELINES
USE_AVERAGED_GRADIENTS
USE_NEIGHBORHOOD_BASELINES
USE_NEIGHBORHOOD_GRADIENTS
USE_AVERAGED_BASELINES
USE_AVERAGED_GRADIENTS
USE_NEIGHBORHOOD_BASELINES
USE_NEIGHBORHOOD_GRADIENTS

Definition at line 67 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

enum itk::OtsuStatistics::OperationMode

Enumerator:

USE_AVERAGED_BASELINES
USE_AVERAGED_GRADIENTS
USE_NEIGHBORHOOD_BASELINES
USE_NEIGHBORHOOD_GRADIENTS
USE_AVERAGED_BASELINES
USE_AVERAGED_GRADIENTS
USE_NEIGHBORHOOD_BASELINES
USE_NEIGHBORHOOD_GRADIENTS

Definition at line 67 of file itkOtsuStatistics.h.

---

Constructor & Destructor Documentation

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::OtsuStatistics

(

)

[protected]

template<class TInputImage , class TOutputImage >

virtual itk::OtsuStatistics< TInputImage, TOutputImage >::~OtsuStatistics

(

)

[inline, protected, virtual]

Definition at line 92 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::OtsuStatistics

(

)

[protected]

template<class TInputImage , class TOutputImage >

virtual itk::OtsuStatistics< TInputImage, TOutputImage >::~OtsuStatistics

(

)

[inline, protected, virtual]

Definition at line 92 of file itkOtsuStatistics.h.

---

Member Function Documentation

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::AfterThreadedGenerateData

(

void

)

[protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::AfterThreadedGenerateData

(

void

)

[protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::BeforeThreadedGenerateData

(

void

)

[protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::BeforeThreadedGenerateData

(

void

)

[protected]

template<class TInputImage , class TOutputImage >

virtual void itk::OtsuStatistics< TInputImage, TOutputImage >::GenerateInputRequestedRegion

(

)

throw (InvalidRequestedRegionError) [protected, virtual]

template<class TInputImage , class TOutputImage >

virtual void itk::OtsuStatistics< TInputImage, TOutputImage >::GenerateInputRequestedRegion

(

)

throw (InvalidRequestedRegionError) [protected, virtual]

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetConstReferenceMacro	(	Radius	,
		InputSizeType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetConstReferenceMacro	(	Channels	,
		unsigned	int
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetConstReferenceMacro	(	Radius	,
		InputSizeType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetConstReferenceMacro	(	Channels	,
		unsigned	int
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Min	,
		double
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Max	,
		double
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Indicator	,
		IndicatorType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Min	,
		double
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Max	,
		double
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkGetMacro	(	Indicator	,
		IndicatorType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkNewMacro

(

Self

)

Method for creation through the object factory.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkNewMacro

(

Self

)

Method for creation through the object factory.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Indicator	,
		IndicatorType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Radius	,
		InputSizeType
	)

Set and get the radius of the neighborhood used to compute the statistics.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Channels	,
		unsigned	int
	)

Set and get the number of DWI channels.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Channels	,
		unsigned	int
	)

Set and get the number of DWI channels.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Indicator	,
		IndicatorType
	)

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkSetMacro	(	Radius	,
		InputSizeType
	)

Set and get the radius of the neighborhood used to compute the statistics.

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkTypeMacro	(	OtsuStatistics< TInputImage, TOutputImage >	,
		ImageToImageFilter
	)

Run-time type information (and related methods).

template<class TInputImage , class TOutputImage >

itk::OtsuStatistics< TInputImage, TOutputImage >::itkTypeMacro	(	OtsuStatistics< TInputImage, TOutputImage >	,
		ImageToImageFilter
	)

Run-time type information (and related methods).

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const [protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const [protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetRadius

(

unsigned int

rad

)

[inline]

Definition at line 59 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetRadius

(

unsigned int

rad

)

[inline]

Definition at line 59 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseAveragedBaselines

(

void

)

[inline]

Definition at line 69 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseAveragedBaselines

(

void

)

[inline]

Definition at line 69 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseAveragedGradients

(

void

)

[inline]

Definition at line 73 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseAveragedGradients

(

void

)

[inline]

Definition at line 73 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseNeighborhoodBaselines

(

void

)

[inline]

Definition at line 77 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseNeighborhoodBaselines

(

void

)

[inline]

Definition at line 77 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseNeighborhoodGradients

(

void

)

[inline]

Definition at line 81 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::SetUseNeighborhoodGradients

(

void

)

[inline]

Definition at line 81 of file itkOtsuStatistics.h.

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::ThreadedGenerateData	(	const OutputImageRegionType &	outputRegionForThread,
		int	threadId
	)		[protected]

template<class TInputImage , class TOutputImage >

void itk::OtsuStatistics< TInputImage, TOutputImage >::ThreadedGenerateData	(	const OutputImageRegionType &	outputRegionForThread,
		int	threadId
	)		[protected]

---

The documentation for this class was generated from the following files:

• Modules/CLI/DWIJointRicianLMMSEFilter/itkOtsuStatistics.h
• Modules/CLI/DWIUnbiasedNonLocalMeansFilter/itkOtsuStatistics.h